BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg948342 Length=700 Score E Sequences producing significant alignments: (Bits) Value AT5G46090.1 | Symbols: | Protein of unknown function (DUF679) ... 926 0.0 AT4G18425.1 | Symbols: | Protein of unknown function (DUF679) ... 351 4e-96 > AT5G46090.1 | Symbols: | Protein of unknown function (DUF679) | chr5:18693485-18694129 FORWARD LENGTH=645 Length=645 Score = 926 bits (501), Expect = 0.0 Identities = 575/612 (94%), Gaps = 0/612 (0%) Strand=Plus/Plus Query 69 ATCAAAGAAGAAACTGTTCCACTCCTGGATGATCGAAATCGAAATCGGGACTTTCCTGAC 128 |||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||| Sbjct 34 ATCAAAGAAGAAACAGTTCCACTCCTGGATGATCAAAATCGAAATCGGGACTTACCTGAC 93 Query 129 ATAGAAAGGAACACTATGATGCAAAAGGCAATAGGTAAGACTTTTCAGACCACAGCTAAT 188 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 94 ATAGAAAGGAACACTATGATGCAAAAGGCAATAGGTAAGACTTTTCAGACAACAGCTAAT 153 Query 189 CTAGCTAATCTTTTACCAACGGGGACAGTTCTTGCGTTCCAGATCTTATCGCCAATTTGC 248 ||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||| Sbjct 154 CTAGCTAATCTTTTACCTACGGGGACAGTTCTTGCATTCCAGATTTTATCGCCAATTTGC 213 Query 249 ACAAATGCTGGGCAATGCGATCTAGCTAGCAGAGTCATGACTGCATTGCTAGTTTCCATC 308 ||||| | ||| | ||||||||| |||||||| |||||||||| ||||||||||||||| Sbjct 214 ACAAACGTTGGACGCTGCGATCTAACTAGCAGATTCATGACTGCGTTGCTAGTTTCCATC 273 Query 309 TGTGGGTTCTCTTGTTTCATACTTAGCTTCACAGATTCTTACAAGGACTTGAATGGAAAT 368 || || ||||||||||||||||||||||||||||||||||||||||| |||||||| | | Sbjct 274 TGCGGATTCTCTTGTTTCATACTTAGCTTCACAGATTCTTACAAGGATTTGAATGGTAGT 333 Query 369 GTCTGCTATGGATTTGCAACAATCCATGGTTTTTGGATAATTGATGGCTCAGCTACTCTT 428 |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct 334 GTCTGCTATGGATTTGCAACAATCCATGGTTTCTGGATCATTGATGGCTCAGCTACTCTT 393 Query 429 CCTCAAGAACGTTCCAAAAGCTACAAACTACAGTTTATAGACTTCGTATATGCCATTATG 488 |||||||||| |||||||||||||||||||| |||||| ||||||||| ||||||||||| Sbjct 394 CCTCAAGAACTTTCCAAAAGCTACAAACTACGGTTTATCGACTTCGTACATGCCATTATG 453 Query 489 TCGTTTCTGGTTTTTGGAGCCGTGGTTTTGTTTGATCAGAATGCGGTTAAATGTTTCTTT 548 ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| | Sbjct 454 TCGTTTCTGGTTTTTGGAGCCGTGGTTTTGTTTGATCAGAATGTGGTTAACTGTTTCTAT 513 Query 549 CCTGAACCATCAGCTGAAGTAGCAGAGCTTCTCACAACTTTGCCCGTAGCCGTAGGAGTC 608 || ||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||| Sbjct 514 CCCGAACCATCAGCTGAAGTAGTGGAGCTTCTCACAACTTTGCCTGTAGCTGTAGGAGTC 573 Query 609 TTCTGCAGTATGGTGTTCGCTACGTTTCCTACTACACGCCACGGTATTGGTTTTCCCCTC 668 |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct 574 TTCTGCAGTATGGTGTTCGCTAAATTTCCAACTACACGCCACGGTATTGGTTTTCCCCTC 633 Query 669 TCTGCTAAATGA 680 |||||||||||| Sbjct 634 TCTGCTAAATGA 645 > AT4G18425.1 | Symbols: | Protein of unknown function (DUF679) | chr4:10181334-10182140 REVERSE LENGTH=807 Length=807 Score = 351 bits (190), Expect = 4e-96 Identities = 463/588 (79%), Gaps = 46/588 (8%) Strand=Plus/Plus Query 117 GACTTTCCTGACATAGAAAGGAAC-ACTAT-GATGCAAAAGGCAATAGGT-AAGACTTTT 173 ||||| || || ||||||| |||| || || ||| ||||||||||||||| || || ||| Sbjct 157 GACTTCCCGGATATAGAAA-GAACGAC-ATGGATACAAAAGGCAATAGGTCAA-ACATTT 213 Query 174 CAGACCACAGCTAATCTAGCTAATCTTTTACCAACGGGGACAGTTCTTGCGTTCCAG-AT 232 || ||||| ||| || |||||||||| |||||||| || || ||||| ||||| ||| | Sbjct 214 CAAACCACTGCTCATTTAGCTAATCTCTTACCAACAGGAACCGTTCTCGCGTTTCAGCTT 273 Query 233 CTTATCGCCAATTTGCACAAAT-GCTGGGCAATGCGATCTAGCT-AGC-AGAGTCATGAC 289 | |||||||||||| | ||||| || || ||||||||| ||| | ||| ||| | ||||| Sbjct 274 C-TATCGCCAATTTTCTCAAATGGC-GGTCAATGCGATTTAG-TGAGCAAGA-TAATGAC 329 Query 290 -T-G-CATTGCTAGTTTCCATCTGTGGGTTCTCTTGTTTCATACTTAGCTTCACAGATTC 346 | | || || ||| | || ||||| |||||||| ||||||||||||||||||||||| Sbjct 330 ATCGACACTGGTAG---CAATATGTGGATTCTCTTGCTTCATACTTAGCTTCACAGATTC 386 Query 347 TTACAAGGACTTGAATGGAAATGTCTGCTATGGATTTGCAACAATCCATGGTTTTTGGAT 406 |||||| ||| || || | | | ||||||||| |||||||||||||||| |||||||| Sbjct 387 TTACAAAGACAAAAACGGTACTATTTGCTATGGACTTGCAACAATCCATGGGTTTTGGAT 446 Query 407 AATTGATGGCTC-AGCTACTCTTCCTCAAGAACGTTC-CAAA-AGCTACAAACTACAG-T 462 |||||||| || | | |||||||||||||| ||| | || || || || ||| || | Sbjct 447 CATTGATGGATCCA-CAACTCTTCCTCAAGA--GTTATCTAAGAGATATAAGCTA-AGAT 502 Query 463 TTATAGACTTCGTAT-ATGCCATT-ATGTCGTT-TCTGGTTTTTGGAGCCGTGGTTTTGT 519 ||||||| || || | |||| || |||||||| | | || ||||| || |||||||| | Sbjct 503 TTATAGATTTTGT-TCATGCT-TTCATGTCGTTAT-TCGTGTTTGGTGCGGTGGTTTTAT 559 Query 520 TTGATCAGAA-TGCGGTTAAAT-GTTTCTTTCC-TGAACCATCAGCTGAAGTAGCAGA-G 575 | |||| ||| |||||| |||| |||||||||| | | || ||||| |||| | || | Sbjct 560 TCGATC-GAAATGCGGT-AAATTGTTTCTTTCCATCA-CCGTCAGCAGAAGCATTGGAAG 616 Query 576 CTTCTCACAACTTTGCCCGTAGCCGTAGGAGTCTTCTGC-AGTATGGTGTTCGCTACGTT 634 |||| ||| ||||||| |||| |||||| || || | | |||||| |||| || || || Sbjct 617 -TTCTTACAGCTTTGCCGGTAGGCGTAGGGGTGTTTT-CTAGTATGTTGTTTGCAACATT 674 Query 635 TCCTACTACACGCCACGGTATTGGTTTTCCCCTCTCT-GCTAAATGAT 681 |||||| |||||| | || ||||||||||| || ||| | |||||||| Sbjct 675 TCCTACAACACGCAATGGGATTGGTTTTCCACTTTCTAG-TAAATGAT 721 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 33908049225 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5