BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg948663
Length=3574
Score E
Sequences producing significant alignments: (Bits) Value
AT5G44510.1 | Symbols: TAO1 | target of AVRB operation1 | chr5:... 4488 0.0
AT5G11250.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 959 0.0
AT3G04220.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 531 2e-149
AT3G44410.1 | Symbols: | pseudogene, disease resistence protei... 130 1e-28
> AT5G44510.1 | Symbols: TAO1 | target of AVRB operation1 | chr5:17929673-17934188
REVERSE LENGTH=3564
Length=3564
Score = 4488 bits (2430), Expect = 0.0
Identities = 2738/2889 (95%), Gaps = 12/2889 (0%)
Strand=Plus/Plus
Query 21 ATGGATTCTTCATGTTTCTTGGTTTATAGAATATTCAGATTTCGTAAAAGAAATAAAAAT 80
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1 ATGGATTCTTCATGTTTCTTGGTTTATAGAATATTCAGATTTCGTAAAAGAAATAAGAAT 60
Query 81 ATTCCTTCTTCTCTATCTCCTTCATCTCCCCCTTCTTCTTTGTCTCAAAATTGGTTGCAC 140
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 61 ATTTCTTCTTCTCTATCTTCTTCATCTCCCCCTTCTTCTTTGTCTCAAAATTGGTTGCAC 120
Query 141 CCTGTCTTCTTGAGTTTCCGTGGGGAAGATGTCCGCAAAGGCTTTCTCAGTCACATTCAG 200
||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 121 CCTGTTTTCTTGAGCTTCCGTGGGGAAGATGTCCGCAAAGGCTTGCTCAGTCACATTCAG 180
Query 201 AAGGAGTTTCAAAGAAAGGGTATCACACCATTCATTGATAATGAGATGAAGAGAGGAGGA 260
||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct 181 AAGGAGTTTCAAAGAAACGGAATCACACCGTTCATTGATAATGAGATGAAGAGAGGAGGA 240
Query 261 TCCATTGGTCCTGAGCTCTTACAGGCAATTCGAGGATCTAAGATCGCGATCATCTTGCTC 320
|||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct 241 TCCATTGGTCCTGAGCTCTTACAGGCTATTAGAGGATCTAAGATCGCGATCATCTTGCTT 300
Query 321 TCGAGGAACTATGGTTCTTCGAAGTGGTGTCTTGATGAATTGGTGGAGATTATGAAATGC 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 TCGAGGAACTATGGTTCTTCGAAGTGGTGTCTTGATGAATTGGTGGAGATTATGAAATGC 360
Query 381 AGAGAAGAGTTGGGTCAAACAGTGATGACCGTTTTTTATGATGTGGATCCATCTGATGTG 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 AGAGAAGAGTTGGGTCAAACAGTGATGACCGTTTTTTATGATGTGGATCCATCTGATGTG 420
Query 441 AGGAAGCAGAAGGGAGATTTTGGGAAGGTTTTTAGAAAAACTTGTGTTGGAAGACCAGAG 500
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 421 AGGAAGCAGAAGGGAGATTTTGGGAAGGTTTTTAAAAAAACTTGTGTTGGAAGACCAGAG 480
Query 501 GAGGTGA-AGCAGAAATGGAAGCAAGCTTTGACCAGTGCTGCAAATATACTCGGGGAGGA 559
||| || | |||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 481 GAGATGGTA-CAGAGATGGAAGCAAGCTTTGACCAGCGCTGCAAATATACTCGGGGAGGA 539
Query 560 TTCTCGCAACTGGGAAAATGAAGCAGATATGATCATTAAAATAGCAAAAGATGTCTCCGA 619
|||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||
Sbjct 540 TTCTCGCAACTGGGAAAACGAAGCGGATATGATCATTAAAATCTCAAAAGATGTCTCCGA 599
Query 620 TGTGTTGAGTTTTACACCATCAAAGGATTTTGATGAGTTTGTTGGCATTGAAGCTCATAC 679
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 TGTGTTGAGTTTTACGCCATCAAAGGATTTTGATGAGTTTGTTGGCATTGAAGCTCATAC 659
Query 680 GACAGAGATAACTTCGTTGTTACAACTTGATCTGGAAGAAGTGAGAATGATAGGGATTTG 739
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 GACGGAGATAACTTCGTTGTTACAACTTGATCTGGAAGAAGTGAGAATGATAGGGATTTG 719
Query 740 GGGTCCTGCTGGAATTGGCAAGACTACCATCTCCAGGGTTCTATATAACAAACTCTTCCA 799
|||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||
Sbjct 720 GGGTCCTGCTGGTATTGGCAAGACGACCATCTCCAGAGTTCTATATAACAAACTCTTTCA 779
Query 800 TCAATTCCAACTGGGCGCAATCATTGACAACATTAAAGTACGTTATCCAAGACCTTGTCA 859
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 780 TCAGTTCCAACTGGGCGCAATCATTGACAACATCAAAGTACGTTATCCAAGACCTTGTCA 839
Query 860 CGATGAGTACAGCGCAAAACTGCAATTACAGAAAGAATTGTTGTCTCAGATGATTAACCA 919
|||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 840 CGATGAGTACAGTGCAAAGCTGCAGTTACAGAAAGAATTGTTGTCTCAGATGATTAACCA 899
Query 920 GAAAGATATGGTGGTTCCTCATTTAGGGGTTGCCCAAGAGAGGTTGAAGGACAGGAAAGT 979
||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct 900 GAAAGATATGGTGGTTCCTCATTTAGGTGTTGCCCAAGAGAGGTTGAAGGACAAGAAAGT 959
Query 980 TCTTCTAGTTCTTGATGACGTCGATGCGCTAGTACAACTTGATGCCATGGCGAAAGATGT 1039
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 960 TCTTCTAGTTCTTGATGACGTCGATGGGTTAGTACAACTTGATGCCATGGCGAAAGATGT 1019
Query 1040 ACGATGGTTTGGCCTTGGAAGTCGCATTATCGTCGTAACACAAGATCTAAAACTTTTAAA 1099
|| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 1020 ACAATGGTTTGGCCTTGGAAGTCGCATTATTGTCGTAACTCAAGATCTAAAACTTTTAAA 1079
Query 1100 AGCTCATGGGATCAAGTATATTTACAAGGTTGATTTTCCAACTTCTGATGAGGCTCTAGA 1159
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 1080 AGCTCATGGGATCAAGTATATTTACAAAGTTGATTTTCCAACTTCTGATGAGGCTCTTGA 1139
Query 1160 AATATTCTGCATGTATGCTTTTGGTCAGAAGTCCCCTAAAGTTGGTTTTGAGCAGATTGC 1219
||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1140 AATCTTCTGCATGTATGCTTTTGGTGAGAAGTCCCCTAAAGTTGGTTTTGAGCAGATTGC 1199
Query 1220 TCGGACGGTTACAACACTTGCTGGTAAACTCCCGTTAGGACTAAGGGTTATGGGATCCTA 1279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1200 TCGGACGGTTACAACACTTGCTGGTAAACTCCCGTTAGGACTAAGGGTTATGGGATCATA 1259
Query 1280 TTTACGGCGAATGTCGAAGCAGGAGTGGGCGAGATCAATACCAAGGTTAAGAACCAGCCT 1339
|||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||
Sbjct 1260 TTTACGGCGAATGTCGAAGCAGGAGTGGGCGAAATCAATACCAAGGCTAAGGACCAGCCT 1319
Query 1340 TGACGATGATATTGAGAGCGTTTTGAAGTTCAGTTACAACTCCTTAGCTGCAGAAGAAAA 1399
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||
Sbjct 1320 TGACGATGATATTGAGAGCGTTTTGAAGTTCAGTTACAACTCCTTAGCTGAACAAGAGAA 1379
Query 1400 AGATTTATTTCTTCACATAGCCTGtttttttAGAAGGGAAAGGATTGAGACTTTGGAAGT 1459
||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||
Sbjct 1380 AGATTTATTTCTTCACATAACCTGTTTTTTCAGAAGGGAAAGGATTGAGACATTGGAAGT 1439
Query 1460 GTTTCTTGCAAAGAAGTTTGTGGATGTGAGGCAAGGGCTCCAAATCTTAGCCGATAAATC 1519
|||||||||||||||| ||| ||| |||||||||||||||||||||| || ||||||||
Sbjct 1440 ATTTCTTGCAAAGAAGTCTGTAGATATGAGGCAAGGGCTCCAAATCTTGGCAGATAAATC 1499
Query 1520 TCTCTTGTCTATGAACTTGGGAAATATAGAGATGCATAATTTGCTAGTACAACTAGGTCT 1579
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1500 TCTCTTATCTTTGAACTTGGGAAATATAGAGATGCATAATTTGCTAGTACAACTAGGCCT 1559
Query 1580 AGACATTATTCGTAAACAATCCATTCATAAGCCTGGGAAACGTCAGTTTTTGGTTGATGC 1639
||||||| ||||||| ||||| |||||||||||||||||||||||||| ||||||||| |
Sbjct 1560 AGACATTGTTCGTAAGCAATCTATTCATAAGCCTGGGAAACGTCAGTTCTTGGTTGATAC 1619
Query 1640 TGAAGATATTTGTGAAGTACTCACCGATGATACAGGTACCAGAACTCTTGTAGGCATTGA 1699
|||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||| ||
Sbjct 1620 TGAAGATATTTGTGAAGTACTCACTGATGATACGGGTACCAGAACTCTTATAGGCATAGA 1679
Query 1700 TCTCGAGTTATCTGGTGTAATCGAGGGTGTGATAAATATAAGTGAAAGAGCCTTTGAAAG 1759
||| ||||||||||||||||||||||| || |||||||| ||||||||||||||||||||
Sbjct 1680 TCTTGAGTTATCTGGTGTAATCGAGGGCGTAATAAATATTAGTGAAAGAGCCTTTGAAAG 1739
Query 1760 AATGTGCAATCTCCAGTTCTTAAGATTCCACCACCCATATGGTGATCGTTGTCACGACAT 1819
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1740 AATGTGCAATCTCCAGTTCTTAAGATTCCACCATCCATATGGTGATCGTTGTCACGACAT 1799
Query 1820 ATTGTACTTACCGCAAGGTTTGAGCCATATATCTCGAAAACTTAGATTACTACATTGGGA 1879
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct 1800 ATTGTACTTACCGCAAGGTTTGAGCCATATATCTCGAAAACTTAGACTACTTCATTGGGA 1859
Query 1880 ACGTTATCCACTGACATGTTTGCCTTCCAAGTTTAATCCTGAGTTCCTTGTCAAAATAAA 1939
||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct 1860 ACGTTATCCACTGACATGTTTGCCTCCCAAGTTTAATCCGGAGTTCCTTGTCAAAATAAA 1919
Query 1940 CATGCGAGACAGCATGCTTGAGAAGCTGTGGGAAGGAAATGAACCCATTAGAAATCTCAA 1999
|||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||
Sbjct 1920 CATGCGAGACAGCATGCTCGAGAAGCTGTGGGACGGAAATGAACCCATTAGAAACCTCAA 1979
Query 2000 ATGGATGGATTTGAGTTCTTGTGTAAACCTGAAGGAGCTGCCTGATTTCTCTACTGCCAC 2059
||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1980 ATGGATGGATTTGAGTTTTTGTGTAAACCTGAAGGAGCTTCCTGATTTCTCTACTGCCAC 2039
Query 2060 TAATCTCCAAGAATTGAGACTCATAGATTGTTTAAGCTTGGTGGAGCTCCCCTCTTCCAT 2119
||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct 2040 TAATCTCCAAGAATTGAGACTCATAAATTGTTTAAGCTTGGTGGAGCTTCCCTCTTCCAT 2099
Query 2120 CGGGAATGTCACTAATTTACTGGAATTGGATCTTATTGGTTGCTCTAGTCTGGTGAAACT 2179
||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct 2100 TGGGAATGCCACTAATTTACTGGAATTGGATCTTATTGATTGCTCAAGTCTGGTGAAACT 2159
Query 2180 CCCCTCCTCTATTGGGAATCTTACGAATCTTAAAAAGTTGTATCTCAATAGATGTTCGAG 2239
||||||||||||||||||||| || ||||| |||||||||| ||||||||||||||||||
Sbjct 2160 CCCCTCCTCTATTGGGAATCTCACAAATCTAAAAAAGTTGTTTCTCAATAGATGTTCGAG 2219
Query 2240 TTTGGTGAAACTCCCCTCCTCTATTGGGAATGTCACTAGTCTCAAGGAGTTAAATCTCAG 2299
||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2220 TTTGGTGAAACTCCCTTCCTCTTTTGGGAATGTCACTAGTCTCAAGGAGTTAAATCTCAG 2279
Query 2300 TGGTTGTTCGAGTCTGT-TGGAGATTCCCTCTTCCATCGGGAATACCACTAACCTCAAGA 2358
||||||||| ||||| | ||||||| ||||||||||||||||||| |||||||||||
Sbjct 2280 TGGTTGTTCAAGTCT-TCTGGAGATCCCCTCTTCCATCGGGAATATTGTTAACCTCAAGA 2338
Query 2359 AATTATATGCTGATGGATGTTCAAGTCTGGTGGAACTCCCTTCCTCTATTGGAAATATCA 2418
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct 2339 AAGTATATGCTGATGGATGTTCAAGTCTGGTGCAACTCCCTTCCTCTATTGGAAATAACA 2398
Query 2419 CTAATCTCAGGGAATTGCAACTAATGAATTGTTCGAGTTTGATTGAATTCCCCTCTTCTA 2478
||||||||| ||||||||| ||| ||||||| ||||||||||| |||| ||| |||||||
Sbjct 2399 CTAATCTCAAGGAATTGCATCTACTGAATTGCTCGAGTTTGATGGAATGCCCTTCTTCTA 2458
Query 2479 TTTTAAAGTTAACTCGTCTCGAAGATTTGAATCTCAGTGGATGCTCAAGTCTGGTGAAGC 2538
| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2459 TGTTAAATTTAACTCGTCTCGAAGATTTGAATCTCAGTGGATGCTTAAGTCTGGTGAAGC 2518
Query 2539 TCCCTTCTATTGGGAATGTTATTAATCTCCAAACATTGTTTCTCAGTGGAT-GCTCAAGT 2597
|||| ||||||||||||||||||||||||||| |||||| |||||||| || ||||||||
Sbjct 2519 TCCCCTCTATTGGGAATGTTATTAATCTCCAATCATTGTATCTCAGTG-ATTGCTCAAGT 2577
Query 2598 CTGGTGGAACTCCCCTTCTCTATTGAGAACGCCACTAATCTCCAGACATTGTATCTTAAT 2657
|| |||||||||||||| |||||||||| |||||||||||| | |||||||||||| ||
Sbjct 2578 CTAATGGAACTCCCCTTCACTATTGAGAATGCCACTAATCTCGATACATTGTATCTTGAT 2637
Query 2658 GGATGCTCAGA-TCTACTGGAGCTCCCCTCATCTATTTGGAATATCACTAATCTCCAATC 2716
|||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2638 GGATGCTC-GAATCTACTGGAGCTTCCCTCATCTATTTGGAATATCACTAATCTCCAATC 2696
Query 2717 ATTGTATCTTAACGGATGCTCAAGTCTAAAAGAGCTCCCTTCCTTGGTTGGGAATGCCAT 2776
||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct 2697 ATTGTATCTAAACGGATGCTCAAGTCTAAAGGAGCTCCCTTCCTTGGTTGAGAATGCCAT 2756
Query 2777 TAATCTCCAAAGTTTGTCTCTTATGAATTGTTCAAGTATGGTGGAGCTCCCTTCCTCCAT 2836
|||||| |||||||||||||||||||| ||||||||| |||| |||||||||||||||||
Sbjct 2757 TAATCTTCAAAGTTTGTCTCTTATGAAATGTTCAAGTTTGGTAGAGCTCCCTTCCTCCAT 2816
Query 2837 CTGGA-A-TGCCACTAATCTCTCATACTTAGATGTCAGTAGTTGTTCTAGTTTGGTAGAG 2894
||||| | | | | |||||||||||||||||||||||||| || ||||||||| |||||
Sbjct 2817 CTGGAGAAT-C-AGTAATCTCTCATACTTAGATGTCAGTAACTGCTCTAGTTTGCTAGAG 2874
Query 2895 CTCAATCTT 2903
|||||||||
Sbjct 2875 CTCAATCTT 2883
Score = 782 bits (423), Expect = 0.0
Identities = 483/512 (94%), Gaps = 4/512 (1%)
Strand=Plus/Plus
Query 2931 CTTGTCTCGCACCCGGTGGTTCCAGATTCCCTAATCCTTGATGCAGGAGATTATGAGTCT 2990
|||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct 2881 CTTGTCTCGCACCCCGTGGTTCCAGATTCCCTAATCCTAGATGCAGGAGATTGTGAGTCT 2940
Query 2991 CCGGTGGAGAGACTAGACTGCTCCTTTCAAAATCCGAAGATTGTTCTCAACTTCGCTAAC 3050
| |||| |||||||||| |||| |||||||||||| ||||||||||||||||||||||||
Sbjct 2941 CTGGTGCAGAGACTAGATTGCTTCTTTCAAAATCCAAAGATTGTTCTCAACTTCGCTAAC 3000
Query 3051 TGCTTCAAACTGAATCAAGAAGCAAGAGATCTCATCATCCAGACATCTACTTGTAGAAAT 3110
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 3001 TGCTTCAAACTGAATCAAGAAGCAAGAGATCTCATCATCCAGACATCGGCTTGTAGAAAT 3060
Query 3111 GCGATATTACCAGGTGGAAAAGTGCCTGCATACTTCACTTACCGAGCTACTGGTGATTCT 3170
|||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 3061 GCGATATTACCAGGTGAAAAAGTGCCTGCATACTTCACGTACCGCGCTACTGGTGATTCT 3120
Query 3171 CTAACAGTGAAGTTGAACGAGAGGTATCTTCTTAAATCTTTGAGATTTAAAGCTTGCCTC 3230
||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||
Sbjct 3121 TTAACAGTGAAGTTGAACCAGAAGTATCTTCTTCAATCTTTGAGATTTAAAGCTTGCCTT 3180
Query 3231 TTGCTAGTTGAGGGTCAAAACAAATGGCCACATTGGGGGATGAATATAGTAACTTCTCGA 3290
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 3181 TTGCTAGTTGAGGGTCAAAACAAATGGCCAAATTGGGGGATGAATCTAGTAACTTCTCGA 3240
Query 3291 GAACCAAATGG-CTACATTGTTCTGTACACACCAAGCAGCCATCTTCAAGGTCCACTTTT 3349
|||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3241 GAACCAGATGGAC-ACATTGTTCTGTACACACCAAGCAGCCATCTTCAAGGTCCACTTTT 3299
Query 3350 AATGGAGAATCTGTATACATTTGAATTTGAACTAGTGGTGACTTCCAGTGAGTTCGTTGT 3409
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct 3300 AATGGAGAATCTGTATACATTCGAATTTGAACTAGTGGTGACTTCCAGTGAGTTCGTTTT 3359
Query 3410 GGAGTTCAGAG-TCGACCGCTACAAGTGTGCG 3440
||||||||||| | || || ||||||||||||
Sbjct 3360 GGAGTTCAGAGCT-GATCGTTACAAGTGTGCG 3390
Score = 209 bits (113), Expect = 1e-52
Identities = 557/762 (73%), Gaps = 68/762 (9%)
Strand=Plus/Plus
Query 2170 TGGTGAAACTCCCCTCCTCTATTGGGAAT-CTTACGAATCTTA--AAAAGTTGTATCTCA 2226
||||| | || ||||| || ||||||||| | || ||| ||| || ||| ||||
Sbjct 2078 TGGTGGAGCTTCCCTCTTCCATTGGGAATGC-CACTAAT-TTACTGGAA-TTGGATCT-T 2133
Query 2227 ATAGA-TGTTCGAGTTTGGTGAAACTCCCCTCCTCTATTGGGAATGTCACTAGTCTCAAG 2285
|| || || || ||| ||||||||||||||||||||||||||||| |||| | ||| ||
Sbjct 2134 ATTGATTGCTCAAGTCTGGTGAAACTCCCCTCCTCTATTGGGAATCTCACAAATCTAAAA 2193
Query 2286 GAGTTAAATCTCAGTGGTTGTTCGAGTCTGTTGGAGATTCCCT-CTTCCATCGGGAATAC 2344
|||| ||||| | | ||||||||| || || | | ||||| | || | ||||||
Sbjct 2194 AAGTTGTTTCTCAATAGATGTTCGAGTTTGGTGAA-ACTCCCTTCCTCTTTTGGGAATGT 2252
Query 2345 CACTAACCTCAAGAAATTATATGCTGA-TGGATGTTCAAGTCTGGTGGA-ACTCCCTTCC 2402
||||| |||||| | ||| || || | ||| ||||||||||| |||| | |||| ||
Sbjct 2253 CACTAGTCTCAAGGAGTTAAAT-CTCAGTGGTTGTTCAAGTCTTCTGGAGA-TCCCCTCT 2310
Query 2403 TCTATTGGAAATATCACTAATCTCAGGGAATTGCAA-CTAATGAATTGTTCGAGTTTGAT 2461
|| || || ||||| ||| |||| | || | | || ||| || |||| ||| || |
Sbjct 2311 TCCATCGGGAATATTGTTAACCTCAAGAAAGTATATGCTGATGGAT-GTTCAAGTCTGGT 2369
Query 2462 TG-AATTCCCCTCTTCTATTTTAAAGTTA-ACTCGTCTCGAAG-ATTTGAATCTCAGTGG 2518
| || |||| || |||||| ||| | | ||| |||| ||| | ||| |||| | ||
Sbjct 2370 -GCAACTCCCTTCCTCTATTGGAAA-TAACACTAATCTC-AAGGAATTGCATCT-ACTGA 2425
Query 2519 AT-GCTCAAGTCTGGTG-AA-GCTCC--CTTCTATTGGGAA-TGTTAT-TAATCTCCAAA 2571
|| |||| ||| || || || || || ||||||| | || | ||| | |||| ||
Sbjct 2426 ATTGCTCGAGTTTGATGGAATGC-CCTTCTTCTAT-GTTAAAT-TTAACTCGTCTCGAAG 2482
Query 2572 CATT-GTTTCTCAGTGGATGCTCAAGTCTGGTGGAA-CTCCCCTTCTCTATTGAGAACGC 2629
||| | |||||||||||||| |||||||||| || ||||||| || |||| ||| |
Sbjct 2483 -ATTTGAATCTCAGTGGATGCTTAAGTCTGGTG-AAGCTCCCCT-CT--ATTGGGAATGT 2537
Query 2630 CACTAATCTCCAGA-CATTGTATCTTAATGGAT-GCTCA-GATCTACTGGAGCTCCCCT- 2685
| ||||||||| | |||||||||| | || || ||||| | |||| |||| |||||||
Sbjct 2538 TATTAATCTCCA-ATCATTGTATCTCAGTG-ATTGCTCAAG-TCTAATGGAACTCCCCTT 2594
Query 2686 CATCTATTTG-GAATATCACTAATCTCCA-ATCATTGTATCTTAACGGATGCTC-AAGTC 2742
|| ||||| | |||| |||||||||| | | ||||||||||| | |||||||| || ||
Sbjct 2595 CA-CTATT-GAGAATGCCACTAATCTCGATA-CATTGTATCTTGATGGATGCTCGAA-TC 2650
Query 2743 TAAAAGAGCT-CCCTTCCT-TGGTTGGGAATGCCATTAATCTCCAAAGTTTGTCTCTTAT 2800
|| ||||| |||| | | | |||| ||| || |||||||||| |||| ||| |
Sbjct 2651 TACTGGAGCTTCCCT-CATCTATTTGG-AATATCACTAATCTCCAATCATTGTATCTAAA 2708
Query 2801 -GAATTGTTCAAGTATGGTGGAGCTCCCTTCCTCCATCTG-GAATGCCACTAATCTCTCA 2858
| || | |||||| | |||||||||||||| | || |||||||| |||||| |||
Sbjct 2709 CGGAT-GCTCAAGTCTAAAGGAGCTCCCTTCCTTGGT-TGAGAATGCCATTAATCT-TCA 2765
Query 2859 TACTTAGATGTC--A-GTAGTTGTTCTAGTTTGGTAGAGCTC 2897
| || | | || | | | | |||| |||||||||||||||
Sbjct 2766 AAGTTTG-TCTCTTATGAAAT-GTTCAAGTTTGGTAGAGCTC 2805
> AT5G11250.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) | chr5:3587978-3591960 REVERSE LENGTH=3570
Length=3570
Score = 959 bits (519), Expect = 0.0
Identities = 1765/2345 (75%), Gaps = 172/2345 (7%)
Strand=Plus/Plus
Query 162 GGGGAAGATGTCCGCAAAGGCTTTCTCAGTCACATTCAGAAGGAGTTTCAAAGAAAGGGT 221
|||||||||||||| | || |||||||||||||||||||| |||||||||||||| |||
Sbjct 208 GGGGAAGATGTCCGTAGAGACTTTCTCAGTCACATTCAGATGGAGTTTCAAAGAATGGGA 267
Query 222 ATCACACCATTCATTGATAATGAGATGAAGAGAGGAGGATCCATTGGTCCTGAGC-TCTT 280
||||| |||||| ||||||||||||| || ||||||| |||||| |||||||||| || |
Sbjct 268 ATCACTCCATTCGTTGATAATGAGATTAAAAGAGGAGAATCCATCGGTCCTGAGCTTC-T 326
Query 281 ACAGGCAATTCGAGGATCTAAGATCGCGATCATCTTGCTCTCGAGGAACTATGGTTCTTC 340
| ||| ||| |||| |||||||| || || ||||||||||| |||||||||| ||||||
Sbjct 327 GCGGGCTATTAGAGGGTCTAAGATAGCAATTATCTTGCTCTCTAGGAACTATGCTTCTTC 386
Query 341 GAAGTGGTGTCTTGATGAATTGGTGGAGATTATGAAATGCAGAGAAGAGT-TGGGTCAAA 399
|| ||||||||||| ||| |||||||||||||||||||||||||||||| ||| |||||
Sbjct 387 AAAATGGTGTCTTGACGAACTGGTGGAGATTATGAAATGCAGAGAAGAGTATGG-TCAAA 445
Query 400 CAGTGATGACCGTTTTTTATGATGTGGATCCATCTGATGTGAGGAAGCAGAAGGGAGATT 459
| |||||| || | ||||| | |||||||| |||||||| | || | || |||||||
Sbjct 446 CTGTGATGGCCATATTTTACAAAGTGGATCCTTCTGATGTAAAAAATCTGACCGGAGATT 505
Query 460 TTGGGAAGGTTTTTAGAAAAACTTGTGTTGG-AAGACCAGAGGAGGTGAA-GCAGAAATG 517
| ||||| || |||||||||||||||| || || |||| || ||| | | || |||
Sbjct 506 TCGGGAAAGTCTTTAGAAAAACTTGTGCCGGTAA-ACCAAAGAAGGACATTGG-GAGATG 563
Query 518 GA-AGCAAGCTTTG-ACCA-GTG-CTGCAAATATACTCGGGGAGGATTCTCGCAACTGGG 573
|| | ||||||| | | | ||| | || || || || | |||| ||||||||
Sbjct 564 GAGA-CAAGCTTGGGAAAAAGTGGCCACAG-TAG-CT-GGTTACCATTCAATCAACTGGG 619
Query 574 AAAATGAAGCAGATATGATCATTAAAATAGCAAAAGATGTCTCCGATG-TGTTGAGTT-- 630
| |||||||| | ||||||| ||||| || | ||| | || || | |||| ||
Sbjct 620 ATAATGAAGCGGCCATGATCAAGAAAATCGCCACTGATATTTC-GAACATATTGA-TTAA 677
Query 631 TTACAC-CAT-CAAAG-GATTTTGATGAGTTTGTTGGCATTGA-AGCTCAT--ACGACAG 684
|| ||| | | || | ||||| || | ||| ||||| || || ||||||| | || |
Sbjct 678 TTCCACTCCTTCAC-GTGATTTCGACGGGTTAGTTGGGAT-GAGAGCTCATTTA-GAAA- 733
Query 685 AGAT-AA-CTTCGTTGTTACAACTTGAT-CTGGAAGAAGTGAGAATGATAGGGATTTGGG 741
|||| || | |||||||| || || | | | ||||| || || || ||||||||||
Sbjct 734 AGATGAAAC--CGTTGTTATGCCTAGACACAG-ACGAAGTAAGGATAATTGGGATTTGGG 790
Query 742 GTCCTGCTGGAATTGGCAAGACTACCATCT-CCAGGGTTCTATATAACAAACTCTTCCAT 800
||||| |||| ||||| ||||| || || | |||| ||| |||| ||| |||||| |||
Sbjct 791 GTCCTCCTGGGATTGGGAAGACCACAAT-TGCCAGAGTTGTATACAACCAACTCTCCCA- 848
Query 801 CAATT-CCAACTGGGCG-CAATCATTGACAACATTAAAGTACGTTAT-CCAAGACCT--T 855
|| || ||||||| | | | | || || || || |||| | ||| ||| |||| |
Sbjct 849 CAGTTTCCAACTGAGTGTCTTT-ATGGAGAATATCAAAGCAAACTATACCA-GACCAACT 906
Query 856 GTCAC-GATGAGTACAGCGCAAAACTGCAATTACAGAAAGAAT-TGT-TGTCTCAGATGA 912
| | | ||||| ||||| ||||| |||||||||| | | ||| | | ||||||| || |
Sbjct 907 GGCTCCGATGACTACAGTGCAAAGTTGCAATTACA-ACA-AATGTTTATGTCTCAAATAA 964
Query 913 TTAACCAGAAAG-ATATGGTGGTTCCTCATTTAGGGGTTGCCCAAGAGAGGTTGAAGGAC 971
|| || |||| |||| | | ||||||||||||| ||||||||||| |||||||| |||
Sbjct 965 CCAAGCA-AAAGGATATAGAGATTCCTCATTTAGGAGTTGCCCAAGATAGGTTGAAAGAC 1023
Query 972 AGGAAAGTTCTTCTAGTTCTTGATGACGTCGATGC-G-CTAGTACAACTTGATGCCATGG 1029
| ||||||||| | |||||||||| || || | | | ||||||||| ||||| ||||
Sbjct 1024 AAGAAAGTTCTGGTCGTTCTTGATGGGGT-GAACCAGTC-AGTACAACTAGATGCGATGG 1081
Query 1030 CGAAAGATG-TACGATGGTTTGG-CCTTGGAAGTCGCATTATCGTCGTAACACAAGATCT 1087
||||||| | | | |||||||| ||| ||| |||| || ||| | |||||||||||
Sbjct 1082 CGAAAGAAGCTTGG-TGGTTTGGTCCTGGGA-GTCGAATCATCATTACAACACAAGATC- 1138
Query 1088 A-AAACTTTTAAAAGCTCATGGGATCAAGTATATTTACAAGGTTGATTTTCCAACTTCTG 1146
| |||||||| | ||| |||||||| || ||||||||||||| ||||||||| | |||
Sbjct 1139 AGAAACTTTTTAGAGCACATGGGATTAACCATATTTACAAGGTGGATTTTCCACCAACTG 1198
Query 1147 ATGAGGCTCTAGAAATATTCTGCATGTATGCTTTTGGTCAGAAGTCCCCTAAAGTTGGTT 1206
| |||||||| |||| ||||||||||||||||||||||| || |||||||||| |||||
Sbjct 1199 AAGAGGCTCTTCAAATCTTCTGCATGTATGCTTTTGGTCAAAATTCCCCTAAAGATGGTT 1258
Query 1207 TTGAGCAGATTGCTCGGACGGTTACAACA-CTTGCTGGTAAACTCCCGTTAGGACTAAGG 1265
|| || | ||||| ||| || | || | ||||| ||||| ||||| || || |||||
Sbjct 1259 TTCAGAACCTTGCTTGGAAAGTAATAA-ATCTTGCCGGTAACCTCCCTTTGGGGCTAAGA 1317
Query 1266 GTTATGGGATCCTATTT-ACGGCGAATGTCGA-AGCAGGAGTGGGCGA-GATCAATACCA 1322
||||||| |||||||| | || ||||||||| || || ||||| | | ||| |||||
Sbjct 1318 ATTATGGGCTCCTATTTTAGGG-GAATGTCGAGAGAAG-AGTGGAAAAAG-TCATTACCA 1374
Query 1323 AGGTTA-AGAACCAGCCTTGACGATGATATTGAGAGCGTTTTGAAGTTCAGTTACAACTC 1381
|| ||| ||| |||||||||| ||||||| | ||| ||||||||||||| || || |
Sbjct 1375 AGATTAGAGAGT-AGCCTTGACGCTGATATTCAAAGCATTTTGAAGTTCAGCTATGACGC 1433
Query 1382 CTTAGCTG-CAGAAGA-AAAAGATTTATTTCTTCACATAGCCTGtttttttAGAAGGGAA 1439
|||| || | ||||| |||| ||||||||||||| ||||| |||||||| | | || ||
Sbjct 1434 TTTAGATGAC-GAAGATAAAA-ATTTATTTCTTCATATAGCATGTTTTTTCA-ACGGTAA 1490
Query 1440 AG-GATTGAGACT-TTGGAAGTGTTTCTTGCAAAGAAGTTTGTGGATGTGAGGCAAGGGC 1497
|| |||| ||| | ||||||| | ||||||||||||||||||||| || |||||| | |
Sbjct 1491 AGAGATTAAGA-TATTGGAAGAGCATCTTGCAAAGAAGTTTGTGGAAGTCAGGCAAAGAC 1549
Query 1498 TCCAAA-TCTTAGCCGATAAATCTCTCTTGTCTAT--G-AACTTGGGAAA-TATAGAGAT 1552
| || ||||||| || ||||||||| | ||| | | || ||||| || |||||||||
Sbjct 1550 TT-AACGTCTTAGCTGAGAAATCTCTCATATCTTTTAGCAA-TTGGGGAACTATAGAGAT 1607
Query 1553 GCATAATTTGCTAGTACAACTAGGTCTAGACATTATTCGTAAACAATCCATTCATAAGCC 1612
|||||| |||||| | |||||||| ||| ||| ||||||| ||||| || ||| ||||
Sbjct 1608 GCATAAACTGCTAGCAAAACTAGGTGGAGAAATTGTTCGTAACCAATCTATCCATGAGCC 1667
Query 1613 TGGGA-AACGTCAGTTTTTGGTTGATGCTGAAGATATTTGTGAAGTACTCACCGATGAT- 1670
||| | |||| ||||||||| |||||| ||||| || ||||| || || | | ||||
Sbjct 1668 TGG-ACAACGCCAGTTTTTGTTTGATGGAGAAGAGATATGTGATGTGCTGAATGGTGATG 1726
Query 1671 -A-CAGGTACCAGAACTCTTGTAGGCATTGATCTCGAGTTATCTGGTGTAATCGAGGGTG 1728
| |||||| | || | | ||||||| ||| || | | | | | |||||||| |
Sbjct 1727 CAGCAGGTAGTAAAAGTGTAATAGGCATAGATTTCCACT-A-CA--T--AATCGAGGAAG 1780
Query 1729 TGATAA-ATAT-AAGTGAAAGAGCCTTTGAAAGAATGTGC-AATCTCCAGTTCTTAAGAT 1785
|| |||| || ||| |||| |||||| |||||| | ||||| |||||||||||||
Sbjct 1781 A-ATTCGATATGAA-TGAGAGAGTTTTTGAAGGAATGT-CTAATCTTCAGTTCTTAAGAT 1837
Query 1786 TCCACCACCCATATGGTGATCGTTGTCACGACATATTGTACTTA-CC-GCAAGGTTTGAG 1843
|| | | || ||| | | | | |||| | | | ||| || || ||| ||||
Sbjct 1838 TCGA-------T-TG-TGACCAT-G--AT-ACAT-T-GCAATTATCCCGC--GGTCTGAG 1880
Query 1844 CCATATATCTCGAAAACTT-AGATTACTACATTGGGA-ACGTTATCC-ACTGACATGTTT 1900
| || | ||||| |||||| || |||||| ||||| | | || ||| | ||||||||||
Sbjct 1881 CTATCTTTCTCGTAAACTTCAG-TTACTAGATTGG-ATATATTTTCCGA-TGACATGTTT 1937
Query 1901 GCCTTCCAA-GTTTAATCCTG-AGTTCCTTGTCAAAATAAACATG-CGAGACAGCATGCT 1957
|||||| | || || | || |||||||| | || ||||| || || |||||| |||
Sbjct 1938 GCCTTCTACTGTG-AA-CGTGGAGTTCCTTATTGAACTAAACCTGACGC-ACAGCAAGCT 1994
Query 1958 TGAGAAGCTGTGGGAAGGAAATGAACC-CATT-AGAAATCTCAAATGGATGGATTTGAGT 2015
||| | | ||||||||||| | |||| | || | || ||||| |||||||||||||
Sbjct 1995 TGATATGTTGTGGGAAGGAGTTAAACCGC-TTCATAA-TCTCAGGCAGATGGATTTGAGT 2052
Query 2016 TCTTGTGTAAACCTGAAGGAGCTGCCTGATTTCTCTACTGCCACTAATCTCCAAGAA-TT 2074
| || ||||||| |||||||||| |||||| |||| ||||||| |||||||| | || ||
Sbjct 2053 TATTCTGTAAACTTGAAGGAGCTTCCTGATCTCTCAACTGCCATTAATCTCCGA-AAGTT 2111
Query 2075 GAGACT--CATAGATTGTTTAAG-CTTGGTGGAGCTCCCCTCTTCCATCGGGAATGTCA- 2130
|| || | || |||| | || || | | | ||||| |||| || ||||||| ||
Sbjct 2112 GATTCTTTC-TA-ATTGCTCCAGTCT-GATCAAACTCCCTTCTTGTATTGGGAATGCCAT 2168
Query 2131 CTAATTTACT-GGAATTGGATCTTATTGGTTGCTCTAGTCTGGTGAAACTCCCCTCCTCT 2189
| ||| | | ||| || ||||||| ||| ||||| ||||| ||| | || ||||| | |
Sbjct 2169 C-AATCT-CGAGGATTTAGATCTTAATGGATGCTCAAGTCTTGTGGAGCTTCCCTC-T-T 2224
Query 2190 ATTGGGAAT-CTTACGAATCTT-AAAAAGTTG-TATCT-CAATAGATGTTCGAGTTTGGT 2245
||||| || | | || ||| ||||| ||| | ||| | || || || | | ||||
Sbjct 2225 -TTGGGGATGCC-ATTAACCTTCAAAAA-TTGCT-TCTTCGCTAT-TGCTCAAATCTGGT 2279
Query 2246 GAAACTCCCCTCCTCTATTGGGAATGTCACTAGTCT-CAAGGAGTTAAATCTC-AGTGGT 2303
| | |||||||| ||||||||||||| || || ||| | ||| || |||| | | |
Sbjct 2280 GGAGCTCCCCTCTTCTATTGGGAATGCCATTAATCTTCG-GGAATTGGATCTTTATTA-T 2337
Query 2304 TGTTCGAGTCTGTTGGAGA-TTCCCTCTTCCATCGGGAATACCACTAACCTCAAGAAATT 2362
|| ||||||||| | ||| ||||||| || || |||||| ||| ||| || || ||
Sbjct 2338 TGCTCGAGTCTGATC-AGACTTCCCTCCTCTATTGGGAATGCCATTAATCTTTTGATTTT 2396
Query 2363 ATATGCTGAT-GGATGTTCAAGTCTGGTGGAACTCCCTTCCTCTATTGGAAATATCACTA 2421
| || || | ||||| |||| ||| |||| ||||| ||||| ||||| ||| || ||
Sbjct 2397 AGAT-CTTAACGGATGCTCAAATCTATTGGAGCTCCCATCCTCCATTGGGAATGCCATTA 2455
Query 2422 ATCTC 2426
|||||
Sbjct 2456 ATCTC 2460
> AT3G04220.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr3:1109118-1112188 REVERSE LENGTH=2604
Length=2604
Score = 531 bits (287), Expect = 2e-149
Identities = 1203/1625 (74%), Gaps = 144/1625 (9%)
Strand=Plus/Plus
Query 156 TTCCGTGGGGAAGATGTCCGCAAAGGCTTTCTCAGTCACATTCAGAAGGAGTTTCAAAGA 215
||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct 205 TTCCGCGGGGAAGATGTCCGCAAAGACTTCCTCAGTCACATTCAGAAGGAGTTTCAAAGA 264
Query 216 -AAGGGTATCACACCATTCATTGATAATGAGATGAAGAGAGGAGGATCCATTGGTCCTGA 274
|||| ||||||||||| ||||||| | || |||||||||| ||| || ||||| ||
Sbjct 265 CAAGGA-ATCACACCATTTGTTGATAACAATATCAAGAGAGGAGAATCTATCGGTCCAGA 323
Query 275 GCTC-TTACAGGCAATTCGAGGATCTAAGATCGCGATCATCTTGCTCTCGAGGAACTATG 333
||| || | ||| ||| |||| || |||||||| |||||||||||||| | |||||| |
Sbjct 324 ACTCATT-CGGGCGATTAGAGGGTCCAAGATCGCAATCATCTTGCTCTCCAAGAACTACG 382
Query 334 GTTCTTCGAAG-TGGTGTCTT-GATGAATTGGTGGAGATTATGAAA-TGCAGAG-AAGAG 389
|||||| ||| ||||| ||| || |||||||||||||| || ||| |||| || ||||
Sbjct 383 CTTCTTC-AAGCTGGTG-CTTAGACGAATTGGTGGAGATCAT-AAAGTGCA-AGGAAGAA 438
Query 390 TTGGGTCAAACAGTGAT-GACCGTTTTTTATGATGTGGATCCATCTGATGTGAGGAAGCA 448
|||||||||||||||| | | |||| || | |||||||||||| ||| | |||||
Sbjct 439 ATGGGTCAAACAGTGATAGTCA-TTTTCTACAAAGTGGATCCATCTCTTGTAAAGAAGCT 497
Query 449 GAAGGGAGATTTTGGGAAGGTTTTTAGAAAAACTTGTGTTGG-AA-GACCAGAGGAGG-- 504
|| || ||||| |||||||| || ||||| |||||| || || || |||| |
Sbjct 498 GACCGGTGATTTCGGGAAGGTATTCAGAAACACTTGTAAGGGTAAAGAA-AGAGAAAACA 556
Query 505 T-GAAGCAGAAATGGA-AGCAAGCTTTGACCAGTGCT-GCAA-ATATA-CTCGGGGAGGA 559
| ||| ||| |||| || ||||||| | | | | |||| | ||| || || | ||
Sbjct 557 TTGAA--AGA--TGGAGAG-AAGCTTTCAAAAAAG-TAGCAACA-ATAGCT-GGTTACGA 608
Query 560 TTCTCGCAACTGGGAAAATGAAGCAGATATGATC-ATTAAAATAG-CAAAAGATGTCTCC 617
||| | || ||||| || ||| | | |||||| | ||||||| || ||| | ||
Sbjct 609 TTCAAGAAAATGGGATAACGAATCGGGCATGATCGAA-AAAATAGTCAGT-GATATTTCG 666
Query 618 GATGTGTTGAGTT-TT--ACACCATCAAAG-GATTTTGATGAGTTTG-TTGGCATTGAAG 672
|| || ||| | || || || ||| | |||||||| || |||| |||| || | ||
Sbjct 667 GAAATGCTGAATCATTCGACGCCGTCAC-GTGATTTTGACGA-TTTGATTGGGATGGGAG 724
Query 673 CTCATACG-ACAGAGAT-AA-CTTCGTTGTTACAACTT-GA-TCTGGAAGAAGTGA-GAA 726
||| | | | | |||| || | | |||||| | | | || || | | ||| ||| ||
Sbjct 725 ATCACATGGAAA-AGATGAAAC--CATTGTTAGA-CATAGACTCAG-ATGAAATGAAGAC 779
Query 727 TGATAGGGATTTGGGGTCCTGCTGGAATTGGCAAGACTACCATCTCC-AGGG-TTCTATA 784
|||||| || ||||||||| |||| ||||||| || ||||| | | || || ||||
Sbjct 780 -GATAGGAATATGGGGTCCTCCTGGGGTTGGCAAAACCACCAT-TGCTAGATCTT-TATA 836
Query 785 TAA-CAA-ACTCTTCCATCAATTCCAACTGGGCG-CAATCATTGACAACATTAAAGTA-C 840
||| ||| |||| || |||| |||||| | | | | || || | || ||| |
Sbjct 837 TAATCAACACTCGGACA--AATTTCAACTGAGTGTCTTT-ATGGAGAGTATCAAAACCGC 893
Query 841 GTTATC-CAAGACCT---TGT-CACGATGAGTAC-AGCGCAAAACT-GCAATTACAGA-A 892
|| | | ||| ||| ||| | |||||| ||| | | |||| | |||| |||| | |
Sbjct 894 GT-A-CACAATACCAGCGTGTTC-CGATGACTACTAT-G-AAAAGTTGCAACTACA-ACA 947
Query 893 A-GAATTGTTGTCTCAGATGATTAACCAG-AAAGATATGGTGGTTCCTCATTTAGGGGTT 950
| | || | |||||| || | |||||| ||| || | | | || |||||||| |||
Sbjct 948 ACGGTTTCT-GTCTCAAATAACCAACCAGGAAA-ATGTCCAGATCCCACATTTAGGAGTT 1005
Query 951 GCCCAAGAGAGGTTGAAGGACAGGAAAGTTCTTCTAGTTCTTGATGACGTCGA-TGC-G- 1007
|| ||||| |||||||| |||| |||||||||| | ||| ||||||| || || | | |
Sbjct 1006 GCACAAGAAAGGTTGAACGACAAGAAAGTTCTTGTTGTTATTGATGATGT-GAAT-CAGT 1063
Query 1008 CTAGTACAACTTGATGCCATGGCGAAAGATGTACGAT-GGTTTGG-CCTTGGAAGTCGCA 1065
| ||||||| | |||||| |||||||||| | ||| || | || ||| ||| |||| |
Sbjct 1064 C-AGTACAAGTAGATGCCTTGGCGAAAGAAA-ATGATTGGCTAGGTCCTGGGA-GTCGGA 1120
Query 1066 TTATCGTCGTAACACAAGATCTAA-AACTTTTAAAAGCTCATGGGATC-AAGTATATTTA 1123
||||| || ||| ||||| | | || |||| | || ||||||||| || |||||||
Sbjct 1121 TTATCATCACAACCCAAGACCGAGGAA-TTTTGAGGGCGCATGGGATCGAAC-ATATTTA 1178
Query 1124 CAAGGTTGATTTTCC-AACTTCTGATGAGGCTCTAGAAATATTCTGCATGTATGCTTTTG 1182
| |||| |||| ||| |||| ||| ||||| || |||| || |||||| |||||||||
Sbjct 1179 CGAGGTGGATTATCCCAACTA-TGAAGAGGCCCTTCAAATCTTTTGCATGCATGCTTTTG 1237
Query 1183 GTCAGAAGTCCCC-TAAAGTTGGTTTTGAGCAGATTGCTCGGACG-GTTACAACACTTGC 1240
|||| |||||||| || | |||||||||| || |||||| || |||||||||||| |
Sbjct 1238 GTCAAAAGTCCCCATAT-GATGGTTTTGAGGAGCTTGCTCA-ACAAGTTACAACACTTTC 1295
Query 1241 TGGTAAACTCCCGTTAGGACT-AAGGGTTATGGGATCCTATTTACGGCGAATGTCGAAGC 1299
|||| ||| || || ||||| |||| |||||||||||||||| ||| ||||| | ||||
Sbjct 1296 GGGTAGACTTCCTTTGGGACTTAAGG-TTATGGGATCCTATTTCCGGGGAATGACCAAGC 1354
Query 1300 AGGAGTGGGCGA-GATCAATACCAAGGTTAAGAAC-CAGCCTTGACG-ATGATATTGAGA 1356
|||||||| | | | || |||||||| |||| || || |||||||| | | |||||||
Sbjct 1355 AGGAGTGGACAATGG-CACTACCAAGGGTAAGGACTCA-CCTTGACGGAAAA-ATTGAGA 1411
Query 1357 GCGTTTTGAAGTTCAGTTACAACT-CCTTA-GCTGCA-GAAGA-AAAAGATTTATTTCTT 1412
|| || | || |||||||| | | ||||| | || | | ||| ||||| ||| || |||
Sbjct 1412 GCATTCTAAAACTCAGTTACGA-TGCCTTATG-TG-ATGTAGATAAAAG-TTTGTTCCTT 1467
Query 1413 CA-CATAGCCTGttttttt-AGAAGGGAAAGGATTGAGACTTTG--GAAGTGTTTCTTGC 1468
|| | |||| || | ||| | || | | | || || || | ||| | ||||
Sbjct 1468 CATC-TAGCTTGCTCTTTCCACAATG-AT-G-ATACCGAGTTAGTAGAACAGCAGCTTGG 1523
Query 1469 AAAGAAGTT-TGTGGATGTGAGGCAAGGGCTCCAAATCTTAGCCGATAAATCTCTCT-TG 1526
||||||||| | |||| ||||||||||||| || ||||||| || ||||| || | |
Sbjct 1524 AAAGAAGTTCTC-GGATTTGAGGCAAGGGCTTCACGTCTTAGCTGAGAAATCGCT-TATA 1581
Query 1527 TC-TATGAACTTGGGAAAT-ATA-GAGATGCATAATT-TGCTAGTACAACTAGGTCTAGA 1582
| |||| | || || | ||| | |||||| || |||| | |||||| ||| |||
Sbjct 1582 -CATATGGATTTAAGAC-TGATACGT-ATGCATG-TTCTGCTGGCACAACTTGGTAGAGA 1637
Query 1583 CATTATTCGTAAACAATCCATTCATAAGCCTGGGA-AACGTCAGTTTTTGGTTGATGCTG 1641
||| |||||||||||||||||||| ||||||| | ||||||| ||||||||||||||
Sbjct 1638 AATTGTTCGTAAACAATCCATTCATGAGCCTGG-ACAACGTCAATTTTTGGTTGATGCA- 1695
Query 1642 A-AGATATTTGTGAAGTACTCACCGATGATACAGGTACCAGAACTCTTGTAGGCATTGAT 1700
| ||||||| ||||||||||||| ||||||||||| | |||| | | ||||||| |||
Sbjct 1696 ACAGATATTCGTGAAGTACTCACTGATGATACAGGCAGTAGAAGTGTAATAGGCATAGAT 1755
Query 1701 CTCGA 1705
||||
Sbjct 1756 TTCGA 1760
> AT3G44410.1 | Symbols: | pseudogene, disease resistence protein,
putative, similar to disease resistance protein RPP1-WsB
(Arabidopsis thaliana) gi|3860165|gb|AAC72978 | chr3:16055051-16055770
REVERSE LENGTH=720
Length=720
Score = 130 bits (70), Expect = 1e-28
Identities = 138/170 (81%), Gaps = 8/170 (5%)
Strand=Plus/Plus
Query 2997 GAGAGACTAGACTGCTCCTTTCAA-AATCCGA-AGATT-GTTCTCAACTTCGCTAACTGC 3053
|||||| | || || | |||| || ||||| | ||||| | |||| | || || ||||||
Sbjct 214 GAGAGAATGGATTGTTGCTTT-AATAATCC-AGAGATTCG-TCTCCAGTTTGCCAACTGC 270
Query 3054 TTCAAACTGAATCAAGAAGCAAGAGATCTCATCATCCAGACATCTACTTGTAGAAATGCG 3113
|||||||||||||||||||||||||| |||||||| || ||||| |||| |||| |||||
Sbjct 271 TTCAAACTGAATCAAGAAGCAAGAGACCTCATCATGCACACATCGACTTCTAGATATGCG 330
Query 3114 ATATTACCAGGTGGA-AAAGTGCCTGCATACTTCACTTACCGAGCTACTG 3162
|| ||||| ||| | ||| | || |||| ||||| | ||||||||||||
Sbjct 331 ATGTTACCCGGTACACAAATT-CCAGCATGCTTCAATCACCGAGCTACTG 379
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 177942146821
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5