BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg948370 Length=268 Score E Sequences producing significant alignments: (Bits) Value AT5G45905.1 | Symbols: | Encodes a defensin-like (DEFL) family... 307 3e-83 > AT5G45905.1 | Symbols: | Encodes a defensin-like (DEFL) family protein. | chr5:18619461-18619870 FORWARD LENGTH=216 Length=216 Score = 307 bits (166), Expect = 3e-83 Identities = 205/222 (92%), Gaps = 9/222 (4%) Strand=Plus/Plus Query 27 ACTAAACACATTCAACTGTCGTTCACCGTTTTAGCTATCTTCAGCATTTTCGTGCTTGGA 86 ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 4 ACTAAACTTATTCAACTCTCGTTCACCGTTTTAGCTATCTTCAGCATTTTCGTGCTTGGA 63 Query 87 GTGGTCGGAAATGAGTATAAATGTTCGGAAATTCTGTTTCGAAAGAGTAAGTGTGATTAT 146 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 64 GTGGTCGAAAATGAGTATAAATGTTCGGAAATTCTGTTTCGAAAGAGTAAGTGTGATTAT 123 Query 147 CAAGAGTGTGGGTTGATGTGTGTTTTGAAGAGGCAGGGGTTGTCAAGTTGCACTAAACAG 206 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct 124 CAAGAGTGTGGGTTGATGTGTGTTTTGAAGAGGCAGGGGTTGTCAAGTTGCTCTAATGAG 183 Query 207 GGGAGATTTTTTATATGTTCTTGCCAGTATCAATGCCCTTAA 248 || | | || |||||||||||||||||||||||||| Sbjct 184 GGCA--T-----AT--GTTCTTGCCAGTATCAATGCCCTTAA 216 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 12265330756 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5