BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg948569
Length=1886
Score E
Sequences producing significant alignments: (Bits) Value
AT5G45030.1 | Symbols: | Trypsin family protein | chr5:1817247... 2959 0.0
AT2G35155.1 | Symbols: | Trypsin family protein | chr2:1481899... 675 0.0
> AT5G45030.1 | Symbols: | Trypsin family protein | chr5:18172471-18176207
FORWARD LENGTH=2816
Length=2816
Score = 2959 bits (1602), Expect = 0.0
Identities = 1792/1884 (95%), Gaps = 12/1884 (1%)
Strand=Plus/Plus
Query 7 TAGTAGAA-G-TAAAGATGGAAGGGAAA-AGATTGGATCTTAGGTTTCATCACTCTGTAT 63
|||||||| | ||||||||||| ||||| |||||||||||||| ||||||||||| |
Sbjct 122 TAGTAGAAGGTTAAAGATGGAA-GGAAAGAGATTGGATCTTAGATTTCATCACTC----T 176
Query 64 CATCATCATCACAATCTGTGGAATCTGCTGCATTGGATTTGGATAAAAACGGCTACAATC 123
| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 177 -A-CATCATCACAATCTGTGGAATCTGCTGCATTGGATTTGGATAAAAATGTTTACAATC 234
Query 124 ATATTAAATTGGCTTCTTCATCGCCGTTTCAACCGTTTCCATCAGGCGGTCAGCATCCTG 183
||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 235 ATATTAAATTGGCGTCTTCATCGCCGCTTCAACCGTTTCCATCAGGCGCTCAGCATCCTG 294
Query 184 AAACTAGTGCTGCTGCTGCTTACTTCTCTTGGCCTACTTCGTGTCGATTGAACGATTCAG 243
|||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||
Sbjct 295 AAACTAGTGCTGCTGCTGCTTACTTCTCTTGGCCTACTTCAAGTAGATTGAATGATTCAG 354
Query 244 CAGAAGACAGAGCAAACTATTTTGCAAATCTTCAGAAAGGTGTTTTGCCTGAAACTTTTG 303
| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct 355 CGGAAGACAGAGCAAACTATTTTGCAAATCTTCAAAAAGGTGTTTTGCCTGAAAGTTTTG 414
Query 304 ATGGTTTACCTACAGGGAAGAAAGCTACTACGTTGCTTGAATTGATGATGATTAGAGCTT 363
||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 415 ATGGTTTACCTACTGGGAAGAAAGCTACTACATTGCTTGAGTTGATGATGATTAGAGCTT 474
Query 364 TTCATAGTAAGAATTTAAGGAGGTTTAGTCTCGGTACAGCTATTGGATTTCGGATTAGAC 423
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct 475 TTCATAGTAAGAATTTAAGGAGGTTTAGTCTCGGTACGGCTATTGGATTTCGGATTCGAC 534
Query 424 GAGGCGTTTTGACAAATATAGCGGCTATTCTTGTTTTTGTTGCTCGGAAAGTTCACAAGC 483
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 535 GAGGTGTTTTGACAAATATAGCGGCTATTCTTGTTTTTGTTGCTCGGAAAGTTCACAAGC 594
Query 484 AATGGCTTAATCCTCTTCAGTGTTTACCTACAGCCTTGGAGGGTCCTGGAGGAGTTTGGT 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 595 AATGGCTTAATCCTCTTCAGTGTTTACCTACAGCCTTGGAGGGTCCTGGAGGAGTTTGGT 654
Query 544 GTGATGTAGATGTTGTTGAGTTTCAATATTATGGTGCACCTGCGCAAACGCCCAAAGAGC 603
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 655 GTGATGTAGATGTTGTTGAGTTTCAATATTATGGTGCACCTGCGCAAACACCTAAAGAGC 714
Query 604 AGGTGTATACAGAGCTTGTTGATGATCTGAGAGGCAGTGGTTCGTCCATCGGATCTGGTT 663
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 715 AGGTGTATACAGAGCTTGTTGATGATCTGAGAGGCAGTGGTTCGTCCATAGGATCTGGTT 774
Query 664 CACAGGTGGCTAGCCAAGAGACATATGGAACCTTGGGAGCTATTGTAAAGAGTAAAACCG 723
|||||||||||||||||||||||||||||||||| || || ||||||||||||||||| |
Sbjct 775 CACAGGTGGCTAGCCAAGAGACATATGGAACCTTAGGTGCAATTGTAAAGAGTAAAACTG 834
Query 724 GAATCAGACAAGTTGGCTTCCTTACAAACCGTCATGTTGCAGTTGATTTAGACTACCCAA 783
| |||||||| ||||| ||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 835 GTATCAGACAGGTTGGTTTCCTAACAAACCGGCATGTTGCAGTTGATTTAGACTACCCAA 894
Query 784 GCCAGAAGATGTTTCATCCTTTGCCACCTAGCCTCGGACCCGGAGTCTACTTAGGTGCAG 843
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 895 GCCAGAAGATGTTTCATCCATTGCCACCTAGCCTCGGACCCGGAGTCTACTTAGGTGCAG 954
Query 844 TGGAAAGAGCAACTTCATTCATTACCGATGACCTTTGGTATGGCATTTTCGCTGGAACTA 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 955 TGGAAAGAGCAACTTCATTCATTACCGATGACCTTTGGTATGGCATTTTCGCTGGAACTA 1014
Query 904 ACCCAGAAACATTTGTTCGAGCTGATGGAGCCTTCATACCATTTGCGGAGGACTTCAACA 963
||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |
Sbjct 1015 ACCCAGAAACATTTGTTCGAGCTGATGGAGCCTTCATTCCATTTGCCGAGGACTTCAATA 1074
Query 964 TGAATAATGTAACCACAACTGTCAAAGGTATTGGTGAGATCGGTAATATCCATGCTACTG 1023
||| ||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||
Sbjct 1075 CGAACAATGTAACCACAACTGTCAAAGGGATTGGTGAGATTGGTGATATCCATGCTACTG 1134
Query 1024 ATCTACAGTCACCAATCAACAGTCTAATAGGAAGGAAAGTTGTCAAAGTTGGAAGAAGCT 1083
|||||||||| ||| | ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1135 ATCTACAGTCTCCAGTTAACAGTCTAATAGGAAGAAAAGTTGTCAAAGTTGGAAGAAGCT 1194
Query 1084 CTGGTTTGACCACTGGGACCATAATGGCATATGCGTTGGAATACAATGACGAGAAAGGGA 1143
| |||||||||||||||||||||||||| || |||||||||||||||||||||||||| |
Sbjct 1195 CGGGTTTGACCACTGGGACCATAATGGCTTACGCGTTGGAATACAATGACGAGAAAGGAA 1254
Query 1144 TTTGTTTCCTAACTGATTTTCTTGTTGTTGGTGAAAACCAGCAGACTTTTGATCTTGAGG 1203
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1255 TTTGTTTCCTAACCGATTTTCTTGTTGTTGGTGAAAACCAGCAGACTTTTGATCTTGAGG 1314
Query 1204 GTGACAGTGGAAGCCTTATTCTGTTGGCTGCGGGCGATGAGAAGAATGAGAAACCGCGAC 1263
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1315 GTGATAGTGGAAGCCTTATTCTGTTGGCTGCGGGCGATGAGAAGAACGAGAAACCGCGAC 1374
Query 1264 CTGTTGGAATTATTTGGGGAGGAACAGCAAACAGGGGACGGTTGAAGCTAAAAGTGGGGG 1323
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1375 CTGTTGGAATCATATGGGGAGGAACAGCAAACAGGGGACGGTTGAAGCTAAAAGTGGGGG 1434
Query 1324 AACAACCTGAGAATTGGACAAGTGGAGTTGATCTTGGAAGAGTTCTTAATCTTCTTGAGC 1383
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1435 AACAACCTGAGAATTGGACAAGTGGAGTTGATCTTGGCAGAGTTCTTAATCTTCTTGAGC 1494
Query 1384 TTGATCTCATTACTTCCAATGAGGGTCTTCAAGCGGCGGTGCTGGAACAGAGAAACGGTA 1443
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1495 TTGATCTCATTACTTCCAATGAGGGTCTTCAAGCTGCGGTGCTGGAACAGAGAAACGGTA 1554
Query 1444 TTATGTGTGCTG-GAATTGATTCCACCGTTGTGGAATCATCTCCTGGTGTGTGCAATATT 1502
|||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1555 TTATGTGTGCTGCGG-TTGATTCCACCGTCGTGGAATCATCTCCTGGTGTGTGCAATATT 1613
Query 1503 TCGAGGTGTAAAACGGGTGAGAACTTTGAGCCTATTAACTTGAATGTCCAGCAAGTTCTT 1562
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1614 TCCAGGTGTAAAACGGGTGAGAACTTTGAGCCTATTAACTTGAATGTCCAGCAAGTTCTT 1673
Query 1563 AGAGAAGAAGACAGCTCAAACATTCATCCAGAGTTCCAAATAGAAGATGTGTTAGAATCA 1622
| |||||| |||| |||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct 1674 ATAGAAGACGACAACTCAAACATTCACCCAGAGTTCCAAATAGAAGACGTGTTAGAATCA 1733
Query 1623 GCAGCTATGATCGAAGAACACCAGTTCATTCCAAGTTCAAGTAACAACGGATACTCACTC 1682
| ||| |||||||||||||||||||||||||||||||||| |||||||||| | ||||
Sbjct 1734 GTGGCTGTGATCGAAGAACACCAGTTCATTCCAAGTTCAAGCAACAACGGATCCGCACTT 1793
Query 1683 CATCAGAAAATTAATGGACCAGAGAATCTCGAATCCAAGAACCTGTCTTCTCTTAAGACT 1742
||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1794 CATCAGAAACCTAATGGACCAGAGAATCTCGAATCCAAGAACCTGTCTTCGCTTAAGACT 1853
Query 1743 AATAGCTCGGGTGATGAGATTGGCTTTTCTTTGCAGTTAGGTGAGTCAGATACAAAGAAA 1802
| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1854 AGTAGCTCAGGTGATGAGATAGGCTTTTCTTTGCAGTTAGGTGAGTCAGATACAAAGAAA 1913
Query 1803 AGAAAGCGAACTGATTCACCAGATGGTTCTCAAGAACATGAAGAGTCAAGGTTATGCTCA 1862
|||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||
Sbjct 1914 AGAAAGCGAACTGATTCACCAGATGGTTCTCAAGAAGATGAAGAGTGAGGGTTATGCTCA 1973
Query 1863 TGAGACTTCATAACATACCAGAGG 1886
||||||||||||||||||||||||
Sbjct 1974 TGAGACTTCATAACATACCAGAGG 1997
> AT2G35155.1 | Symbols: | Trypsin family protein | chr2:14818994-14821965
REVERSE LENGTH=2263
Length=2263
Score = 675 bits (365), Expect = 0.0
Identities = 919/1182 (78%), Gaps = 56/1182 (5%)
Strand=Plus/Plus
Query 246 GAAGACAGAGCAAACTATTTTGCAAATCTTCAGAAAGGTGTTTTGCCTGAAACT-TTTG- 303
|||||| |||| ||||| |||| ||||| |||||||| ||||| || |||||| || |
Sbjct 534 GAAGACCGAGCTAACTACTTTGGTAATCTCCAGAAAGGGGTTTTACCAGAAACTGTTGGC 593
Query 304 ATGGTTTACCTA-CAGGGA-AGA-AAGCTACTACGTTGCTTGAATTGATGATGATTAGAG 360
| || || || | || ||| | | |||| ||||| |||||||| | |||| || ||||
Sbjct 594 A-GG-TTGCC-ATCA-GGACA-ACAAGCCACTACTTTGCTTGAGCTCATGACCATCAGAG 648
Query 361 CTTTTCATAGTAAGAAT-TTAAGGAGGTTTAGTCTCGGTACAGCTATTGGATTTCGGATT 419
| ||||||||||| ||| | | | || || || ||||| || |||| ||||||||
Sbjct 649 CGTTTCATAGTAA-AATCCTGCGCCGCTTCAGCCTTGGTACTGCGGTTGGGTTTCGGATC 707
Query 420 AGACGAGGCGTTTTGACAAATATAGCGGCTATTCTTGTTTTTGTTGCTCGGAAAGTTCAC 479
|| || || ||| | || ||| | | || || ||||| ||||||||| ||||||| ||
Sbjct 708 AGCCGTGGTGTTCTAACGAATGTTCCAGCGATACTTGTCTTTGTTGCTAGGAAAGTCCAT 767
Query 480 AAGCAATGGCTTAATCCTCTTCAGTG-TTTACCTACAG-CCTTGGAGGGTCCTGGAGGAG 537
| ||||||||| ||||| | ||||| || ||| | | |||| |||||||||||||| |
Sbjct 768 AGGCAATGGCTAAATCCAATGCAGTGCCTT-CCTTCTGCCCTT-GAGGGTCCTGGAGGGG 825
Query 538 TTTGGTGTGATGTAGATGTTGTTGAGTTTCAATATTATGGTGCACCTGC-GCAAACGCCC 596
| ||||| |||||||||||||| || || ||||| || ||||| ||||| || ||| ||
Sbjct 826 TATGGTGCGATGTAGATGTTGTGGAATTCCAATACTACGGTGCTCCTGCTGC-AAC-ACC 883
Query 597 AAA-GAGCAGGTGTATACA-GAGCTTGTTGATGATCTGAGAGGCAGTGGTTCGTCCATCG 654
||| || || || |||| | || ||||| |||| | ||||||| |||| | | | ||| |
Sbjct 884 AAAGGAACAAGTTTATA-ATGAACTTGTAGATGGTTTGAGAGGAAGTGATCCCTGCATTG 942
Query 655 GATCTGGTTCACAGGTGGCTAGCCAAGAGACATATGGAACCTTGGGAGCTATTGT-AAAG 713
| |||||||| ||||| || |||||||| ||||||||||||||||||||||| || |||
Sbjct 943 GCTCTGGTTCTCAGGTTGCAAGCCAAGAAACATATGGAACCTTGGGAGCTATAGTGAAA- 1001
Query 714 AGTAAAACCGG-AATCAGACAAGTTGGCTTCCTTACAAACCGTCATGTTGCAGTTGATTT 772
|| | ||| || || || || ||||| |||||||| || || ||||| |||||||||||
Sbjct 1002 AGCAGAACAGGTAACCA-CCAGGTTGGTTTCCTTACCAATCGGCATGTCGCAGTTGATTT 1060
Query 773 AGACTACCCAAGCCAGAAGATGTTTCATCCTTTGCCACCTAGCCTCGGACCCGGAGTCTA 832
|| || ||||||||||| |||||||||||||| || || ||||| ||||| || |||||
Sbjct 1061 GGATTATCCAAGCCAGAAAATGTTTCATCCTTTACCTCCAAGCCTTGGACCGGGTGTCTA 1120
Query 833 CTTAGGTGCAGTGGAAAGAGCAACTTCATTCATTACCGATGACCTTTGGTATGGCAT-TT 891
| | |||||||| || |||||||| || || || || ||||| | ||||||||||| ||
Sbjct 1121 CCTCGGTGCAGTTGAGAGAGCAACATCGTTTATCACAGATGATCAGTGGTATGGCATATT 1180
Query 892 TCGCTGGAACTAACCCAGAAACATTTGTTCGAGCTGATGGAGCCTTCATACCATTTGCGG 951
| ||||| || || |||||||| ||||| |||| ||||| ||||| || || ||||| |
Sbjct 1181 T-GCTGGCACAAATCCAGAAACGTTTGTGAGAGCGGATGGTGCCTTTATTCCTTTTGCAG 1239
Query 952 AGGACTTCAACATGAATAATGTAACCACAACTG-TCAAA-GGTATTGGTGAGATCGGTA- 1008
| || ||||||| || |||||||| || || | ||| || ||||||||||| || |
Sbjct 1240 AAGATTTCAACACGAGCAATGTAACTAC-GTTGAT-AAAGGGCATTGGTGAGATAGG-AG 1296
Query 1009 ATATCCATGCTACT-GATC-TACAGTCACCAATCAACAGTC-TAATAGGAAGGA-AAGTT 1064
|| | || | || | || | | || || ||||| | || | || | |||| | |||||
Sbjct 1297 ATGTGCACGTTA-TAGA-CTTGCAATCCCCAATTGATAGCCTTATTGGGAA--ACAAGTT 1352
Query 1065 GTCAAAGTTGGAAGAAGCTCTGGTT-TGACCACTGGGACCATAATGGCATATGCGTTGGA 1123
||||||||||||||||||||||| | | ||||| || ||||||||||| ||||| |||||
Sbjct 1353 GTCAAAGTTGGAAGAAGCTCTGGATAT-ACCACCGGAACCATAATGGCTTATGCATTGGA 1411
Query 1124 ATACAATGACGAGAAAGGGATTTGTTTCCTAACTGATTTTCTTGTTGTTGGTGAAAACCA 1183
|||||| |||||||||||||| |||||||| || |||||||| || |||||||||||||
Sbjct 1412 ATACAACGACGAGAAAGGGATCTGTTTCCTCACGGATTTTCTGGTCATTGGTGAAAACCA 1471
Query 1184 GCAGACTTTTGATCTTGAGGGTGACAGTGGAAGCCTTATTCTGTTGGCTGCGGGCGATGA 1243
||| |||||||| ||||| ||||||||||||||||| || || || | | || | | |
Sbjct 1472 GCAAACTTTTGACCTTGAAGGTGACAGTGGAAGCCTAATACTCTTAAC-G-GGTCCA--A 1527
Query 1244 GAAGAATGAGAAACCGCGACCTGTTGGAATTATTTGGGGAGGAACAGCAAACAGGGGACG 1303
| | | |||| || ||||| ||||| || ||||||||||||||||| ||| | ||| |
Sbjct 1528 -ATGG-TCAGAAGCCACGACCAGTTGGGATCATTTGGGGAGGAACAGCCAACCGAGGAAG 1585
Query 1304 G-TTGAAGCTAAAAGTGGGGGAACAACCTGAGAATTGGACAAGTGGAGTTGATCTTGGAA 1362
|| || |||| || || || |||| ||||| |||||||| ||||||||||||||
Sbjct 1586 ACTTAAA-CTAATAGCCGGTCAAGAACCCGAGAACTGGACAAGCGGAGTTGATCTTGGTC 1644
Query 1363 GAGTTCTTA-ATCTTCTTG-AGCTTGATCTCATTACTTCCAA 1402
| || || |||| |||| ||||||||||||| || |||||
Sbjct 1645 GCCTT-TTGGATCT-CTTGGAGCTTGATCTCATCACATCCAA 1684
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 93373013700
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5