BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg948269 Length=566 Score E Sequences producing significant alignments: (Bits) Value AT5G46720.1 | Symbols: | AIG2-like (avirulence induced gene) f... 848 0.0 > AT5G46720.1 | Symbols: | AIG2-like (avirulence induced gene) family protein | chr5:18959169-18959749 FORWARD LENGTH=581 Length=581 Score = 848 bits (459), Expect = 0.0 Identities = 528/561 (94%), Gaps = 5/561 (1%) Strand=Plus/Plus Query 10 AACTCGCCGCCATGGGAGGATCACACAAGAACCTCATCTTCGTGTACGGAACGTTAAAAA 69 ||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct 4 AACTCATCGCCATGGGAGGATCAAACAAGAACCTCATATTCGTGTACGGAACGTTAAAAA 63 Query 70 GAAACCATCGAAACCATTTCCTTTTAGAAGATCTGATCTCAACAAACGACGCCGTTTACA 129 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 64 GAAACCATCGAAACCATTTCCTCCTAGAAGATCTGATCTCAACAAACGACGCCGTTTACA 123 Query 130 TCGGCCAACGCACGACCCGGTTACAGTACCCGCTCGTTACGGGTCTCTACGGGATTCCTT 189 | || |||||||||||||||||||| |||||||||||||| |||||||| ||||| |||| Sbjct 124 TAGGACAACGCACGACCCGGTTACAATACCCGCTCGTTACAGGTCTCTATGGGATCCCTT 183 Query 190 ACTTAATCAACAAATCCGGGTCGGGTCAAAAGATCCGAGGTGAGCTTTATTCGGTTTCAA 249 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 184 ACTTAATCAACAAATCCGGGTCGGGTCAAAAGATCCGAGGCGAGCTTTATTCGGTTTCAA 243 Query 250 AACGTGGGCTTGTACGTCTTGATGAATTGGAAGGGATCAAAGTGAATCACTACGAGAGAT 309 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct 244 AACGTGGGCTTGTACGTCTTGATGAATTGGAAGGTATCAAAGTTAATCACTACGAGAGAT 303 Query 310 TACCAATTGAAGTTATTGATG-A-A-GATGAAGAAGAAGAACCAAACGGCGTCGTTTTGG 366 ||||||| ||||||||||| | | | ||||||||||||||| ||||||| ||||| |||| Sbjct 304 TACCAATAGAAGTTATTGAGGAAGATGATGAAGAAGAAGAATCAAACGGTGTCGTCTTGG 363 Query 367 CTGAGGCTTATTTTGCTCA-TTGTGGATTTGGTGAGAGATTGTGGGAGAAGAAAGGTAAA 425 ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 364 CTGAGGCTTATTTTGCTCACTT-TGGATTTGGTGAGAGATTGTGGGAGAAGAAAGGTAAA 422 Query 426 TGTGGGATGTGTGAATTTGGTGAAAACGATGGCGTTTTGTATGTTAGGGTTAAAGATAGA 485 ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 423 TGTGGGATGTGTGAATTTGGTGAAAACGATGGCGTTTTGTATGTTCGTCCTAAAGATAGG 482 Query 486 CCAAGGTTTAGCTCTGTTCTTGATGAAATTGAAGCTTTTGTGTCTTCTAGTAATGATTGA 545 |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 483 CCAATGTTTAGCTCTGTTCTTGATGAAATTGAAACTTTTGTGTCTTCTAGTAATGATTGA 542 Query 546 TTACTAATTTGATTCAATGGG 566 |||||||||| |||||||||| Sbjct 543 TTACTAATTTAATTCAATGGG 563 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 27176673527 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5