BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg948358 Length=1037 Score E Sequences producing significant alignments: (Bits) Value AT5G45980.1 | Symbols: WOX8, STPL | WUSCHEL related homeobox 8 ... 1448 0.0 > AT5G45980.1 | Symbols: WOX8, STPL | WUSCHEL related homeobox 8 | chr5:18648909-18650836 FORWARD LENGTH=1128 Length=1128 Score = 1448 bits (784), Expect = 0.0 Identities = 937/1009 (93%), Gaps = 17/1009 (2%) Strand=Plus/Plus Query 23 catcatcatG---TCCTCAAACAAAAATTGGCCAAGCATGTTCAAATCCAAACCTTGCAA 79 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6 CATCATCATGTCCTCCTCAAACAAAAATTGGCCAAGCATGTTCAAATCCAAACCTTGCAA 65 Query 80 CAATAATCATCATCATCAACATGAAATCGATACTCCATCTTACATGCACTACTCTAATTG 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 66 CAATAATCATCATCATCAACATGAAATCGATACTCCATCTTACATGCACTACTCTAATTG 125 Query 140 CAACCTATCATCTTCCTTTTCTTCAGATCGGGTACCAGATCCTAAACCGAGATGGAACCC 199 ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| || Sbjct 126 CAACCTATCATCTTCCTTTTCCTCAGATCGGATACCAGATCCTAAACCGAGATGGAATCC 185 Query 200 TAAACCGGAGCAGATTCGGATACTCGAATCAATCTTCAATTCCGGTACTGTTAACCCACC 259 |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct 186 TAAACCGGAGCAGATTAGGATACTCGAATCAATCTTCAATTCCGGTACTATTAACCCACC 245 Query 260 TAGAGAGGAGATTCAAAGAATCCGGATCCGGCTTCAAGAGTACGGTCAAATCGGTGATGC 319 ||||||||||||||||||||||||||||||||||||||| || |||||||||||||| || Sbjct 246 TAGAGAGGAGATTCAAAGAATCCGGATCCGGCTTCAAGAATATGGTCAAATCGGTGACGC 305 Query 320 TAATGTGTTTTACTGGTTTCAAAACCGGAAATCTCGAGCAAAACACAAGCTTCGTGTTCA 379 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 306 AAACGTGTTTTACTGGTTTCAAAACCGGAAATCTCGAGCAAAACACAAGCTTCGTGTTCA 365 Query 380 TCACAAAAACCCTAAAATGTCAAAGAAGGACAAGATGGTTATTCCTAATAATGATGCTGA 439 |||||||| |||||||||||||||||||||||||| ||||||||||| || ||| ||||| Sbjct 366 TCACAAAAGCCCTAAAATGTCAAAGAAGGACAAGACGGTTATTCCTAGTACTGACGCTGA 425 Query 440 TCATTGTTTTGGTTTTGTTAACCAAGAAACCGGATTATTTCCGGTTCAAAACAATGAATT 499 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct 426 TCATTGTTTTGGTTTTGTTAACCAAGAAACCGGATTATATCCGGTTCAAAACAATGAGTT 485 Query 500 GGTGGTAACCGAACCGGCCAGTTTTCTATTCCCGGTTCATAATGATCCGAGCGCAGCTCA 559 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||| Sbjct 486 GGTGGTAACCGAACCGGCCGGTTTTCTATTTCCGGTTCATAATGATCCGAGCGCTGCTCA 545 Query 560 ATCAGGGTTTGGTTTTAGTGATTTTGTTGTACCGGTGGTAACGGAAGAAGGGATGGCTTT 619 ||||| |||||||||| | |||||||||||||||||||||||||||||||||||||| || Sbjct 546 ATCAGCGTTTGGTTTTGGCGATTTTGTTGTACCGGTGGTAACGGAAGAAGGGATGGCATT 605 Query 620 CTCTACCGTTAATAACGGCGTTAATTTGGAGACTGATGACAGTTTTGATAAAATTCCGGC 679 |||||||||||||||||||||||||||||||||| | || | |||||||||||||||||| Sbjct 606 CTCTACCGTTAATAACGGCGTTAATTTGGAGACTAACGAAAATTTTGATAAAATTCCGGC 665 Query 680 GATCAATCTATACGGAGGAGATGGAAATGGCGGTGGAAATTGTTTTTCTCCTTTGACTGC 739 ||||||| ||||||| |||||||||||||||||||||||||||||| | | | | | Sbjct 666 GATCAATTTATACGGCGGAGATGGAAATGGCGGTGGAAATTGTTTT-C-C-T----C--C 716 Query 740 TCCTTTGACTGTTCCATTAGCCATCAATCAATCTCAAGAAGAACGAGATATAATATTATC 799 | || ||||||||||||| |||||||||||||||||||| |||||||| || |||||| Sbjct 717 T--TT-GACTGTTCCATTAACCATCAATCAATCTCAAGAAAAACGAGATGTAGGATTATC 773 Query 800 CGGTGATGAAGATGTTG-AGAATAGTGTTTCTCCGGTGCGAATGACGGTGTTTATTAACG 858 ||||| |||||| || | ||| || ||||| ||||||| ||||||||||||||||||||| Sbjct 774 CGGTGGTGAAGACGTCGGAGA-TAATGTTTATCCGGTGAGAATGACGGTGTTTATTAACG 832 Query 859 ACATGCCTTTTGAGGTAGTGCCCGGATTATTCAACGTTAAAGCAGCTTTTGGAAACGATG 918 | |||||| | || |||||| | ||||||||||||||||| |||||||| |||||||||| Sbjct 833 AGATGCCTATCGAAGTAGTGTCTGGATTATTCAACGTTAAGGCAGCTTTCGGAAACGATG 892 Query 919 CAGTTTTGATCAACTCGTTTGGGCAACCTATTCATACAGATGAATTTGGTGTTACTTATC 978 | |||||||||||||||||||| || ||||||| |||||||||||||||||||||||||| Sbjct 893 CCGTTTTGATCAACTCGTTTGGCCAGCCTATTCTTACAGATGAATTTGGTGTTACTTATC 952 Query 979 AACCTCTCCAAAACGGGGCAATCTATTATCTTATTTAGAAGATATTGAA 1027 ||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct 953 AACCTCTCCAAAATGGCGCAATCTATTATCTTATTTAGAAGATATTGAA 1001 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 50836956764 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5