BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg948161
Length=2950
Score E
Sequences producing significant alignments: (Bits) Value
AT5G47480.1 | Symbols: | RGPR-related | chr5:19257420-19263424... 1581 0.0
AT5G47490.1 | Symbols: | RGPR-related | chr5:19264675-19270800... 878 0.0
AT2G31751.1 | Symbols: | unknown gene | chr2:13499341-13502114... 141 4e-32
> AT5G47480.1 | Symbols: | RGPR-related | chr5:19257420-19263424
FORWARD LENGTH=4345
Length=4345
Score = 1581 bits (856), Expect = 0.0
Identities = 1080/1182 (91%), Gaps = 40/1182 (3%)
Strand=Plus/Plus
Query 1551 GGGGAAGACTCTTTGAGCTACTTTCGTTGCCTGCATCAACAATCTCTTCCAGGTCCTTTG 1610
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 1729 GGGGAAGACTCTTTGAGCTACTTTCGTTGTCTGCATCAACAATCTCTTCCAGGCCCTTTG 1788
Query 1611 GTAGGAGGAAATGTTGGAAGTAAAGAGTTGCATAAGTGGATTGATGAGAGAATTTTGAAT 1670
||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||| ||
Sbjct 1789 GTAGGGGGAAATGTTGGAAGTAAAGAGTTGCATAAGTGGATTGATGAGAGACTCTTGCAT 1848
Query 1671 TGTGAATCTTCCTATATGGATTTTTCAAGAGGGAAACTCTTAAAGATGCTTCTTTCTTTA 1730
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1849 TGTGAATCTTCCAACATGGATTTTTCAAGAGGGAAACTCTTAAAGATGCTTCTTTCTTTG 1908
Query 1731 CTCAGAATATCTTATCAGTATTATGGGAAACTCCGTTCTCCTTTTGG-TACTGATGCATC 1789
||||||||||||| ||||||||||||||||||||| ||||||||||| | ||||||||||
Sbjct 1909 CTCAGAATATCTTGTCAGTATTATGGGAAACTCCGATCTCCTTTTGGCT-CTGATGCATC 1967
Query 1790 ACAAAAGGAAACGGACT-CTGCTGAAGCAGCAGTCGCTAAGCTTTTTGCATTTGCCAAGA 1848
|||||||||||||| | || | ||||||||||| ||||| |||||||||||||||||||
Sbjct 1968 GCAAAAGGAAACGGA-TACTCCAGAAGCAGCAGTTGCTAAACTTTTTGCATTTGCCAAGA 2026
Query 1849 AAGATGGCGTACAAAATGGTTATGCTCCTATTAGCCAATGCTTGCAGTATTTACCACCTG 1908
|||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2027 AAGATGGCATCCAAAATGGTTATGCTCCTATTAGCCAATGCTTGCAGCATTTACCACCTG 2086
Query 1909 AATCACAAATGCAAGTAACTGCTTCAGAGGTTCAGAATCTTCTGGCTTCTGGTAGAAAAA 1968
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2087 AATCGCAAATGCAAGTAACTGCTTCAGAGGTTCAGAATCTTCTGGCTTCTGGTAGAAAAA 2146
Query 1969 TGGAGGCTCTACAATGTGCACAAGATGGCCATTTATGGGGACCAGCGCTTGTTATCGCGG 2028
||||||||||||||||||| ||||| ||||||||||||||||| || ||||| |||||||
Sbjct 2147 TGGAGGCTCTACAATGTGCGCAAGAAGGCCATTTATGGGGACCGGCACTTGTCATCGCGG 2206
Query 2029 CACAACTTGGGGATCAGTTCTATGTTGACACTGTGAAACAAATGGCCCTTCGCCAGCTGA 2088
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2207 CTCAACTTGGGGATCAGTTCTATGTAGACACTGTGAAACAAATGGCCCTTCGCCAGCTGA 2266
Query 2089 TACCAGGGTCACCTTTACGGACATTGTGCCTACTGGTTGCAGGACAACCAGCTGAAGTGT 2148
|||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 2267 TACCCGGGTCACCTTTACGGACATTGTGCCTACTCGTTGCGGGACAACCAGCTGAAGTGT 2326
Query 2149 GTCCCGCTGGAAGTAGTAG---CATGCTTGACAATTGGGAAGAGAATTTGGGTATAATAA 2205
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2327 GTCCCACTGGAAGTAGTAGTAGCATGCTTGACAATTGGGAAGAGAATTTGGGTATAATAA 2386
Query 2206 CTGCTAACAGAACCACGGATGATGAGCTTGTGATTACTCATCTTGGAGATCGCATGTGGA 2265
|||||||||||||||| ||||| || |||||||||| ||||||||||||| |||||||||
Sbjct 2387 CTGCTAACAGAACCACAGATGACGACCTTGTGATTATTCATCTTGGAGATAGCATGTGGA 2446
Query 2266 AAGATAG-GGGCGAGATAATTGCGGCGCATATTTGCTATTTAATCGCGGACAAGAACTTT 2324
|||| || ||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2447 AAGAAAGAGGG-GAGATAATTGCGGCGCATATTTGCTATTTAATCGCAGACAAGAACTTT 2505
Query 2325 GATCCATACTCAGAATGCGCCAGACTCTGCCTTGTCAGAGCTGACCATTGGAAATGTCCT 2384
||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||
Sbjct 2506 GATCCATACTCAGAAAGCGCCAGACTCTGCCTTGTCGGAGCGGACCATTGGAAATGTCCT 2565
Query 2385 CGAACATACGCAAGTCCAGAGGCTATACAGTTATCTTTGCATGGGCAGAGGACAGAGTTA 2444
|||||||||||||||||||| ||||||||| | | | | ||||||||
Sbjct 2566 CGAACATACGCAAGTCCAGATGCTATACAG--A-----G-A-----A-----CAGAGTTA 2607
Query 2445 TATGAATACTCTAAGACACTGGGAAATTCTCAGTATATCCTGTTACCGTTTCAACCATAT 2504
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 2608 TATGAATACTCTAAGACGCTGGGAAACTCTCAGTATATCCTGTTACCGTTTCAACCATAT 2667
Query 2505 AAAATCATATATGCCCATATGCTGGCCGAAGTTGGTAATA-TTTCGACTGCACAGAAGTA 2563
|||||||||||||| ||||||||||| ||||||||||| | |||| |||||||| |||||
Sbjct 2668 AAAATCATATATGCTCATATGCTGGCTGAAGTTGGTAA-ACTTTCTACTGCACAAAAGTA 2726
Query 2564 CTGTCAAGCAGTATTAAAATGCCTCAAGAC-AGGCCGATCACCAGAAGTGGGAATGTGGA 2622
||||||||||||| ||| |||||||||||| || ||||||| | ||||| | ||||||||
Sbjct 2727 CTGTCAAGCAGTAATAAGATGCCTCAAGACTAG-CCGATCATCTGAAGTAGAAATGTGGA 2785
Query 2623 AACAGTTTGTTTCATCTCTTGAAGAGAGAATCCGTATCCACCAACAGGGCGGGTATACTG 2682
| ||||||| |||||||||||||||||||||||||| ||| ||| |||| ||| | | |
Sbjct 2786 AGCAGTTTGCTTCATCTCTTGAAGAGAGAATCCGTAGCCATCAAGAGGGTGGG-A-A-T- 2841
Query 2683 CGAATTTGGCCCCAGCAAAACTTGTTGGAAAGTTCCTGAACT 2724
|| ||||||||||||||||||||||||| | |||||||
Sbjct 2842 ----TT-GGCCCCAGCAAAACTTGTTGGAAAGCTGCTGAACT 2878
Score = 1118 bits (605), Expect = 0.0
Identities = 763/837 (91%), Gaps = 20/837 (2%)
Strand=Plus/Plus
Query 729 GAGAGCTATATAAACTCAACAAGTAACTGGGAAAGCGTTGCTGCTGATAACTCGGATGTT 788
||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 793 GAGAGCTATATTAACTCAACAGGTAACTGGGAAAGCGTTGCTGCTGATAACTCGGATGTT 852
Query 789 GCTTATCTGAAACAGAGTACAACATCTGCAGCGGCTGGCACAGTTGAGAGTGTGTCTACT 848
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 853 GCTTATCTGAAACAGAGTACAACATCTGCAATGGCTGGCACAGCTGAGAGTGTGTCTACA 912
Query 849 TGGAATCAGGTTTCACAAGTGAGCAATGGATATCCAGAACACATGATCTTTGACGCTCAG 908
||||| ||||||||||||||| ||||||||||||||||||||||| | |||||||| |||
Sbjct 913 TGGAACCAGGTTTCACAAGTGGGCAATGGATATCCAGAACACATGGTATTTGACGCCCAG 972
Query 909 TATCCTGGATGGTACTATGACACAATTGCTCAAGAGTGTCGCTCTCTAGACAGCTACAAC 968
||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||
Sbjct 973 TATCCTGGATGGTACTATGACACAATTGCTCAAGAATGGCGCTCTCTGGACAGCTACAAC 1032
Query 969 CAGGCTTCTCAAACAACTCTAACTGGTCAAGCTCATGATAAGCAAGTTCAGAATGGTCA- 1027
|||||||| ||||||||| |||||||||||||||||||| ||||||||||||| |||||
Sbjct 1033 CAGGCTTCCCAAACAACTGTAACTGGTCAAGCTCATGATCAGCAAGTTCAGAACGGTCAT 1092
Query 1028 --T-G-----CT-CG--T---AAT-A-A-CCAGAGTAGTATGTATGATGTTAACGACAAA 1070
| | || || | ||| | | |||||||||| |||||||||||||| |||||
Sbjct 1093 GCTCGTACAACTACGTATCACAATAATAGCCAGAGTAGTGTGTATGATGTTAACAACAAA 1152
Query 1071 AACCAGACTTTCAAAGCGCAAGAATATGCTATTCAGAGCCAACACGGAAGTTGGGACCAG 1130
|||||||| |||||||||||||| | |||||||||| |||||||||||||||||||| |
Sbjct 1153 AACCAGACATTCAAAGCGCAAGACTTTGCTATTCAGGGCCAACACGGAAGTTGGGACGAA 1212
Query 1131 TCTTACTATGCCAACAATCAGCAGGCTGCAAACACTTGGCAATCAGTAAATGTAGGTCAG 1190
|||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||
Sbjct 1213 TCTTACTATGCCAACAATCAGCAGGCTGGAAACACTTGGCAACCAGTAAATGTAGGTAAG 1272
Query 1191 GCTGAGCCTGCTATAAATTCGGATTCATTATCAAGCTTTGGAGGAAACCAGCAAGTAAAT 1250
||||||||||| ||| ||| |||||||||||| |||| |||||||||||||||||||||
Sbjct 1273 GCTGAGCCTGCGGTAACTTCTGATTCATTATCACGCTTCGGAGGAAACCAGCAAGTAAAT 1332
Query 1251 AATTTGTACAGTACAGAACCTGTGACTGAACAGTTTAAGCCAAATGCGATTGGAGCGCAG 1310
|||||||||||||||||| ||||| |||||||||||||||||||| |||||||||| |||
Sbjct 1333 AATTTGTACAGTACAGAATCTGTGGCTGAACAGTTTAAGCCAAATACGATTGGAGCCCAG 1392
Query 1311 AGCTTCATCCCACAGCATATGAATCTGGCTAGTGTCACACAGAATGGACCTTTGAGTTTC 1370
||||| ||||| |||||||||||| ||||||||| |||||| |||||||| |||||||||
Sbjct 1393 AGCTTTATCCCTCAGCATATGAATGTGGCTAGTGCCACACAAAATGGACCATTGAGTTTC 1452
Query 1371 TCAAACGATGTCTATAATAGACAGCAATCTGTAGATGATGCTCATCAGTCTTTTCAGAAC 1430
||||||||| | ||||||||||||||||| |||||| ||||||| ||||||||||||||
Sbjct 1453 TCAAACGATTTGTATAATAGACAGCAATCGGTAGATCATGCTCAAAAGTCTTTTCAGAAC 1512
Query 1431 AATCAGCTTTTCTCCCCAAGTGCGGGAAGATCATCTGAT-GGTCGTCCACCACATGCACT 1489
|||||||||||||||||||||| |||||||||||||||| || ||||||||||| |||||
Sbjct 1513 AATCAGCTTTTCTCCCCAAGTGTGGGAAGATCATCTGATAGG-CGTCCACCACACGCACT 1571
Query 1490 TGTCAGTTTTGGATTTGGTGGGAAGCTCATTGTTATGAAGGATAATAATGGTTCTCT 1546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1572 AGTCAGTTTTGGATTTGGTGGGAAGCTCATTGTTATGAAGGATAATAATGGTTCTCT 1628
Score = 1002 bits (542), Expect = 0.0
Identities = 680/740 (92%), Gaps = 35/740 (5%)
Strand=Plus/Plus
Query 21 ATGGCTTCGACTGCTGATTTCCTCCTGGAGGATCAAACGGACGAGGATTTCTTCGACAAA 80
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1 ATGGCTTCGACTGCTGATTTCCTCCTGGATGATCAAACGGACGAGGATTTCTTCGACAAA 60
Query 81 CTTGTTGATGATTCCTATACTCCTACCGCTTCATCCTCTGCTAAGGAGCTCAAATTCGAT 140
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 61 CTTGTTGATGATTCCTATACTCCTACCGCTTCATCCTCTGCCAAGGAGCTGAAATTCGAT 120
Query 141 GACGGTAGTGATTCCGATGACGCCAAAGCTTTTGCGAATCTCTCCGTCGTTGACGATGTT 200
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 121 GACGGTAGTGATTCCGATGACGCCAAAGCTTTTGCTAATCTCTCCGTCGTTGACGATGTT 180
Query 201 GTGGGTGATGGAGATGTCGCATTGAATGAAGCA--------G---G-T-TT--------G 239
|||||||||||||||||||||||||||||||| | | | || |
Sbjct 181 TTGGGTGATGGAGATGTCGCATTGAATGAAGCAGGTTTGGGGAACGATGTTGCAAACGAG 240
Query 240 GGTACAAGTGGTTCGGTGGGAAAAGAAGAGCCTTCTTCATCTATTGCTCCGGAAGCTCTT 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 241 GGTACAAGTGGTTCGGTGGGAAAAGAAGAGCCTTCTTCATCTATTGCTCCGGAAGCTGTT 300
Query 300 CAATTTGTCAACAGTGATGCAAATAAGTTAAGGGATGATGATGATGTGGTGAGATCGGGG 359
||||||||||||||||||||||||| ||||||||||| | |||||||||| |||||| |
Sbjct 301 CAATTTGTCAACAGTGATGCAAATAGGTTAAGGGATG-T--TGATGTGGTGCGATCGGAG 357
Query 360 GTGGATGATATGCCACTAACTGAAAC-GGCAAAAGAAAGTAATATAGTCGATGGATCTGG 418
|||||||||||| ||||||||||||| || |||||| |||||||||||||||||||||||
Sbjct 358 GTGGATGATATGGCACTAACTGAAACAGG-AAAAGAGAGTAATATAGTCGATGGATCTGG 416
Query 419 GAGTCCTGGGGTTAAGGAGGTTGGTTGGGGCTCCTTTTATGCCGATTCATCTGTAAATGA 478
||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||
Sbjct 417 GAGTCCTGGGGTTAAGGAGGTTGACTGGGGCTCGTTTTATGCAGATTCATCTGTAAATGA 476
Query 479 CGGTCGTGGGTTTGGTTCATACTCTGATTTCTTCACTGAGTTGGATGGAACTGCAGGGGA 538
|||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 477 CGGTGGTGGGTTTGGTTCATACTCTGATTTCTTCACTGAGTTGGATGCAACTGCAGGAAA 536
Query 539 TTTACAGGGACAGGCCGAGGTAGCTGTGGCCACTGGAGGCAACTTAGTAGCCAATG---C 595
| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |
Sbjct 537 TGTACAGGGACAGGCGGAGGTAGCTGTGGCCACTGGAGGAAACTTAGTAGCCAATGATAC 596
Query 596 AA----CA-A-GTGTTGGTTTAGATAATTCGGCAGGGTTTGAGCAACACCAGGGTCAAGT 649
|| || | ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 597 AATTAACACAAGTGTTGGTTTAGATAATTCGGCAGGCTTTGAGCAACACCAGGGTCAAGT 656
Query 650 GCAACACGATTCTGGAAGCGGGCAGTATGTGGATAATAGTCAATCTTGGGAATATCTCTA 709
|||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct 657 GCAACACGATTCTGGAAGCGGGCAGTATGTGGATAACAGTCAATCTTGGGAAAATCTCTA 716
Query 710 TCCTGGATGGAAATATGATG 729
||||||||||||||||||||
Sbjct 717 TCCTGGATGGAAATATGATG 736
Score = 76.8 bits (41), Expect = 1e-12
Identities = 45/47 (96%), Gaps = 0/47 (0%)
Strand=Plus/Plus
Query 2755 GGGGGATGCCACCACCTGCACCACATTCAACAACCGGAAACCTGCAG 2801
|||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct 2885 GGGGGATGCCACCACCTGCACCACATTCAACAACTGGAAACCCGCAG 2931
> AT5G47490.1 | Symbols: | RGPR-related | chr5:19264675-19270800
FORWARD LENGTH=4399
Length=4399
Score = 878 bits (475), Expect = 0.0
Identities = 567/612 (93%), Gaps = 4/612 (1%)
Strand=Plus/Plus
Query 1554 GAAGACTCTTTGAGCTACTTTC-GTTGCCTGCATCAACAATCTCTTCCAGGTCCTTTGGT 1612
||| |||||||||| ||| ||| |||| ||| ||||||||||||||||||| || |||||
Sbjct 1711 GAAAACTCTTTGAGTTAC-TTCAGTTGTCTGGATCAACAATCTCTTCCAGGACCCTTGGT 1769
Query 1613 AGGAGGAAATGTTGGAAGTAAAGAGTTGCATAAGTGGATTGATGAGAGAATTTTGAATTG 1672
||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||
Sbjct 1770 TGGAGGAAATGTTGGAAGTAAAGACTTACATAAGTGGCTTGATGAGAGAATTTTGAATTG 1829
Query 1673 TGAATCTTCCTATATGGATTTTTCAAGAGGGAAACTCTTAAAGATGCTTCTTTCTTTACT 1732
|||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||| ||
Sbjct 1830 TGAATCTTCCTACATGGACTTTTCAAGAGGGAAACTTTTAAAGATGCTTCTTTCTTTGCT 1889
Query 1733 CAGAATATCTTATCAGTATTATGGGAAACTCCGTTCTCCTTTTGGTACTGATGCATCACA 1792
||||||||||| |||||||||||||||||||||||||||||||||| | ||||||| ||
Sbjct 1890 CAGAATATCTTGTCAGTATTATGGGAAACTCCGTTCTCCTTTTGGTTCCGATGCATTGCA 1949
Query 1793 AAAGGAAACGGACTCTGCTGAAGCAGCAGTCGCTAAGCTTTTTGCATTTGCCAAGAAAGA 1852
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 1950 AAAGGAAACGGACTCTGCTGAAGCAGCAGTCGCTAAGCTTTTTGCAATTGCCAAGGAAGA 2009
Query 1853 TGGCGTACAAAATGGTTATGCTCCTATTAGCCAATGCTTGCAGTATTTACCACCTGAATC 1912
||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||
Sbjct 2010 TGGCGTACAAAATGGTTATGCTCCTATTAGCCAATGCTTACAGCATTTACCACCGGAATC 2069
Query 1913 ACAAATGCAAGTAACTGCTTCAGAGGTTCAGAATCTTCTGGCTTCTGGTAGAAAAATGGA 1972
||||||||||||||||||||||||||| |||||||||||||||||||| || || |||||
Sbjct 2070 ACAAATGCAAGTAACTGCTTCAGAGGTGCAGAATCTTCTGGCTTCTGGCAGGAAGATGGA 2129
Query 1973 GGCTCTACAATGTGCACAAGATGGCCATTTATGGGGACCAGCGCTTGTTATCGCGGCACA 2032
|||||| |||||||||||||| || ||||||||||||||||||||||||||||| |||||
Sbjct 2130 GGCTCTCCAATGTGCACAAGAAGGTCATTTATGGGGACCAGCGCTTGTTATCGCAGCACA 2189
Query 2033 ACTTGGGGATCAGTTCTATGTTGACACTGTGAAACAAATGGCCCTTCGCCAGCTGATACC 2092
||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2190 ACTTGGGCAACAGTTCTATGTTGACACTGTGAAACAAATGGCCCTTCGCCAGCTGGTACC 2249
Query 2093 AGGGTCACCTTTACGGACATTGTGCCTACTGGTTGCAGGACAACCAGCTGAAGTGTGTC- 2151
|||||||||||||| ||| ||||||| ||||||||||| |||||||||||||||| ||
Sbjct 2250 CGGGTCACCTTTACGAACACTGTGCCTGCTGGTTGCAGGGCAACCAGCTGAAGTGT-TCT 2308
Query 2152 CCGCTGGAAGTA 2163
|| |||||||||
Sbjct 2309 CCACTGGAAGTA 2320
Score = 809 bits (438), Expect = 0.0
Identities = 713/841 (85%), Gaps = 37/841 (4%)
Strand=Plus/Plus
Query 729 GAGAGCTAT-ATAAACTCAACAAGTAACTGGGAAAGCGTTGCTGCTG-ATAACTCGGATG 786
||||||||| | ||||||||| ||||||||||||| ||||||||| | | ||||||||||
Sbjct 778 GAGAGCTATGA-AAACTCAACTAGTAACTGGGAAAACGTTGCTGC-GAACAACTCGGATG 835
Query 787 TTGCTTATCTGAAACAGAGTACAACATCTGCAGCGGCTGGCACAGTTGAGAGTGTGTCTA 846
||||||||| || |||||||||| ||||||||| ||||||||||||||||| ||| ||||
Sbjct 836 TTGCTTATCAGAGACAGAGTACAGCATCTGCAGTGGCTGGCACAGTTGAGAATGTTTCTA 895
Query 847 CTTGGAATCAGGTTTCACAAGTGAGCAATGGATATCCAGAACACATGATCTTTGACGCTC 906
||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||| | |
Sbjct 896 CTTGGAACCAGGTTTCACAAGTGAGCAATGGGTATCCAGAACACATGGTCTTTGACTCCC 955
Query 907 AGTATCCTGGATGGTACTATGACACAATTGCTCAAGAGTGTCGCTCTCTAGACAGCTACA 966
||||||| ||||||||||||||||||||||||||||| || |||||||| ||||||||||
Sbjct 956 AGTATCCGGGATGGTACTATGACACAATTGCTCAAGAATGGCGCTCTCTTGACAGCTACA 1015
Query 967 ACCAGGCTTCTCAAACAACTCTAACTGGTCAAGCTCATGATAAGCAAGTTCAGAATGGTC 1026
||||||||| || | || | ||||||||||||| ||||| |||||||||||||||| |
Sbjct 1016 ACCAGGCTTTTC--A-AA--C-AACTGGTCAAGCTAATGATCAGCAAGTTCAGAATGG-C 1068
Query 1027 -ATGCTCGTA-A----T-AACC-----AGAG-TAGT-ATGT--ATGATGTTAACGACAAA 1070
|| || || | | ||| |||| ||| | || |||||||| |||| |||
Sbjct 1069 AATTCTTTTACAGCTGTGGACCATAGTAGAGAGAGTAACGTACATGATGTTTACGATAAA 1128
Query 1071 AACCAGACT-TTCA-AAGCGCAAGAATATGCTATTCAGAGCCAACACGGAAGTTGGGACC 1128
|| |||| | ||| || | ||| ||| || ||| ||||||||||| ||||||||||| |
Sbjct 1129 AATCAGA-TACTCAGAA-CACAAAAATTTGATATCCAGAGCCAACATGGAAGTTGGGATC 1186
Query 1129 AGTCTTACTATGCCAACAATCAGCAGGCTGCAAACACT-TGGCAATCAGTAAATGTAGGT 1187
| || ||||||| ||| |||||||||||| |||||| | |||||| ||| ||||| ||||
Sbjct 1187 AATCGTACTATGACAAAAATCAGCAGGCTACAAACA-TGTGGCAACCAGAAAATGCAGGT 1245
Query 1188 -CAGGCTGAGCCTGCTATAAATTCGGATTCATTATCAAGCTTTGGAGGAAACCAGCAAGT 1246
| ||||||| | ||| | | | | | |||||||||| || |||||||||||||||||
Sbjct 1246 GC-GGCTGAGGCGGCTGTGACTCCTGCCTCATTATCAAACTCCGGAGGAAACCAGCAAGT 1304
Query 1247 AAATAATTTGTACAGTACAGAACCTGTGACTGAACAGTTTAAGCCAAATGCGATTGGAGC 1306
|||||||||||||||||||| ||||||| ||||||||||||||||| ||| || ||| |
Sbjct 1305 AAATAATTTGTACAGTACAGGACCTGTGGCTGAACAGTTTAAGCCATATGAGAGTGGCGT 1364
Query 1307 GCAGAGCTTCATCCCACAGCATATGAATCTGGCTAGTGTCACACAGAATGGACCTTTGAG 1366
||||||||||| || |||||||||||| |||||| |||||| ||||||||||| ||||
Sbjct 1365 TCAGAGCTTCATTCCTCAGCATATGAATGTGGCTAATGTCACGCAGAATGGACCCATGAG 1424
Query 1367 TTTCTCAAACGATGTCTATAATAGACAGCAATCTGTAGATGATGCTC-ATCAGTCTTTTC 1425
|||||| |||| | | |||| ||||||| |||||||||||||||||| | ||||| ||||
Sbjct 1425 TTTCTCGAACGGTTTTTATAGTAGACAGGAATCTGTAGATGATGCTCCA-CAGTCATTTC 1483
Query 1426 AGAACAATCAGCTTTTCTCCCCAAGTGCGGGAAGATCATCTGATGGTCGTCCACCACATG 1485
||| || ||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 1484 AGAGCAGTCAGCTTTTCTCCCCAAGTGCAGGAAGATCATCTGATGGGCGTCCACCACATG 1543
Query 1486 CACTTGTCAGTTTTGGATTTGGTGGGAAGCTCATTGTTATGAAGGATAATAATGGTTCTC 1545
||||||||| |||||||||||| || ||||||||| |||||||||| ||| ||||||||
Sbjct 1544 CACTTGTCAATTTTGGATTTGGCGGAAAGCTCATTCTTATGAAGGACGATAGTGGTTCTC 1603
Query 1546 T 1546
|
Sbjct 1604 T 1604
Score = 756 bits (409), Expect = 0.0
Identities = 577/653 (88%), Gaps = 32/653 (5%)
Strand=Plus/Plus
Query 2156 TGGAAGTAGTAGCATGCTTGACAATTGGGAAGAGAATTTGGGTATAATAACTGCTAACAG 2215
|||| |||||||||||||||||| |||||||||||||||||||||||| ||||| |||||
Sbjct 2376 TGGATGTAGTAGCATGCTTGACAGTTGGGAAGAGAATTTGGGTATAATTACTGCGAACAG 2435
Query 2216 AACCACGGATGATGAGCTTGTGATTACTCATCTTGGAGATCGCATGTGGAAAGATAGGGG 2275
|||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct 2436 AACCACAGATGATGAGCTTGTGATTACTCATCTTGGAGATTGCATGTGGAAAGAAAGGGG 2495
Query 2276 CGAGATAATTGCGGCGCATATTTGCTATTTAATCGCGGACAAGAACTTTGATCCATACTC 2335
|||||| |||||||| ||||||||||||||||| ||||| |||||||||||| |||||||
Sbjct 2496 CGAGATTATTGCGGCCCATATTTGCTATTTAATTGCGGATAAGAACTTTGATACATACTC 2555
Query 2336 AGAATGC-GCCAGACTCTGCCTTGTCAGAGCTGACCATTGGAAATGTCCTCGAACATACG 2394
|| || | |||||||| |||||||| |||| || || ||||||| |||||||||||| |
Sbjct 2556 AG-ATACTGCCAGACTGTGCCTTGTTGGAGCGGATCACTGGAAATATCCTCGAACATATG 2614
Query 2395 CAAGTCCAGAGGCTATACAGTTATCTTTGCATGGGCAGAGGACAGAGTTATATGAATACT 2454
||||||||||||| | | || || | ||| |||||||||||||||||||
Sbjct 2615 CAAGTCCAGAGGC--T--A--TA------CA---G-AGA--ACAGAGTTATATGAATACT 2656
Query 2455 CTAAGACACTGGGAAATTCTCAGTATATCCTGTTACCGTTTCAACCATATAAAATCATAT 2514
||||||| |||||||| |||||||||| ||||||| ||||||||||||||||| |||| |
Sbjct 2657 CTAAGACGCTGGGAAACTCTCAGTATACCCTGTTAACGTTTCAACCATATAAAGTCATGT 2716
Query 2515 ATGCCCATATGCTGGCCGAAGTTGGTAATA-TTTCGACTGCACAGAAGTACTGTCAAGCA 2573
|||||||||||||||| ||||||||||| | ||||||||||||| |||||||||||||||
Sbjct 2717 ATGCCCATATGCTGGCTGAAGTTGGTAA-ACTTTCGACTGCACAAAAGTACTGTCAAGCA 2775
Query 2574 GTATTAAAATGCCTCAAGACAGGCCGATCACCAGAAGTGGGAATGTGGAAACAGTTTGTT 2633
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2776 GTATTAAAATGCCTCAAGACAGGCCGATCACCAGAAGTGGAAATGTGGAAACAGTTTGTT 2835
Query 2634 TCATCTCTTGAAGAGAGAATCCGTATCCACCAACAGGGCGGGTATACTGCGAATTTGGC- 2692
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 2836 TCATCTCTTGAAGAGAGAATCCGTATCCACCAACAGGGCGGGTATACAGCGAATTTA-CA 2894
Query 2693 CCCAGCAAAACTTGTTGGAA-AGTTCCTGAACTTTATTGATAGTACAG-CATC-TCGTGT 2749
||||| ||||||||||||| | | | | |||||| ||| ||||| || || | ||||
Sbjct 2895 CCCAGAAAAACTTGTTGGAGTACTGC-TAAACTTTTTTGGTAGTA-AGACA-CATCGTCC 2951
Query 2750 TGTTGGGGGGATGCCACCACCTGCACCACATTCAAC-AACCGGAAACCTGCAG 2801
||||||||| |||||||||||||||||||||||||| || |||||||| |||
Sbjct 2952 TGTTGGGGGCATGCCACCACCTGCACCACATTCAACCAAA-GGAAACCTACAG 3003
Score = 468 bits (253), Expect = 2e-130
Identities = 591/745 (79%), Gaps = 60/745 (8%)
Strand=Plus/Plus
Query 21 ATGGCTTCGACTGCTGATTTCCTCCTGGAGGATCAAACGGACGAGGATTTCTTCGACAAA 80
||||||||| || || | ||||| ||||||||||| ||||| |||||||||||||||||
Sbjct 1 ATGGCTTCGGCTTCTCAATTCCTGCTGGAGGATCAGACGGATGAGGATTTCTTCGACAAG 60
Query 81 CTTGTTGATGATTCCTATACT----CC-TA-C-C--GCTTCATCCTCTGCT-AAGGAGCT 130
|||||||||||| | ||| || || | | | ||||||||||||| | | ||||||
Sbjct 61 CTTGTTGATGATGCTTATTCTCCCACCGAAGCTCAGGCTTCATCCTCTG-TGACGGAGCT 119
Query 131 CAAATTCGATGACGGTAGTGATTCCGATGACGCCAAAGCTTTTGCGAATCTCTCCGTCGT 190
|| ||||| || | ||||| |||||||| || ||||||| |||||||||| | |
Sbjct 120 GAAGTTCGACGATGAAAGTGACTCCGATGATATCAGAGCTTTTTCGAATCTCTCTATTGG 179
Query 191 TGACGAT-GTTGTGGG-TGATGGAGATGTCGCATTGAATGAAGC-A-------G---G-T 236
| | ||| || |||| || ||||||| | || |||||||||| | | | |
Sbjct 180 TAAAGATCCTT-TGGGCGGA-GGAGATGGCACACTGAATGAAGCAATTTTGGGGAACGAT 237
Query 237 -TT--------GGGTACAAGTGGTTCGGTGGGAAAAGAAGAGCCTTCTTCATCTATTGCT 287
|| |||| |||| ||||||||||| |||| ||| | ||||||||||||||
Sbjct 238 GTTGCAAACGAGGGTGCAAGCGGTTCGGTGGGGGAAGACGAG-C--CTTCATCTATTGCT 294
Query 288 CCGGAAGCTCTTCAATTTGTCAACAGTGATGCAA-ATAAGTTAAGGGATGATGATGATGT 346
||||||||| |||||||| | | |||||||||| || |||| || ||||||||
Sbjct 295 CCGGAAGCTGTTCAATTTCCCCATAGTGATGCAAGGGAA-TTAA--GA-GATGATGA--- 347
Query 347 GGTGAGATCGGGGGTGGATGATATGCCACTAACTGAAACGGCAAAAGAAAGTAATATAGT 406
||||||||| ||| | ||||||||||||| ||||||| ||||||||| | | |||||
Sbjct 348 AATGAGATCGGAGGTAGCTGATATGCCACTATCTGAAACAGCAAAAGAATGCACGATAGT 407
Query 407 CGATGGA-TCTGGGAGTCCTGGGGTTAAGGAGGTTGGTTGGGGCTCCTTTTATGCCGATT 465
| || | |||| |||||||||||||||| | | |||||| || ||| |||| ||||
Sbjct 408 -TAACGAGCCCGGGATTCCTGGGGTTAAGGAGCTAGATTGGGGTTCATTTGATGCGGATT 466
Query 466 CATCTGTAAATGACGGTCGTGGGTTTGGTTCATACTCTGATTTCTTCACTGAGTTGGATG 525
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 467 TATCTGTAAATGACGGTCGTGGGTTTGGTTCATACTCTGATTTCTTCACTGAGCTGGATG 526
Query 526 GAACTGCAGGGGATTTACAGGGACAGGCCGAGGTAGCTGTGGCCACTGGAGGCAACTTAG 585
||||||||| ||||||||||| |||| || |||||||||||||||||||| |||||||
Sbjct 527 CAACTGCAGGAAATTTACAGGGAAAGGCGGATGTAGCTGTGGCCACTGGAGGAAACTTAG 586
Query 586 TAGCCAATGCA-ACAAGTGTTGGTTTAGATAATTCGGCAGGGTTTGAGCAACACCAGGGT 644
||||||||| | |||| | | | || | | |||||||||||||||||||||
Sbjct 587 TAGCCAATG-ATACAAATA-------ACACAAGT-GTT-GGGTTTGAGCAACACCAGGGT 636
Query 645 CAAGTGCAACACGATTCTGGAAGCGGGCAGTATGTGGATAATAGTCAATCTTGGGAATAT 704
||| |||| |||||||||| |||||||||||| |||||||| ||||||||||||||| ||
Sbjct 637 CAATTGCACCACGATTCTGCAAGCGGGCAGTACGTGGATAACAGTCAATCTTGGGAAAAT 696
Query 705 CTCTATCCTGGATGGAAATATGATG 729
|||||||||||||||||||||||||
Sbjct 697 CTCTATCCTGGATGGAAATATGATG 721
> AT2G31751.1 | Symbols: | unknown gene | chr2:13499341-13502114
REVERSE LENGTH=1850
Length=1850
Score = 141 bits (76), Expect = 4e-32
Identities = 98/108 (91%), Gaps = 4/108 (4%)
Strand=Plus/Plus
Query 2800 AGCTCTTGAAGCTATTCCTGTTAGCGAAGGCACATCATTGTGCAACGCTTGATGGGTCGA 2859
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 206 AGCTCTTGAAACTCTTCCTGTTAGCGAAGGCACATCATTGTGCAACGCTTGATGGGTCGA 265
Query 2860 GGCTCGAGCAAGGC-ACTAAAGAGAAAGAGAGAGATGAGGCACTAAAG 2906
|||||||||||||| | |||| || ||||||||| |||||| ||||
Sbjct 266 GGCTCGAGCAAGGCGAG-AAAGGGA--GAGAGAGATAAGGCACCAAAG 310
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 146637974389
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5