BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg948060 Length=328 Score E Sequences producing significant alignments: (Bits) Value AT5G54140.1 | Symbols: ILL3 | IAA-leucine-resistant (ILR1)-like... 278 3e-74 > AT5G54140.1 | Symbols: ILL3 | IAA-leucine-resistant (ILR1)-like 3 | chr5:21965833-21968061 FORWARD LENGTH=1514 Length=1514 Score = 278 bits (150), Expect = 3e-74 Identities = 187/205 (91%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 107 TGAAGGACAAGCTGATGTACATAGATGCAAAATGGATATAGATGTGCATGAAGACGATCA 166 ||||||||||||||| ||||| ||||||||| |||||||||| |||||||||||||||| Sbjct 906 TGAAGGACAAGCTGAAGTACAAAGATGCAAAGCGGATATAGATATGCATGAAGACGATCA 965 Query 167 TCCTATGTATCCAGCAACACTGAACGATCCCAAGCTACACGAATACGCTGAAAATGTTTT 226 ||||||||||||||||||| ||||||||| |||||||||||||| | ||||||| ||||| Sbjct 966 TCCTATGTATCCAGCAACAGTGAACGATCACAAGCTACACGAATTCACTGAAAAGGTTTT 1025 Query 227 AAAACTCTTGCTTGGACCCGAGAAAGTAAAACCGTG-TGGCAAGGTAATGGCGGGTGAGG 285 ||||||||||||||||||||||| || |||||| | | |||||||||||||||||||| Sbjct 1026 GAAACTCTTGCTTGGACCCGAGAAGGTGAAACCG-GCTAACAAGGTAATGGCGGGTGAGG 1084 Query 286 ATTTTGCTTTCTATCAACAATAAAT 310 |||||||||||||||||||| |||| Sbjct 1085 ATTTTGCTTTCTATCAACAAAAAAT 1109 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 15281395696 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5