BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg948472
Length=2582
Score E
Sequences producing significant alignments: (Bits) Value
AT5G45250.1 | Symbols: RPS4 | Disease resistance protein (TIR-N... 1543 0.0
AT5G45060.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 316 5e-85
AT4G19530.1 | Symbols: | disease resistance protein (TIR-NBS-L... 313 7e-84
> AT5G45250.1 | Symbols: RPS4 | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:18321914-18326022 REVERSE LENGTH=3654
Length=3654
Score = 1543 bits (835), Expect = 0.0
Identities = 904/938 (96%), Gaps = 1/938 (0%)
Strand=Plus/Plus
Query 1645 GTTCGATGCCTCCACTGGCTGAAATTCCCATTGGAGACACTTCCAAACGATTTTAACCCG 1704
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1849 GTTCGATGCCTCCACTGGCTGAAATTCCCATTGGAGACACTTCCAAACGATTTCAACCCA 1908
Query 1705 ATTAATCTTGTCGACCTTAAGCTGCCCTACAGTGAGATTGAACAACTTTGGGATGGTGAC 1764
||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||
Sbjct 1909 ATTAATCTTGTCGACCTTAAGCTGCCCTACAGTGAAATGGAACAACTTTGGGAGGGTGAC 1968
Query 1765 AAGGATACACCATGCTTAAGGTGGGTCGATCTCAATCACTCAAGTAAGTTGTGCAGCTTG 1824
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1969 AAGGACACACCATGCTTAAGGTGGGTCGATCTCAATCACTCAAGTAAGTTGTGCAGCTTG 2028
Query 1825 TCAGGGTTATCAAAAGCTGAAAAGCTTGAAAGGTTGAACCTTGAAGGTTGCACAACACTG 1884
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2029 TCAGGGTTATCAAAAGCTGAAAAGCTTCAAAGGTTGAACCTTGAAGGTTGCACAACACTG 2088
Query 1885 AAAGCGTTGCCACACGATATGaaaaaaaTGAAAATGCTTGCTTTCCTGAATCTCAAGAGG 1944
|||||||| ||||| |||||||||||||||||||||||||||||| ||||||| ||| ||
Sbjct 2089 AAAGCGTTTCCACATGATATGAAAAAAATGAAAATGCTTGCTTTCTTGAATCTGAAGGGG 2148
Query 1945 TGCACAAGTCTCGAATCTCTTCCAGAGATGAATTTGATTTCTCTGAAAACACTTACTCTC 2004
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2149 TGTACAAGTCTCGAATCTCTTCCAGAGATGAATTTGATTTCTCTGAAAACACTTACTCTC 2208
Query 2005 AGCAGCTGCTCAACTTTTAAGGAATTTCCGTTGATTTCAGATAATATAGAAACTCTATAC 2064
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2209 AGCGGCTGCTCAACTTTTAAGGAATTTCCGTTGATTTCAGATAATATAGAAACTCTATAC 2268
Query 2065 TTAGATGGCACAGCAATAAGTCAGCTTCCTACGAACATGGAGAAGCTCCAGAGACTTGTT 2124
||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct 2269 TTAGATGGCACAGCAATAAGTCAGCTTCCTATGAACATGGAGAAGCTTCAGAGACTTGTT 2328
Query 2125 GTACTGAATATGAAAGACTGCAAAATGCTGGAGGAAATCCCAGGCCGTGTTGGTGAGCTG 2184
||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 2329 GTATTGAATATGAAAGACTGCAAAATGCTAGAGGAAATTCCAGGCCGTGTTGGTGAGCTG 2388
Query 2185 AAAGCTCTTCAAGAACTGATACTCTCTGATTGTTTAAATCTCAAGATTTTCCCAGAAATC 2244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2389 AAAGCTCTTCAAGAACTGATACTCTCTGATTGTTTAAATCTCAAGATTTTCCCAGAAATC 2448
Query 2245 AACATGAGCTCTTTAAACATTTTACTTTTGGATGGGACAGCCATTGAAGTGATGCCACAA 2304
|||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2449 GACATTAGCTTTTTAAACATTTTACTTTTGGATGGGACAGCCATTGAAGTGATGCCACAA 2508
Query 2305 TTACCCTCACTGCAGTATTTGTGCTTAAGCAGGAATGCTAAGATCAGCTACCTTCCTGAT 2364
||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||| |
Sbjct 2509 TTACCCTCAGTGCAGTATTTGTGCTTAAGCAGAAATGCTAAGATCAGCTGCCTTCCTGTT 2568
Query 2365 GGAATCAGTCGGCTTTCTCAACTTAAATGGCTGGACCTGAAGTATTGTACGAGTCTCACA 2424
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2569 GGAATCAGTCAGCTTTCTCAACTTAAATGGCTGGACCTGAAGTATTGTACGAGTCTTACA 2628
Query 2425 TCAGTGCCAGAGTTTCCACCAAATCTTCAGTGCTTAGATGCACACGGCTGTAGTTCGCTG 2484
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2629 TCAGTTCCAGAGTTTCCACCAAATCTTCAGTGCTTAGATGCACACGGCTGTAGTTCGCTG 2688
Query 2485 AAGACAGTTTCAAAGCCTCCTGGCCCGTATCATGCCAACCGTACAGAATCATTCCACATT 2544
|||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||
Sbjct 2689 AAGACAGTTTCAAAGCCTT-TGGCCCGTATCATGCCAACTGAACAGAATCATTCCACATT 2747
Query 2545 CATTTTCACCAACTGTGAGAACCTGCAACAAGCTGCAA 2582
||||||||||||||||||||||||| ||||||||||||
Sbjct 2748 CATTTTCACCAACTGTGAGAACCTGGAACAAGCTGCAA 2785
Score = 1356 bits (734), Expect = 0.0
Identities = 798/830 (96%), Gaps = 0/830 (0%)
Strand=Plus/Plus
Query 813 AGATCCATACAGTCAACTGCATGAACGCAAAGTTCTTGTTGTACTTGATGATGTTAGTAA 872
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 894 AGATCCATACAGTCAACTGCATGAACGCAAAGTGCTTGTTGTACTTGATGATGTTAGTAA 953
Query 873 AAGGGAACAAATAGATGCTCTTCGTGAGATACTAGACTGGATTAAGGAGGGTAAGGAGGG 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 954 AAGGGAACAAATAGATGCTCTTCGTGAGATACTAGACTGGATTAAGGAGGGTAAGGAGGG 1013
Query 933 AAGCAGGGTTGTCATTGCAACAAGCGACATGTCTTTAACAAATGGTTTGGTTGATGATAC 992
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1014 AAGCAGGGTTGTCATTGCAACAAGCGACATGTCCTTAACAAATGGTTTGGTTGATGATAC 1073
Query 993 TTACATGGTTCAAAATTTGAACCACAGAGATAGCTTACAACTATTTCACTATCATGCATT 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1074 TTACATGGTTCAAAATTTGAACCACAGAGATAGCTTACAACTATTTCACTATCATGCCTT 1133
Query 1053 CATTGATGATCAAGCCAATCCTCAAAAGAAAGATTTCATGAAGCTGTCAGAAGGGTTTGT 1112
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1134 TATTGATGATCAAGCCAATCCTCAAAAGAAAGATTTCATGAAGCTGTCAGAAGGGTTTGT 1193
Query 1113 ACATTACGCCAGAGGCCATCCACTAGCCCTGAAAATACTGGGTGGAGAGCTTAATAAGAA 1172
|||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||
Sbjct 1194 ACATTACGCCAGAGGCCATCCACTAGCCCTCAAAGTATTGGGTGGAGAGCTTAATAAGAA 1253
Query 1173 AAGTATGGATCATTGGAATTCAAAAATGAAGAAACTTGCACAGAGTCCCAGCCCTAATAT 1232
||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 1254 AAGTATGGATCATTGGAATTCGAAAATGAAGAAACTTGCACAGAGCCCCAGCCCTAATAT 1313
Query 1233 TGTAAGTGTCTTCCAAGTGAGTTATGATGAATTGACTTCAGCGCAGAAAGACGCATTTCT 1292
||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct 1314 TGTCAGTGTCTTCCAAGTGAGTTATGATGAATTGACTACAGCGCAGAAAGATGCATTTCT 1373
Query 1293 CGACATAGCCTGTTTTAGATCACAGGACAAGAATTATGTAGAAAGTTTACTGGCTTCATC 1352
||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 1374 CGACATAGCCTGTTTCAGATCACAGGACAAGGATTATGTAGAAAGTCTACTGGCTTCATC 1433
Query 1353 TGATCTTGGATCTGCTGAAGCAATGAGTGCAGTAAAAAGTCTCACGGATCAGTTCCTGAT 1412
||| ||||| || |||||||||||||||||||| ||| |||||||||| ||||||||||
Sbjct 1434 TGACCTTGGTTCGGCTGAAGCAATGAGTGCAGTCAAATCTCTCACGGATAAGTTCCTGAT 1493
Query 1413 TAATACTTGTGATGGGCGGGTGGAGATGCATGATCTATTGTATAAATTTTCAAGGGAACT 1472
||||||||||||||| || |||||||||||||||||||| |||||||||||||||||| |
Sbjct 1494 TAATACTTGTGATGGCCGAGTGGAGATGCATGATCTATTATATAAATTTTCAAGGGAAGT 1553
Query 1473 TGATCTTAAGGCATCTAATCAGAATGGTAGCAGACAACGGAGGCTGTGGCTCCATCAAGA 1532
|||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 1554 TGATCTGAAGGCATCTAATCAGGATGGTAGCAGACAACGGAGGCTGTGGCTCCATCAACA 1613
Query 1533 CATAATCAAGGGAGGCATAATTAATGTACTGCAAAATAAAATGAAAGCTGCCAATGTTAG 1592
||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct 1614 CATAATCAAGGGAGGCATAATCAATGTATTGCAAAATAAAATGAAAGCTGCCAATGTTAG 1673
Query 1593 AGGTATTTTCCTAGACTTGTCTGAAGTGAAAGACGAAACGAGCTTAGACC 1642
|||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1674 AGGTATTTTCCTAGACTTGTCTGAAGTGGAAGACGAAACGAGCTTAGACC 1723
Score = 920 bits (498), Expect = 0.0
Identities = 569/603 (94%), Gaps = 6/603 (1%)
Strand=Plus/Plus
Query 22 ATGGAGACATCATCAATTTCCACGGTCGACGACCAGCCACCGCAGCATCAGGTGTTCATC 81
|||||||||||||| |||||||| || || ||| ||||||||||||||||||||||||||
Sbjct 1 ATGGAGACATCATCTATTTCCACTGTGGAAGACAAGCCACCGCAGCATCAGGTGTTCATC 60
Query 82 AATTTCCGTGGGGCGGATTTGCGCCTGAGATTCGTCAGCCATCTCGTCAA-GGACTTGAA 140
|||||||||||||| |||||||||| ||||||||||||||||||||| || || ||||||
Sbjct 61 AATTTCCGTGGGGCAGATTTGCGCCGGAGATTCGTCAGCCATCTCGT-AACGGCCTTGAA 119
Query 141 ATTGAACAACATTAACGTCTTTATCGACGACTATGAAGACAGAGGTCAACCTCTAGATGT 200
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120 ATTGAACAACATCAACGTCTTTATCGACGACTATGAAGACAGAGGTCAACCTCTAGATGT 179
Query 201 ACTGCTGAAGAGGATAGAGGAGTCCAAAATCGTTTTGGCTATCTTCTCCGGCAACTACAC 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 ACTGCTGAAGAGGATAGAGGAGTCCAAAATCGTTTTGGCTATCTTCTCCGGCAACTACAC 239
Query 261 CGAGTCAATCTGGTGCGTGAGAGAGCTGGAGAAGATCAAGGATTGTACGGATGAAGGAAC 320
||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 240 CGAGTCAGTCTGGTGCGTGAGAGAGCTGGAGAAGATCAAAGATTGTACGGATGAAGGAAC 299
Query 321 ACTTGTTGCGATTCCAATCTTCTACAAGCTCGAGCCATCCACCGTTAGAGATTTGAAAGG 380
||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 300 ACTCGTTGCGATTCCAATCTTCTACAAGCTGGAGCCATCCACCGTTAGAGATTTGAAAGG 359
Query 381 AAAGTTCGGTGATAGATTTAGAAGTATGGCTAAGGGTGATGAGAGGAAGAAGAAGTGGAA 440
||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||
Sbjct 360 AAAGTTCGGTGATAGATTTAGGAGTATGGCTAAGGGTGATGAGAGGAAAAAGAAATGGAA 419
Query 441 AGAAGCTTTTAACTTGATTCCTAACATTATGGGCATCACCATTGACAAGAAAAGTGTCGA 500
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct 420 GGAAGCTTTTAACTTGATTCCTAACATTATGGGCATCATCATTGACAAGAAAAGTGTGGA 479
Query 501 GAGTGAGAAAGTCAATGAAATTGTGAAGGCGGTGAAGACAGCGCTGACCGGGATTCCTTC 560
||||||||||||||||||||||||||||||||||||||||||| ||||||| || || |
Sbjct 480 GAGTGAGAAAGTCAATGAAATTGTGAAGGCGGTGAAGACAGCGTTGACCGGAATACCACC 539
Query 561 GGAGGGAAGCCAAAATGCCGTCGTGGAG-GCTTTAGG-AAGTGGCAACGCTGGAACTTCC 618
||||||||| || || |||||||||| | |||||||| || | |||||||||||||||||
Sbjct 540 GGAGGGAAGTCACAACGCCGTCGTGG-GTGCTTTAGGTAA-TAGCAACGCTGGAACTTCC 597
Query 619 TCA 621
|||
Sbjct 598 TCA 600
Score = 309 bits (167), Expect = 9e-83
Identities = 186/195 (95%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 622 AGAAGTTGGACCTTCATAAATACAAGGG-ACTCGTTTCATTGGACTT-TTGGGATGCCCG 679
|||||||||| | | ||||||||||||| |||||| |||||||| || ||||||||||||
Sbjct 656 AGAAGTTGGATCGTGATAAATACAAGGGAACTCGTATCATTGGAGTTGTTGGGATGCCCG 715
Query 680 GAATTGGTAAAACCACACTGCTGAAACAGCTATATAAGACGTGGCAGGGCAAGTTTTCGA 739
||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct 716 GAATTGGTAAAACCACACTCCTGAAAGAGCTATATAAGACGTGGCAGGGCAAGTTTTCGA 775
Query 740 GGCATGCGCTAATCGATCAAATCCGTGTAAAGTCCAAGCACTTGGAGTTGGATCGCTTGC 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 776 GGCATGCGCTAATCGATCAAATCCGTGTAAAGTCCAAGCACTTGGAGTTGGATCGCTTGC 835
Query 800 CTCAAATGCTCTTAG 814
|||||||||||||||
Sbjct 836 CTCAAATGCTCTTAG 850
> AT5G45060.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:18182038-18186495 FORWARD LENGTH=3926
Length=3926
Score = 316 bits (171), Expect = 5e-85
Identities = 217/239 (91%), Gaps = 4/239 (2%)
Strand=Plus/Plus
Query 1643 AGGTTCGATGCCTCCACTGGCTGAAATTCCCATTGGA-GACACTTCCAAACGATTTTAAC 1701
||||||||||||| |||||||||||||||||||| || || |||||||||||||||| ||
Sbjct 1847 AGGTTCGATGCCTTCACTGGCTGAAATTCCCATTAGAGGA-ACTTCCAAACGATTTTGAC 1905
Query 1702 CCGATTAATCTTGTCGACCTTAAGCTGCCCTACAGTGAGATTGAACAACTTTGGGATGGT 1761
||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||
Sbjct 1906 CCGATTAATCTCGTCGACCTTAAGCTGCCATACAGTGAGATTGAACGACTTTGGGATGGT 1965
Query 1762 GACAAGGATACACCATG-CTTAAGGTGGGTCGATCTCAATCACTCAAGTAAGTTGTGCAG 1820
| |||||||||||| | ||||| |||||||||||||||||||||||||||||||||||
Sbjct 1966 GTTAAGGATACACCA-GTCTTAAAATGGGTCGATCTCAATCACTCAAGTAAGTTGTGCAG 2024
Query 1821 CTTGTCAGGGTTATCAAAAGCTGAAAAGCTTGAAAGGTTGAACCTTGAAGGTTGCACAA 1879
||||||||| |||||||| ||| |||| ||| |||| ||||||||||||| |||||||
Sbjct 2025 CTTGTCAGGATTATCAAAGGCTCAAAATCTTCAAAGACTGAACCTTGAAGGGTGCACAA 2083
> AT4G19530.1 | Symbols: | disease resistance protein (TIR-NBS-LRR
class) family | chr4:10651744-10657282 FORWARD LENGTH=3914
Length=3914
Score = 313 bits (169), Expect = 7e-84
Identities = 717/967 (74%), Gaps = 95/967 (10%)
Strand=Plus/Plus
Query 1643 AGGTTCGATGCCTCCACTGGCTGAAA-TT-CCCATTGGA-GACACTTCCA-AACGATTTT 1698
|||| ||||| | || ||||| ||| || |||| || || ||||||| || |||||
Sbjct 2080 AGGTCCGATGTTTGCATTGGCT-AAATTTCCCCA-AAGATGA-ACTTCCACAA-GATTTC 2135
Query 1699 AACCCGATTAATCTTGTCGACCTTAAGCTGCCC-TACAGTGAGATTGA-ACA-ACTTTGG 1755
| ||| | ||||| || || |||||||| ||| |||||| ||||| | ||| | |||||
Sbjct 2136 ATCCCCAAGAATCTCGTAGATCTTAAGCT-CCCTTACAGTAAGATT-AGACAGA-TTTGG 2192
Query 1756 -GATGGTGACAAGGATACACC-ATGCTTAAGGTGGGTCGATCTCAATCACTCAAGTAAGT 1813
|| | || |||||| |||| | | |||||||||||||||||||||||||||||||||
Sbjct 2193 AGA-GAAGAGAAGGATGCACCAAAAC-TAAGGTGGGTCGATCTCAATCACTCAAGTAAGT 2250
Query 1814 TGTGCAG-CTTGTCAGGGTTATCAAAAGCTGAAAAGCTTGAAAGGTTGAACCTTGAAGGT 1872
|| | | |||||||||| ||||| | ||| ||| |||||||| |||||||||||||||
Sbjct 2251 TG-GAAAACTTGTCAGGGCTATCACAGGCTCTAAATCTTGAAAGATTGAACCTTGAAGGT 2309
Query 1873 TGCACAACACTGAAAGCGTTGCCACACGATATGaaaaaaaTGAAAA-TGCTTGCTTTCCT 1931
|||||| |||||||| |||||| | | | | |||| ||| || | |||| ||||||
Sbjct 2310 TGCACAGCACTGAAAACGTTGCTTCTGGGTCCGGAAAATATGGCAAGT-CTTGTTTTCCT 2368
Query 1932 GAATCTCAAGAGG-TGCACAAGTCTCGAATCTCTTCC-AGAGATGAATTTGATTTCTCTG 1989
|||| | || ||| ||||| |||| || |||||||| | |||| ||||||| ||||||
Sbjct 2369 GAATTTGAA-AGGGTGCACGGGTCTTGAGTCTCTTCCCA-AGATTAATTTGAGATCTCTG 2426
Query 1990 AAAACACTTACTC-TCAGCAGCTGCTCAA-CTTTTAAGGAATTTCCGTTGATTTCAGATA 2047
|| || || | || |||||| ||| |||| ||| | ||| ||| | |||||||||| |
Sbjct 2427 AAGACTCTCA-TCCTCAGCAACTGTTCAAACTTGGA-GGAGTTTTGGGTGATTTCAGA-A 2483
Query 2048 A-TATAGAAACTCTATACTTAGATGGCACAGCAATAAGT-CAGCTTCCT-ACGAACATGG 2104
| | || | || ||||| || |||||||| ||||||| || |||||| | || |||||
Sbjct 2484 ACTTTATATACGCTATATTTGGATGGCACTGCAATAAAAACA-CTTCCTCAAGA-CATGG 2541
Query 2105 -AGAAGCTC-CAGAGACTTGTTGTACTGA-ATATGAAAGACTGCAAAATGCTGGAGGAAA 2161
| ||||| || || || || | | | | |||||||||||| | ||||| | ||
Sbjct 2542 TA-AAGCTAACA-AGCCTCGTCAAATT-ATACATGAAAGACTGCGAGATGCTCGTT-AAG 2597
Query 2162 -T-CCC-AGGCCGTGTTGGTGAGCTGAAAGCTCTTCAAGAACT-GATACT-CTCTGATTG 2216
| ||| | | | ||| ||||||||| ||| |||||||| | || | ||||| |||
Sbjct 2598 CTTCCCGAAGAA-T-TTGACAAGCTGAAAGTTCTGCAAGAACTAG-TA-TGCTCTGGTTG 2653
Query 2217 TTTAA-ATCTCAAG-ATTTTCCCAGAA---ATCAA---CATG-AGCT-CTTTAAACATTT 2266
| || | |||| | | | ||||||| || || |||| | | ||| | ||||
Sbjct 2654 TAAAAGA-CTCA-GTAGTCTCCCAGATGTGATGAAGAACATGCAA-TGCTTGCAG-ATTT 2709
Query 2267 TACTT-TTGGATGGGACAGCCATTG-AAGTGATGCCACA-ATTACCCTCACT-GCAGTAT 2322
|||| ||| |||| ||||| || || ||| || || || | ||||||| | || |
Sbjct 2710 TACTGCTTG-ATGGAACAGCAATAACAAA-GATTCCTCATAT-ATCCTCACTTG-AGCGT 2765
Query 2323 TTGTGCTTAAGCAGGAATGCTAAGATCAGCTACCTTCCTGA-TGGA-AT-CAGTCGGCTT 2379
| ||||||||||| || | |||||||| | ||| | || || | || | ||| ||||
Sbjct 2766 CTATGCTTAAGCAGAAACGAGAAGATCAGTTGTCTTTC-GAATG-ATATTC-GTCTGCTT 2822
Query 2380 TCTCAACTTAAATGGCTGGACCTGAAGTATTGTACGAGTCTCACATC-AGTGCCAGAGTT 2438
|||||||| |||||||||||| ||||||| ||||||| || || | | |||||| |
Sbjct 2823 TCTCAACTGAAATGGCTGGACTTGAAGTACTGTACGAAACTTGTGTCTATT-CCAGAGCT 2881
Query 2439 TCCACCAAATCTTCAGTGCTTAGATGCACACGGCTGT-AGTTCGCTGAAGA-CAGTTTCA 2496
|||| ||||||||||||||||||||||| |||| ||| | | | | || | ||||| |
Sbjct 2882 TCCAACAAATCTTCAGTGCTTAGATGCAAACGGATGTGAAT-CATT-AACAACAGTTGCG 2939
Query 2497 AAGCCTCCTGGCCCGTA-TCAT--GCCAACCGTA-CAGAATCATTCCACATTCATTTTCA 2552
|| || | |||| || |||| |||||| | | |||| ||||||||||||||||||||
Sbjct 2940 AATCCAC-TGGC---TACTCATTTGCCAACGG-AGCAGATTCATTCCACATTCATTTTCA 2994
Query 2553 CCAACTG 2559
| |||||
Sbjct 2995 CAAACTG 3001
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 128176539365
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5