BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg948566
Length=3535
Score E
Sequences producing significant alignments: (Bits) Value
AT5G45060.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 2870 0.0
AT5G45250.1 | Symbols: RPS4 | Disease resistance protein (TIR-N... 1131 0.0
> AT5G45060.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:18182038-18186495 FORWARD LENGTH=3926
Length=3926
Score = 2870 bits (1554), Expect = 0.0
Identities = 1840/1980 (93%), Gaps = 11/1980 (1%)
Strand=Plus/Plus
Query 589 CATCGGAGGGAAGTCGAAA---GGTCGCTGTGGATCGATCAGAAATTATCGACACTAGAA 645
||| ||||||||| | ||| |||| ||||||||| |||| ||| ||| |||||| ||
Sbjct 533 CATTGGAGGGAAGCCAAAAGGTGGTCTCTGTGGATCCATCACAAAGTATTGACACTCTAA 592
Query 646 CTTCGGCAGAAGGCGAAAAGGATAAGACTTTTGGAATCAAACAACAGTTGAAGGAGTTGG 705
||||| || ||| ||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 593 GTTCGGTAGGAGGTGAAAAGGATAAGACTTTTGGAATCAAACAACGGTTGAAGGAGTTGG 652
Query 706 AAGATAAGTTGGATCTTATTAAATACAAGGGAACTCGTGTCATTGGAGTTGTTGGGATGC 765
|||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 653 AAGAGAAGTTGGATCTTGTTAAATACAAGGGAACTCGTGTCATTGGAGTTGTTGGGATGC 712
Query 766 CGGGAATTGGTAAAACCACGCTGCTGAAAGAGCTCTATAAGACATGGAAGGGAAAGTTTT 825
| |||||||| |||||||| ||| ||||||||||||||||||| ||| |||| |||||||
Sbjct 713 CTGGAATTGGCAAAACCACACTGGTGAAAGAGCTCTATAAGACCTGGCAGGGCAAGTTTT 772
Query 826 CGAGGTATGCGTTAATCGATCAAATCCGTGGAAAGTCAAATAACTTCAGGTTAGAGTGCT 885
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 773 CGAGGTATGCGTTGATCGATCAAATCCGTGGGAAGTCAAATAACTTCAGGTTAGAGTGCT 832
Query 886 TGCCTACATTGCTTTTAGAGAAATTACTACCGGAGTTGAATAATCCTCAAATAGATAGTG 945
||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 833 TGCCTACTTTGCTTTTAGAGAAGCTACTACCGGAGTTGAATAATCCTCAACTAGATAGTA 892
Query 946 TTGAAGAACCATACAAAACTCATAAGGGTCTGCTGCGCGAACGCAAAGTTCTTGTCGTTC 1005
||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| |
Sbjct 893 TTGAAGAACCATACAAAACTCATAAGGGTCTACTGCGTGAACGCAAAGTTCTCGTCGTCC 952
Query 1006 TTGATGATGTTAGTGA-AAGGGAACAAATATATGCTCTTCTTGGGAAATATGATCTTCAA 1064
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 953 TTGATGATGTTAGT-AGAAGGGAACAAATATATGCTCTTCTTGGGAAATATGATCTTCAC 1011
Query 1065 AATAAGCATGAGTGGATCAAAGATGGCAGCAGGATTGTCATTGCGACAAACGACAAGTCC 1124
| ||| ||||||||||||||||||||||||||||| ||||||| || ||||| | |||
Sbjct 1012 AGTAAACATGAGTGGATCAAAGATGGCAGCAGGATCATCATTGCAACGAACGATATCTCC 1071
Query 1125 TTATTGAAGGGTCTTGTTCATGACACTTACGTGGTCCGACAGTTAAACCACAGAGACGGT 1184
| |||||||||||| |||||||||||||| ||||| || || |||||||||||||||||
Sbjct 1072 TCATTGAAGGGTCTCGTTCATGACACTTATGTGGTTCGGCAATTAAACCACAGAGACGGC 1131
Query 1185 TTACAACTTTTTCGCTATCATGCCTTTCATGATGATCAAGCCATTACTCCCAAGGTGGAT 1244
|||||||||||||||||||| ||||||||| |||||||||||| | |||| |||||||||
Sbjct 1132 TTACAACTTTTTCGCTATCACGCCTTTCATTATGATCAAGCCACTCCTCCAAAGGTGGAT 1191
Query 1245 TTCATGAAGCTTTCTGATGAGTTCGTGCATTATGCCAGAGGCCATCCACTAGCTCTCAAA 1304
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 1192 TTCATGAAGCTTTCTGATGAGTTTGTGCATTATGCTAGAGGCCATCCACTAGCTCTCAAA 1251
Query 1305 ATATTGGGTAGAGAGCTTTATGAGAAAAATATGAAGCATTGGGAAACAAAACTGAAAATA 1364
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1252 ATATTGGGTAGAGAGCTTTATGAGAAAAATATGAAGCATTGGGAAACAAAACTGATAATA 1311
Query 1365 CTCGCTCAAAGTCCCACCACTTATATTGGAGAGGTCGTGCAAGTAAGTTTTGATGAATTG 1424
|| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 1312 CTTGCTCAAAGTCCCACCACTTATATTGGAGAAGTCGTGCAAGTAAGTTATGATGAATTG 1371
Query 1425 AGTATGGCGCAGAAAGATGCATTTCTCGACATAGCCTGTTTCAGATCGCAGGATGTGGAT 1484
||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 1372 AGTTTGGCGCAGAAAGATGCATTTCTCGACATAGCTTGTTTCAGATCACAGGATGTGGAT 1431
Query 1485 TATGTAGAAAGTTTACTGGTTTCGTCTGACCCCGGATCTGCTGAAGCAATTAAAGCTCTC 1544
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 1432 TATGTAGAAAGTTTACTGGTTTCGTCTGACCCTGGATCTGCTGAAGCAATAAAAGCTCTC 1491
Query 1545 AAGAATAAGTTCCTGATTGATACTTGTGACGGCCGTGTGGAGATGCATGATCTACTGTAT 1604
|||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1492 AAGAATAAGTTCTTGATTGATACATGTGACGGCCGTGTGGAGATGCATGATCTACTGTAT 1551
Query 1605 ACATTTTCTAGGGAACTTGATCTTAGAGCATCCACTCAAGGTGGTAGCAAACAACGGAGG 1664
| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct 1552 AGATTTTCTAGGGAACTTGATCTTAAAGCATCCACTCAAGGTGGTAGCAAACAACGAAGG 1611
Query 1665 TTGTGGCTCCAG-CAAGACATAATTAATGTACAACAGAAAACAATGGGAGCTGCCGATGT 1723
|| ||| ||| | |||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 1612 TTATGGGTCC-GTCAAGACATAATTAATGTACAGCAGAAAACAATGGGAGCTGCAAATGT 1670
Query 1724 CAGAGGTATTTTCCTAGATTTGTCTGAAGTGAAGGGTGAAACAAGCTTAGATCGTGGACA 1783
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||
Sbjct 1671 TAGAGGTATTTTCCTAGATTTGTCTGAAGTGAAGGTTGAAACAAGCTTAGACCGTGAACA 1730
Query 1784 CTTGAAAAAGATGTGCAATCTCCGGTATCTCAAATTCTACAATTCTCATTGTCCTCATGA 1843
||| || || ||| ||||||||||||||||||| || |||||||| ||||| ||||| ||
Sbjct 1731 CTTCAAGAATATGCGCAATCTCCGGTATCTCAAGTTATACAATTCACATTGCCCTCACGA 1790
Query 1844 ATGTAAAACCAACCATAAGATAAACATGCCTGATGGACTGGAGCTACCATTGAAAGAGGT 1903
|||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1791 ATGTCTAACCAATAATAAGATAAACATGCCTGATGGACTTGAGCTACCATTGAAAGAGGT 1850
Query 1904 CCGATGCCTTCACTGGCTGAAATTCCCATTGGAGGAACTTCCAAACGATTTTGACCCGAT 1963
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1851 TCGATGCCTTCACTGGCTGAAATTCCCATTAGAGGAACTTCCAAACGATTTTGACCCGAT 1910
Query 1964 TAATCTCGTCGACCTTAAGCTGCCATACAGTGAGATTGAACGACTTTGGGAGGGTGTTAA 2023
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1911 TAATCTCGTCGACCTTAAGCTGCCATACAGTGAGATTGAACGACTTTGGGATGGTGTTAA 1970
Query 2024 GGATACGCCTGTCTTAAAATGGGTTGATCTCAATCACTCAAGTAAGTTGTGCAGCTTGTC 2083
|||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1971 GGATACACCAGTCTTAAAATGGGTCGATCTCAATCACTCAAGTAAGTTGTGCAGCTTGTC 2030
Query 2084 AGGATTATCAAAGGCTCAAAATCTTCAAAGACTGAACCTTGAAGGGTGCACAAGTCTTGA 2143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2031 AGGATTATCAAAGGCTCAAAATCTTCAAAGACTGAACCTTGAAGGGTGCACAAGTCTTGA 2090
Query 2144 ATCTCTTCGAGATGTGAATTTGATGTCTTTGAAAACTCTCACCCTCAGCAACTGCTCAAA 2203
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2091 ATCTCTTCGAGATGTGAATTTGACGTCTTTGAAAACTCTCACCCTCAGCAACTGCTCAAA 2150
Query 2204 CTTCAAGGAATTTCCATTGATTCCAGAAAATCTAGAAGCTTTATACTTGGACGGAACAGT 2263
||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||| |
Sbjct 2151 CTTCAAGGAATTTCCATTGATTCCAGAAAATTTAAAAGCTTTATACTTGGACGGGACA-T 2209
Query 2264 -GATAAGTCAACTTCCTGACAACGTAGTGAACCTCAAGAGACTCGTCTTATTGAATATGA 2322
|||||||||||||||||||||||| | ||||||||| ||||| ||||||||||||||||
Sbjct 2210 CGATAAGTCAACTTCCTGACAACGTGGGGAACCTCAAAAGACTTGTCTTATTGAATATGA 2269
Query 2323 AGGACTGCAAAATGCTGGAGAATATCCCGACATGTGTTGGTGAGCTGAAAGCTCTTCAAA 2382
||||||||||| ||||||||| |||||| || |||||| ||||||||||| |||||||||
Sbjct 2270 AGGACTGCAAAGTGCTGGAGACTATCCCTACCTGTGTTAGTGAGCTGAAAACTCTTCAAA 2329
Query 2383 AACT-GATACTCTCTGGTTGTTTAAAGCTCAAAGAATTTCCAGAAATCAACAAGAGCTCT 2441
|||| | |||| || ||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct 2330 AACTTG-TACTTTCAGGTTGTTCAAAGCTCAAGGAATTTCCAGAAATCAACAAGAGCTCT 2388
Query 2442 TTAAAAATTTTACTTCTGGATGGGACATCCATCAAAACAATGCCGCAGTTACCTTCAGTG 2501
||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||
Sbjct 2389 TTAAAAATTTTACTTCTAGATGGGACATCCATCAAAACGATGCCGCAGTTACCCTCAGTA 2448
Query 2502 CAGTATTTATGCTTAAGCAGAAATGATCAGATCAGCTACCTTCCGGTTGGCATCAATCAA 2561
||||||||||||||||||||||||||||| ||| ||||||||| | |||||||||||||
Sbjct 2449 CAGTATTTATGCTTAAGCAGAAATGATCATCTCATCTACCTTCCAGCTGGCATCAATCAA 2508
Score = 1378 bits (746), Expect = 0.0
Identities = 902/977 (92%), Gaps = 12/977 (1%)
Strand=Plus/Plus
Query 2562 CTTACATATGTTCCAGAATTGCCACCAACCCTCCAGTACTTAGATGCACACGGCTGTAGC 2621
||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||
Sbjct 2551 CTTACATATGTTCCAGAGTTGCCACCAACTCTCCAGTACTTAGATGCACATGGCTGTAGC 2610
Query 2622 TCACTGAAGAATGTTGCAACACCACTGGCCCGTATCGTGTCAACCGTGCAGAACCATTGC 2681
||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |
Sbjct 2611 TCACTGAAGAATGTTGCAAAACCACTGGCCCGTATCATGTCAACCGTGCAGAACCATTAC 2670
Query 2682 ACTTTCAACTTCACCAACTGTGGTAACCTGGAGCAAGCTGCAAAGGAGGAAATCACATCA 2741
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2671 ACTTTCAATTTCACCAACTGTGGTAACCTGGAGCAAGCTGCAAAGGAGGAAATCACATCG 2730
Query 2742 TATGCTCAAAGGAAATGCCAGTTACT-TCCAGATGCTCGTAAACATTACAACGAGGGTCT 2800
||||||||||| ||||| ||||| || | ||||||| |||||||| ||||| |||||
Sbjct 2731 TATGCTCAAAGAAAATGTCAGTTGCTGT-CAGATGCACGTAAACACTACAATGAGGG--- 2786
Query 2801 TAACTCAGAGGCTTTGTTCAGCACTTGTTTTCCTGGATGTGAAGTGCCTTCATGGTTTGG 2860
| ||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct 2787 T---TCAGAGGCTTTGTTCAGCACTTGCTTTCCTGGATGTGAGGTGCCTTCGTGGTTTGG 2843
Query 2861 GCATGAAGTTGTTGGGTCTCTGTTGCAACGAAAACTCCTCCCACATTGGCATGACAAGAG 2920
||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2844 TCATGAAGCGGTTGGATCTCTGTTGCAAAGAAAACTCCTCCCACATTGGCATGACAAGAG 2903
Query 2921 GCTTTCTGGAATAGCTCTATGTGCTGTAGTCTCATTTCTTGACAACCAAGATCAAATCAG 2980
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||
Sbjct 2904 GCTTTCTGGAATAGCTCTATGTGCTGTAGTCTCATTTCCTGACAGCCAAGATCAACTCAG 2963
Query 2981 CTGCTTCTCGGTGACATGTACCTTTAAAATAAAAGCTGAAGACAAGTCTTGGGTCCCCTT 3040
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2964 CTGCTTCTCGGTGACATGCACCTTTAAAATAAAAGCTGAAGACAAGTCTTGGGTCCCCTT 3023
Query 3041 TACTTGCCCAGTAGGAATTTGGACTAGAGAGGGAGACCAGAAAGACAAGATTGAGTCAGA 3100
||||||||| |||||||||||||||||||||||| || ||||||||| ||||||||| ||
Sbjct 3024 TACTTGCCCGGTAGGAATTTGGACTAGAGAGGGAAACAAGAAAGACAGGATTGAGTCGGA 3083
Query 3101 TCATGTTTTTATAGCCTACATTAGTTGCCCACATTCAATAAGGTGTCTCGAAGACGA-GA 3159
||||||||| ||||||||||||||| |||||||||||||||||||||||||||| || ||
Sbjct 3084 TCATGTTTTCATAGCCTACATTAGTAGCCCACATTCAATAAGGTGTCTCGAAGA-GAAGA 3142
Query 3160 ATTCTGATAAATGCAATTTTACG-GAAGCCTCCCTTGAGTTTACGGTGACAAGTGGTACA 3218
| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||
Sbjct 3143 ACTCTGATAAATGCAATTTTA-GTGAAGCCTCCCTTGAGTTTACGGTGACAAGTGATACA 3201
Query 3219 AGTGGTGTAGGAGTATTCAAGGTGTTGAAGTGCGGATTGAGTTTGGTGTATGAAAATGAT 3278
|||||| | |||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 3202 AGTGGTATTGGAGTATTCAAGGTTTTGAAGTGTGGATTGAGTTTGGTGTATGAAAATGAC 3261
Query 3279 AAAAACAAAAACAGTTCTCTTGAGGCAAAGTATGAGGTTCCTATTGAAGTGAGCTTTCAA 3338
||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct 3262 AAAAACAAAAACAGTTCTCTTGAGGCAAAGTATGATGTTCCTGTTGAAGTGAGCTTTCAA 3321
Query 3339 AAACCAGAACACGGGATAATGGAGGAGgaaaaaaataaaaacaaaagaagaagtgatgat 3398
|||||||||||||||||||||||||||| | | ||| ||||||||||||||||||||||
Sbjct 3322 GAACCAGAACACGGGATAATGGAGGAGGAGAGATATATAAACAAAAGAAGAAGTGATGAT 3381
Query 3399 agaaggccaaaaaagaagcgaaaaacaagaagGGATGATATAATGATAATATCCACCGTC 3458
||| | |||||||||||| | || |||| |||||||||||| |||||||||||||| |||
Sbjct 3382 AGACGACCAAAAAAGAAGAGGAAGACAAAAAGGGATGATATTATGATAATATCCACTGTC 3441
Query 3459 ACTCAAACTTGTGGTGCAAGTGTAGCTTCAAGAATGGAAGATAAACTCAGTGGTTAAGCA 3518
||||||||||||| | |||||||| | ||||||| ||||||||| ||| ||||||||||
Sbjct 3442 ACTCAAACTTGTGTTCCAAGTGTAAATGCAAGAATAGAAGATAAAGTCACTGGTTAAGCA 3501
Query 3519 AATGGTTGAAAAATCTC 3535
|||||||||||||||||
Sbjct 3502 AATGGTTGAAAAATCTC 3518
Score = 769 bits (416), Expect = 0.0
Identities = 519/568 (91%), Gaps = 10/568 (2%)
Strand=Plus/Plus
Query 30 TCCTCCTCCTCCTCCGATCTCCCACCGCAACAACATCAAGTATTCATCAATTTCCGTGGA 89
||||| |||||| ||| ||||||| | | |||||||||||||||||||||||||||||||
Sbjct 10 TCCTCTTCCTCCACCGGTCTCCCA-C-C-ACAACATCAAGTATTCATCAATTTCCGTGGA 66
Query 90 GAAGATTTACGCCTGGGATTCGTCAGCCATCTCGTCGAAGCCTTAGAAAACGATAACATA 149
||||||||||| || |||||||| |||||||| || ||||| ||||||||||||||||||
Sbjct 67 GAAGATTTACGACTCGGATTCGTAAGCCATCTAGTAGAAGCTTTAGAAAACGATAACATA 126
Query 150 AAAGTCTTCATCGACAATTACGCAGACAAAGGCGAACCTCTAGAAACACTTTTAACTAAG 209
||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||
Sbjct 127 AAAGTCTTCATCGACAACTACGCAGACAAAGGCGAACCTTTAGAAACACTTTTAACCAAG 186
Query 210 ATACAAGAGTCTCGAA-TCGCTCTAGCTATCTTCTCTGGTAAGTACACAGAATCAACATG 268
||||| || || | || ||||||||||||||||||| || |||||||| |||||||||||
Sbjct 187 ATACATGACTC-CAAAATCGCTCTAGCTATCTTCTCCGGGAAGTACACTGAATCAACATG 245
Query 269 GTGCTTGAGAGAGCTAGCGATGATCAAAGATTGTGTTGAGAAAGGTAACCTTGTTGCTAT 328
|||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||
Sbjct 246 GTGCTTGAGAGAGCTAGCGATGATAAAAGATTGTGTGGAGAAAGGTAAACTTGTTGCTAT 305
Query 329 TCCTATCTTCTACAAGTTGGATCCATCTACTGTTAGAGGTGTTAGAGGAAAGTTCGGTGA 388
|||||||||||||||| | |||||||| |||||||||||||||||||| ||||||||||
Sbjct 306 TCCTATCTTCTACAAGGTAGATCCATCCACTGTTAGAGGTGTTAGAGGGCAGTTCGGTGA 365
Query 389 TGCTTTTAGGGATCTTGAGGAACGTGATGTG-TTGAAGAAGAAAGAGTGGAAAAAAGCTT 447
||||||||| ||||||||||||||||||||| || |||||||||||||||||| ||||||
Sbjct 366 TGCTTTTAGAGATCTTGAGGAACGTGATGTGATT-AAGAAGAAAGAGTGGAAACAAGCTT 424
Query 448 TGAAGTGGATTCCTGACTTAATTGGCATCACTGTTCATGATAAAAGTCCTGAGAGTGAAA 507
||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 425 TGAAGTGGATTCCTGGCTTAATTGGTATCACTGTTCACGATAAAAGTCCTGAGAGTGAAA 484
Query 508 TACTTAACGAAATCGTTAGGGAGGTTAAGAAAGTGTTGAAGAAAGTTCCATTGAAGGGAA 567
|||| ||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||
Sbjct 485 TACTCAACGAAATCGTTAAGGAGGTTAAGAAAGTGTTGAAGAAAGTTTCATTGGAGGGAA 544
Query 568 GCCGAAAT-T--TCTTTGTGGAACCATC 592
||| ||| | ||| |||||| |||||
Sbjct 545 GCCAAAAGGTGGTCTCTGTGGATCCATC 572
> AT5G45250.1 | Symbols: RPS4 | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:18321914-18326022 REVERSE LENGTH=3654
Length=3654
Score = 1131 bits (612), Expect = 0.0
Identities = 1243/1537 (81%), Gaps = 86/1537 (6%)
Strand=Plus/Plus
Query 643 GAACTTCGGCAGAAGGCGAAAAGGATAAGACTTTTGGAATCAAACAACAGTTGAAGGAGT 702
||||||| ||| || | ||||| || |||||||||||| | |||||| ||| || || |
Sbjct 590 GAACTTCCTCAGGAGACAAAAAGCATGAGACTTTTGGAAACGAACAACGGTTAAAAGATT 649
Query 703 TGGAAGATAAGTTGGATC-TTATTAAATACAAGGGAACTCGTGTCATTGGAGTTGTTGGG 761
||||||| |||||||||| | | ||||||||||||||||||| |||||||||||||||||
Sbjct 650 TGGAAGAGAAGTTGGATCGTGA-TAAATACAAGGGAACTCGTATCATTGGAGTTGTTGGG 708
Query 762 ATGCCGGGAATTGGTAAAACCACGCTGCTGAAAGAGCTCTATAAGACATGGAAGGGAAAG 821
||||| ||||||||||||||||| || ||||||||||| |||||||| ||| |||| |||
Sbjct 709 ATGCCCGGAATTGGTAAAACCACACTCCTGAAAGAGCTATATAAGACGTGGCAGGGCAAG 768
Query 822 TTTTCGAGGTATGCGTTAATCGATCAAATCCGTGGAAAGTCAAATAACTTCAG-GTTAGA 880
||||||||| ||||| |||||||||||||||||| |||||| || |||| | ||| ||
Sbjct 769 TTTTCGAGGCATGCGCTAATCGATCAAATCCGTGTAAAGTCCAAGCACTT-GGAGTTGGA 827
Query 881 GT-GCTTGCCTAC-ATTGCTTTTA-GAGAAATTACTACCGGAGTTGAATAATCCTCAAAT 937
| |||||||| | | |||| ||| | | | || | || |||| || ||||||| |
Sbjct 828 -TCGCTTGCCT-CAAATGCTCTTAGGCG-AGTT-GT-CC-AAGTTAAACCATCCTCACGT 881
Query 938 AGATAGTGTTGAAGAACCATACAAAACTCATAAGGGTCTGCTGCGCGAACGCAAAGTTCT 997
||| | | | |||| |||||| | || || |||| ||||||||||| ||
Sbjct 882 AGACAATCTCAAAGATCCATAC---AGTC--AA-------CTGCATGAACGCAAAGTGCT 929
Query 998 TGTCGTTCTTGATGATGTTAGTGAAAGGGAACAAATATATGCTCTTCTTGGGA-AATATG 1056
||| || ||||||||||||||| |||||||||||||| ||||||||| || || | || |
Sbjct 930 TGTTGTACTTGATGATGTTAGTAAAAGGGAACAAATAGATGCTCTTCGTGAGATACTA-G 988
Query 1057 ATCTTCAAAATAAGCATGAGTGGATCAAAGATGGCAGCAGGATTGTCATTGCGACAAACG 1116
| | | | |||| ||| || | || || || |||||| |||||||||| |||| ||
Sbjct 989 A-C-T-GGATTAAG---GAG-GG-T-AAGGAGGGAAGCAGGGTTGTCATTGCAACAAGCG 1039
Query 1117 ACAAGTCCTTATTGAAGGGTCTT-GTTCATGACACTTACGTGGTCCGACAGTTAAACCAC 1175
||| ||||||| || ||| || ||| |||| |||||| |||| | | | || ||||||
Sbjct 1040 ACATGTCCTTAACAAATGGT-TTGGTTGATGATACTTACATGGTTCAAAATTTGAACCAC 1098
Query 1176 AGAGACGGTTTACAACTTTTTCGCTATCATGCCTTTCA-TGATGATCAAGCCATTACTCC 1234
||||| | |||||||| |||| ||||||||||||| | |||||||||||||| | |||
Sbjct 1099 AGAGATAGCTTACAACTATTTCACTATCATGCCTTT-ATTGATGATCAAGCCAATCCTCA 1157
Query 1235 CAAGGTGGATTTCATGAAGCTTTCTGATGAGTTCGTGCATTATGCCAGAGGCCATCCACT 1294
||| |||||||||||||| || || | ||| || ||||| |||||||||||||||||
Sbjct 1158 AAAGAAAGATTTCATGAAGCTGTCAGAAGGGTTTGTACATTACGCCAGAGGCCATCCACT 1217
Query 1295 AGCTCTCAAAATATTGGGTAGAGAGCTTTATGAGAAAAATATGAAGCATTGGGAA-AC-A 1352
||| |||||| |||||||| |||||||| || |||||| |||| | |||| |||| | |
Sbjct 1218 AGCCCTCAAAGTATTGGGTGGAGAGCTTAATAAGAAAAGTATGGATCATT-GGAATTCGA 1276
Query 1353 AAACTGAA-AATACTCGCTCAAAGTCCCA-CCACTTATATTGGAGAG-GTCGTGCAAGTA 1409
||| |||| || ||| || || || |||| || || ||||| | || ||| | |||||
Sbjct 1277 AAA-TGAAGAA-ACTTGCACAGAGCCCCAGCC-CTAATATT-GTCAGTGTCTTCCAAGTG 1332
Query 1410 AGTTTTGATGAATTGAGTATGGCGCAGAAAGATGCATTTCTCGACATAGCCTGTTTCAGA 1469
|||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AGTTATGATGAATTGACTACAGCGCAGAAAGATGCATTTCTCGACATAGCCTGTTTCAGA 1392
Query 1470 TCGCAGGATGTGGATTATGTAGAAAGTTTACTGGTTTCGTCTGACCCCGGATCTGCTGAA 1529
|| ||||| |||||||||||||||| |||||| ||| ||||||| || || ||||||
Sbjct 1393 TCACAGGACAAGGATTATGTAGAAAGTCTACTGGCTTCATCTGACCTTGGTTCGGCTGAA 1452
Query 1530 GC-A--A-T----T-AAAGCTCTCAAGAATAAGTTCCTGATTGATACTTGTGACGGCCGT 1580
|| | | | | ||| |||||| | |||||||||||||| |||||||||| |||||
Sbjct 1453 GCAATGAGTGCAGTCAAATCTCTCACGGATAAGTTCCTGATTAATACTTGTGATGGCCGA 1512
Query 1581 GTGGAGATGCATGATCTACTGTATACATTTTCTAGGGAACTTGATCT-TAGAGCATCCAC 1639
|||||||||||||||||| | |||| |||||| |||||| ||||||| || ||||| |
Sbjct 1513 GTGGAGATGCATGATCTATTATATAAATTTTCAAGGGAAGTTGATCTGAAG-GCATCTAA 1571
Query 1640 TCAAGG-TGGTAGCAAACAACGGAGGTTGTGGCTCCAGCAAGACATAAT-TA---ATG-- 1692
|| ||| |||||||| |||||||||| |||||||||| ||| ||||||| | | |
Sbjct 1572 TC-AGGATGGTAGCAGACAACGGAGGCTGTGGCTCCATCAACACATAATCAAGGGAGGCA 1630
Query 1693 T-A-CAA--CA--G--AAA-ACAATGGGAGCTGCCGATGTCAGAGGTATTTTCCTAGATT 1743
| | ||| | | ||| | |||| ||||||| |||| ||||||||||||||||| |
Sbjct 1631 TAATCAATGTATTGCAAAATAAAATGAAAGCTGCCAATGTTAGAGGTATTTTCCTAGACT 1690
Query 1744 TGTCTGAAGT-GAAGGGTGAAACAAGCTTAGATCGTGGA-CACTTGAAAAAGATGTGCAA 1801
|||||||||| ||| | ||||| |||||||| || || ||||| | ||| ||| | ||
Sbjct 1691 TGTCTGAAGTGGAA-GACGAAACGAGCTTAGACCG-CGACCACTTCATAAATATGGGAAA 1748
Query 1802 TCTCCGGTATCTCAAATTCTACAATTCTCATTGTCCTCATGAATGTAAAACCAACCATAA 1861
||||||||||||||| ||||||||||| |||||||| || ||||||||||||||| ||||
Sbjct 1749 TCTCCGGTATCTCAAGTTCTACAATTCCCATTGTCCACAGGAATGTAAAACCAACAATAA 1808
Query 1862 GATAAACATGCCTGATGGACTGGAGCTACCATTGAAAGAGGTCCGATGCCTTCACTGGCT 1921
|| ||||| |||||| ||| |||||||||||||||| || |||||||| ||||||||
Sbjct 1809 AATCAACATCCCTGATAAACTTAAGCTACCATTGAAAGAAGTTCGATGCCTCCACTGGCT 1868
Query 1922 GAAATTCCCATTGGAGGA-ACTTCCAAACGATTTTGACCCGATTAATCTCGTCGACCTTA 1980
||||||||||||||| || ||||||||||||||| |||| |||||||| ||||||||||
Sbjct 1869 GAAATTCCCATTGGA-GACACTTCCAAACGATTTCAACCCAATTAATCTTGTCGACCTTA 1927
Query 1981 AGCTGCCATACAGTGAGATTGAACGACTTTGGGAGGGTGTTAAGGATACGCC-TGTCTTA 2039
||||||| |||||||| || |||| |||||||||||||| ||||| || || || ||||
Sbjct 1928 AGCTGCCCTACAGTGAAATGGAACAACTTTGGGAGGGTGACAAGGACACACCATG-CTTA 1986
Query 2040 AAATGGGTTGATCTCAATCACTCAAGTAAGTTGTGCAGCTTGTCAGGATTATCAAAGGCT 2099
| ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 1987 AGGTGGGTCGATCTCAATCACTCAAGTAAGTTGTGCAGCTTGTCAGGGTTATCAAAAGCT 2046
Query 2100 CAAAATCTTCAAAGACTGAACCTTGAAGGGTGCACAA 2136
|||| |||||||| ||||||||||||| |||||||
Sbjct 2047 GAAAAGCTTCAAAGGTTGAACCTTGAAGGTTGCACAA 2083
Score = 628 bits (340), Expect = 8e-179
Identities = 647/794 (81%), Gaps = 25/794 (3%)
Strand=Plus/Plus
Query 2562 CTTACAT-ATGTTCCAGAATTGCCACCAACCCTCCAGTACTTAGATGCACACGGCTGTAG 2620
||||||| | |||||||| || ||||||| || |||| |||||||||||||||||||||
Sbjct 2623 CTTACATCA-GTTCCAGAGTTTCCACCAAATCTTCAGTGCTTAGATGCACACGGCTGTAG 2681
Query 2621 CTCACTGAAGA-ATGTTGCAACA-CCACTGGCCCGTATCGTGTCAACCGTGCAGAACCAT 2678
|| ||||||| | ||| ||| | || ||||||||||| || |||| | ||||| |||
Sbjct 2682 TTCGCTGAAGACA-GTTTCAA-AGCCTTTGGCCCGTATCATGCCAACTGAACAGAATCAT 2739
Query 2679 TGCACTTTCAACTTCACCAACTGTG-GTAACCTGGAGCAAGCTGCAAAGGAGGAAATCAC 2737
| ||| |||| ||||||||||||| | |||||||| |||||||||||||||||||||||
Sbjct 2740 TCCACATTCATTTTCACCAACTGTGAG-AACCTGGAACAAGCTGCAAAGGAGGAAATCAC 2798
Query 2738 ATCATATGCTCAAAGGAAATGCCAGTTACTT-CCAGATGCTCGTAAACATTACAACGAGG 2796
||| ||||||||||||||||||||| | || || ||||||| |||| ||||| | ||
Sbjct 2799 ATCGTATGCTCAAAGGAAATGCCAGCT-GTTATCATATGCTCGGAAACGCTACAATGGGG 2857
Query 2797 GTCTTAACTCAGAGGCTTTGTTCAGCACTTGTTTTCCTGGATGTGAAGTGCCTTCATGGT 2856
||||| ||||| |||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 2858 GTCTTGTTTCAGAATCTTTGTTCAGCACTTGCTTTCCTGGATGTGAAGTGCCTTCTTGGT 2917
Query 2857 TTGGGCATGAAGTTGTTGGGTCTCTGTT-GCAACG-AAAACTCCTCCCACATTGGCATGA 2914
|| | |||||| ||||| ||| ||| | || | ||||||||||||||||||||||||
Sbjct 2918 TTTGTCATGAAACAGTTGGATCTGAGTTAG-AA-GTAAAACTCCTCCCACATTGGCATGA 2975
Query 2915 CAAGAGGCTTTCTGGAATAGCTCTATGTGCTGTAGTCTCATTTCTTGACAACCAAGATCA 2974
||||| |||| | || || |||||||||||||||||||||| ||||||| |||||||||
Sbjct 2976 CAAGAAGCTTGCCGGGATTGCTCTATGTGCTGTAGTCTCATGTCTTGACCCCCAAGATCA 3035
Query 2975 AATCAGCTGCTTCTCGGTGACATGTACCTTTAAAATAAAAGCTGAAGACAAGTCTTGGGT 3034
| ||||| |||| || ||||| || ||||||||| |||||| ||||||||||||||||||
Sbjct 3036 AGTCAGCCGCTTGTCAGTGACCTGCACCTTTAAAGTAAAAGATGAAGACAAGTCTTGGGT 3095
Query 3035 CCCCTTTACTTGCCCAGTAGGAATTTGGACTAGAGAGGGAGACCAGAAAGACAAGATTGA 3094
| | | |||||| |||||||||| |||||| ||| | |||| | |||||| ||||||||
Sbjct 3096 CGCATATACTTGTCCAGTAGGAAGTTGGACCAGACATGGAGGCGGGAAAGATAAGATTGA 3155
Query 3095 G-TCAGATCATGTTTTTATAGCCTACATTAGTTGCCCACATTCAATAAGGTGTC-TCGAA 3152
| | ||| ||||| || || | |||| |||||||||||| | |||| |||| | |||
Sbjct 3156 GCT-AGACCATGTCTTCATTGGATACACCAGTTGCCCACATACTATAAAATGTCAT-GAA 3213
Query 3153 GACGAG-AATTCTGATAAATGCAATTTTACGGAAGCCTCCCTTGAGTTTACGGTGACAAG 3211
|| | | || || ||| |||||||| ||| |||||||| ||| | ||||| |||||| |
Sbjct 3214 GAAG-GTAACTCAGATGAATGCAATCCTACCGAAGCCTCTCTTAAATTTACTGTGACAGG 3272
Query 3212 TGGTACAAGTG-GTGTAGGAGTATTCAAGGTGTTGAAGTGCGGATTGAGTTTGGTGTATG 3270
|||||||||| | | ||| || ||||||||||||||| || || |||||||||||||
Sbjct 3273 AGGTACAAGTGAGAAT-GGAAAATACAAGGTGTTGAAGTGTGGTTTAAGTTTGGTGTATG 3331
Query 3271 AAAATGATAAAAACAAAAACAGTTCTCTTGAGGCAAAGTATGAGGTTCCTATTG-AAGTG 3329
|| |||||| ||||||| ||| ||||||| ||||||| || | | ||||| || |
Sbjct 3332 CTAAGGATAAAGACAAAAATAGTGCTCTTGAAACAAAGTACGATATGCTTATTGGAAA-G 3390
Query 3330 AGCTTTCAA-AAAC 3342
||||||||| ||||
Sbjct 3391 AGCTTTCAAGAAAC 3404
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 175985636044
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5