BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg948681
Length=1666
Score E
Sequences producing significant alignments: (Bits) Value
AT5G44380.1 | Symbols: | FAD-binding Berberine family protein ... 2422 0.0
AT5G44390.1 | Symbols: | FAD-binding Berberine family protein ... 1290 0.0
AT5G44400.1 | Symbols: | FAD-binding Berberine family protein ... 1081 0.0
> AT5G44380.1 | Symbols: | FAD-binding Berberine family protein
| chr5:17878722-17881440 REVERSE LENGTH=1848
Length=1848
Score = 2422 bits (1311), Expect = 0.0
Identities = 1553/1670 (93%), Gaps = 15/1670 (1%)
Strand=Plus/Plus
Query 1 CTTGCATATTCGCTGCAAGGATGGGGATTTCAAAACCACACCCTACAATTTCTTGTAtt- 59
||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||
Sbjct 52 CTTGCATATTCGCTGCAAGGATGGGAAATTCAAAACCACTCCCTACAATTTCTTGTATTA 111
Query 60 ttgtttttagttttttATCTCTCATTATATTGCATAACACCAACTTCTTCATCAGCCTCC 119
| | ||| ||| || ||| | ||||| |||||||||||||||||||||||||||||||||
Sbjct 112 TAG-TTTCAGTCTTGTATTTTTCATTCTATTGCATAACACCAACTTCTTCATCAGCCTCC 170
Query 120 CTCCAAGATCAATTCATAAACTGTGTCAAAAGAAACACGCATGTTTCTTTTCCACTCGAG 179
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 171 ATCCAAGATCAATTCATAAACTGTGTCAAAAGAAACACACATGTTTCTTTTCCACTCGAG 230
Query 180 ACTACGTTATTTGCTCCTGCAAAAAACGTCTCTATGTTCAGCCAAGTCCTTGAATCAACG 239
| |||||||| | ||||| |||||||||||| |||||| ||||||||||||||| |||
Sbjct 231 AAAACGTTATTCACCCCTGCGAAAAACGTCTCTTTGTTCAACCAAGTCCTTGAATCGACG 290
Query 240 GCTCAAAATCTCCAGTTCTTGGCAAAATCCTTGCCTAAACCGGGATTCATATTTAGGCCA 299
|||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||
Sbjct 291 GCTCAAAATCTCCAGTTCTTGGCAAAATCCATGCCTAAACCGGGATTCATATTCAGACCG 350
Query 300 ATTCACGAGTCTCAAGTCCAAGCTTCTATCATCTGTTCTAAGAAACTCGGAATTCATTTT 359
|||||| ||||||||||||||||||| ||||| ||||| |||||||||||||||||||||
Sbjct 351 ATTCACCAGTCTCAAGTCCAAGCTTCCATCATTTGTTCAAAGAAACTCGGAATTCATTTT 410
Query 360 CGTGTTAGAAGTGGCGGTCACGATTTCGAGGCCTTGTCTTATGTCTCACGGATTGAAAAA 419
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 411 CGTGTTAGAAGTGGCGGTCACGATTTCGAGGCCTTGTCTTATGTTTCACGGATTGAAAAA 470
Query 420 CCGTTTATATTAATCGATCTGTCGAAATTGAGACAAGTCGATGTTGATATTGAAACCAAT 479
|||||||||||| |||| ||||| ||||||| |||| || |||||||||||||| |||||
Sbjct 471 CCGTTTATATTACTCGACCTGTCAAAATTGAAACAAATCAATGTTGATATTGAATCCAAT 530
Query 480 AGTGCTTGGGTTCAACCTGGTGCTACGCTTGGTGAGCTTTACTACAGAATTGCAGAGAAG 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 531 AGTGCTTGGGTTCAACCTGGTGCTACGCTTGGTGAGCTTTACTACAGAATTGCAGAGAAG 590
Query 540 AGCAAAG-TCCATGGATTTCCCGCGGGTTTGTGTACGAGCGTAGGCATAGGTGGGTATAT 598
||| ||| ||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct 591 AGC-AAGATCCATGGATTTCCCGCGGGTTTGTGCACAAGTGTAGGCATAGGTGGGTATAT 649
Query 599 GACAGGGGGTGGATACGGTTCCTTGATGAGGAAGTATGGTCTTGCGGGAGATAATGTTCT 658
|||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 650 GACAGGCGGTGGATACGGTACCTTGATGAGGAAGTATGGTCTTGCGGGAGATAATGTTCT 709
Query 659 AGACGTAAAGATGGTTGATGCAAATGGTAAATTACTCGACAGAACCGCGATGGGTGAGGA 718
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 710 AGACGTAAAGATGGTTGATGCAAATGGTAAATTACTCGACAGAGCCGCGATGGGTGAGGA 769
Query 719 CCTATTTTGGGCGCTTAGAGGAGGCGGTGGAGCGAGTTTTGGGATAGTTCTCGCATGGAA 778
||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 770 CCTATTTTGGGCGATTAGAGGAGGCGGTGGAGCGAGTTTCGGGATAGTTCTAGCATGGAA 829
Query 779 GATCAAGCTTGTTCCTGTTCCTGAGACCGTAACCATCTTCACCGTTACCAAAACGTTAAA 838
|||||||||||||||||||||| |||| || ||| ||||||| || |||||||||||| |
Sbjct 830 GATCAAGCTTGTTCCTGTTCCTAAGACTGTTACCGTCTTCACTGTCACCAAAACGTTAGA 889
Query 839 ACAAGACGCAAGATTGAAGATTATTTCTAAGTGGCAACAAATTGCATCCAAGCTTGTCGA 898
|||||||||||||||||||| |||||||||||||||||||||| |||||||| || | ||
Sbjct 890 ACAAGACGCAAGATTGAAGACTATTTCTAAGTGGCAACAAATTTCATCCAAGATTATTGA 949
Query 899 AGAGCTACACATCCGATTGGTACTCAGAGCCGTTGGAAATAATGGAAACAAGACTATTAC 958
|||| ||||||||||| ||||||||||||| | ||||||| |||||||||||||| | ||
Sbjct 950 AGAGATACACATCCGAGTGGTACTCAGAGCAGCTGGAAATGATGGAAACAAGACTGTGAC 1009
Query 959 AATGTCCTATTTAGGTCAGTTTCTTGGCGAGAAAGGCACCTTGATGAAGGTTATGGAGAA 1018
|||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1010 AATGACCTACCTAGGTCAGTTTCTTGGCGAGAAAGGCACCTTGCTGAAGGTTATGGAGAA 1069
Query 1019 GGATTTTCCAGAACTAGGGTTAACTCAAAAGGATTGTACCGAAATGAGCTGGATTGAATC 1078
|| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct 1070 GGCTTTTCCAGAACTAGGGTTAACTCAAAAGGATTGTACTGAAATGAGCTGGATTGAAGC 1129
Query 1079 CACCCTTTTCCATGGTGGATTTCCAACTGGTTCTCCTATTGAAATTTTGCTTCAACGCAA 1138
| ||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||
Sbjct 1130 CGCCCTTTTCCATGGTGGATTTCCAACAGGTTCTCCTATTGAAATTTTGCTTCAGCTCAA 1189
Query 1139 GTCGCCTTTAGGAAAAGATTACTTCAAAGCAACGTCAGATTTCGTTAAAGAACCTATTCC 1198
||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1190 GTCGCCTCTAGGAAAAGATTACTTCAAAGCAACGTCGGATTTCGTTAAAGAACCTATTCC 1249
Query 1199 TGTTTTAGGGCTCAAAGGAATTTTCAAAAGATTGATTGAAGGAAAGATAGA-ATTTCTCA 1257
||| |||||||||||||||| ||||||||||||||||||||||| | | | |||||| |
Sbjct 1250 TGTGATAGGGCTCAAAGGAATATTCAAAAGATTGATTGAAGGAAACACA-ACATTTCTGA 1308
Query 1258 ACTGGACTCCCTACGGTGGTATGATGTCGAAAATCTCTGAATCCGCGATCCCATTTCCTC 1317
|||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||| |
Sbjct 1309 ACTGGACTCCTTACGGTGGTATGATGTCGAAAATCCCTGAATCTGCGATCCCATTTCCGC 1368
Query 1318 ACAGAAACGGAACCCTCTTCAAGATTCTCTATTACGCGAACTGGCTAGAGAATGACAAGA 1377
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1369 ATAGAAACGGAACCCTCTTCAAGATTCTCTATTACGCGAACTGGCTAGAGAATGACAAGA 1428
Query 1378 CATCGATGAGTAGAAAAATCAAATGGATCAAAGAGATATACAGTTACATGGCGCCTTATG 1437
|||||| | |||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct 1429 CATCGA-G--TAGAAAAATCAACTGGATCAAAGAGATATACAATTACATGGCGCCTTATG 1485
Query 1438 TCTCAAGCAATCCAAGAGAAGCATATGTGAACTACAGAGATCTAGACTTCGGACAGAACG 1497
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1486 TCTCAAGCAATCCAAGACAAGCATATGTGAACTACAGAGATCTAGACTTCGGACAGAACA 1545
Query 1498 AGAACAACTCAAAGTTTAACTTCATCGAAGCTAAAATCTGGGGAGCTAAGTACTTCAAAG 1557
|||||||| ||||| |||||||||| |||||||||||||||||| |||||||||||||||
Sbjct 1546 AGAACAACGCAAAGGTTAACTTCATTGAAGCTAAAATCTGGGGACCTAAGTACTTCAAAG 1605
Query 1558 ACAATTTCAACAGATTGGTGAAGATTAAAACAAAGGTTGATCC-GAATAACTTCTTCAGG 1616
|||||| |||||||||||||||||||||| ||||||||||| || ||||||||||||
Sbjct 1606 GCAATTTTGACAGATTGGTGAAGATTAAAACCAAGGTTGATCCAGAG-AACTTCTTCAGG 1664
Query 1617 CACGAGCAGAGTATCCCACCTATGCCCTGA--ACGAAGCTAGGTTCATGA 1664
|||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct 1665 CACGAGCAGAGTATCCCACCTATGCCCT-ACTA-GAAGCTAGGTTCATGA 1712
> AT5G44390.1 | Symbols: | FAD-binding Berberine family protein
| chr5:17882196-17885004 REVERSE LENGTH=1860
Length=1860
Score = 1290 bits (698), Expect = 0.0
Identities = 1379/1699 (81%), Gaps = 81/1699 (5%)
Strand=Plus/Plus
Query 6 ATATTCGCTGCAAGGATGGGGATTTCAAAACCACACCCTACAATTTCTTGTAttt-tgtt 64
||||||||||| |||||||| | ||||||||||| |||||||||||||||||||| |||
Sbjct 84 ATATTCGCTGCTAGGATGGGAAATTCAAAACCACTCCCTACAATTTCTTGTATTTCAGTT 143
Query 65 tttagttttttATCTCTCATTATATTGC-ATAACACCAACTTCTTCATCAGCCTCCCTCC 123
||| | | | ||| | ||||| || | ||||||| |||||||||| | ||||||| |
Sbjct 144 TTT-GCTCTATATTTTTCATTCTA-CACAATAACACTAACTTCTTCA--A-CCTCCCTAC 198
Query 124 AAGATCAATTCAT-AAACTGTGTCAAAAGAAACACGCATGTTTC-TTTTCCACTCGAGAC 181
||||| | ||||| ||| ||| | | ||||||| ||| | | |||| ||||||| |
Sbjct 199 AAGATGATTTCATCAAA-TGTCTTTACCGAAACACAAATG-TCCGTTTTACACTCGACAA 256
Query 182 TACGTTATTTGCTCCTGCAAA-AAACGTC-TCTATGTTCAGC-CAAGTCCTTGAATCAAC 238
||||| || |||||| ||| ||||| | || || |||| | |||| |||||||| ||
Sbjct 257 AACGTTCTTCACTCCTG-AAAGAAACG-CTTCCATCTTCA-CAGAAGTTCTTGAATCGAC 313
Query 239 GGCTCAAAATCTCCAG-TTCTTG-GCAAAATCCTTGCCTAAACCGGGATTCATATTTAGG 296
|||||| |||| || | |||| ||| | | ||||||||||||| ||||||||||
Sbjct 314 GGCTCAGAATC-AAAGATACTTGACCAAGA-CAATGCCTAAACCGGGTTTCATATTTAAA 371
Query 297 CCAATTCACGAGTCTCAAGTCCAAGCTTCTATCATCTGTTCTAAGAAACTCGGA-ATTCA 355
|| ||||||| ||||| ||||||||||| |||||||||| |||||||| || || ||
Sbjct 372 CCGGTTCACGAATCTCACGTCCAAGCTTCCGTCATCTGTTCCAAGAAACT-TGAGATACA 430
Query 356 TTTTCGTGTTAGAAGTGGCGGTCACGATTTCGAGGCCTTGTCTTATGTCTCACGGATTGA 415
||||||||| ||||| |||||||| |||| ||||| | |||||||||| |||| ||| ||
Sbjct 431 TTTTCGTGTCAGAAGCGGCGGTCATGATTACGAGGGCGTGTCTTATGTTTCACAGATCGA 490
Query 416 AAAACCGTTTATATTAATCGATCTGTCGAAATTGAGACAAG-TCGATGTTGATATTGAA- 473
|||||| ||| |||| |||||| ||||||||||||||| || || ||||||||||| ||
Sbjct 491 AAAACCTTTTGTATTGATCGATTTGTCGAAATTGAGAC-AGATCAATGTTGATATT-AAG 548
Query 474 -ACCAATAGTGCTTGGGTTCAACCTGGTGCTA-CGCTTGGTGAGCTTTACTACAGAATTG 531
| || |||||||||||| || ||||||||| || ||||||||||||||||||||||||
Sbjct 549 GA-CACCAGTGCTTGGGTTGAAGCTGGTGCTACCG-TTGGTGAGCTTTACTACAGAATTG 606
Query 532 CAGAGAAGAGCAAAGTC-CATGGATTTCCC-GCGGGTTTGTGTAC--GAGCGTAGGCATA 587
||||||||||||| || |||||||| ||| || ||| | | ||| |||| |||||||
Sbjct 607 CAGAGAAGAGCAA-GTTTCATGGATT-CCCTGCAGGTGT-T-TACCCGAGCTTAGGCATC 662
Query 588 GGTGGGTATATGACAGGGGGTGGATACGGTTCCTTGATGAGGAAGTATGGTCTTGCGGGA 647
|||||| |||| ||||| |||| ||||||||||||||||||||||||||||||||| | |
Sbjct 663 GGTGGGCATATAACAGGCGGTGCATACGGTTCCTTGATGAGGAAGTATGGTCTTGCTGCA 722
Query 648 GATAATGTTCTAGACGTAAAGATGGTTGATGCAAATGGTAAATTACTCGACAGAACCGCG 707
|||||||||||||||| |||||| |||||||| || |||||||||||||| ||| || ||
Sbjct 723 GATAATGTTCTAGACGCAAAGATCGTTGATGCTAACGGTAAATTACTCGATAGAGCCTCG 782
Query 708 ATGGGTGAGGACCTATTTTGGGCGCTTAGAGGAGGCGGTGGAGCGAGTTTTGGGATAGTT 767
||||| ||||| || |||||||| ||||||||||| |||||| ||||||||||||| ||
Sbjct 783 ATGGGCGAGGATCTGTTTTGGGCAATTAGAGGAGGCAGTGGAGGGAGTTTTGGGATAATT 842
Query 768 CTCG-CATGGAAGATCAAGCTTGTTCCTGTTCCTGAGACCGTAACCATCTTCACCGTTAC 826
| | ||||||| ||||||||||||||||||||||| ||| ||||| ||||||| || ||
Sbjct 843 TT-GTCATGGAAAATCAAGCTTGTTCCTGTTCCTGAAACCCTAACCGTCTTCACGGTCAC 901
Query 827 CAAAACGTTAAAACAAGAC-GCAAGATTGAAGATTATTTCTAAGTGGCAACAAATTGCAT 885
|||||| || | ||||| | ||| || |||||| |||| ||||||||| |||||||
Sbjct 902 CAAAACATTCGAGCAAGATAG-AAGTTTCAAGATTCTTTCAAAGTGGCAAGAAATTGCGG 960
Query 886 CCAAGCTTGTCGAAGAGCTACA-CATCCGATTGGTACT-CAGAGCCGT-TGGAAATAATG 942
||| ||||| || ||||| | | | ||| || | || || | | |||||| || |
Sbjct 961 ACAATCTTGTTGATGAGCT-CTTCTTACGAGTGTT-CTTCACTGTA-TCTGGAAACAAAG 1017
Query 943 GAAACAAGACTATT-ACAATGTCCTATTTAGGTCAGTTTCTTGGCGAGAAAGGCACCTTG 1001
||||||||| | | || ||| |||| ||||||||||||||||||||||||||||||||
Sbjct 1018 CAAACAAGAC-AGTGACGATGGCCTACATAGGTCAGTTTCTTGGCGAGAAAGGCACCTTG 1076
Query 1002 ATGAAGGTTATGGAGAAGGATTTTCCAGAACTAGGGTTAACTCAAAAGGATTGTACCGAA 1061
||| |||| ||| ||||||||||||||||||| ||| ||||||| |||||||||| |||
Sbjct 1077 ATGGAGGTAATGAAGAAGGATTTTCCAGAACTTGGGCTAACTCAGAAGGATTGTATAGAA 1136
Query 1062 ATGAGCTGGATTGAATCCACCCTTTTCCA-TGGTGGATTTCCAACTGG---T--TC-TCC 1114
||||| ||||| || |||| ||| | | | |||||| ||||| | || |||
Sbjct 1137 ATGAGTTGGATCGATTCCATTATTTACAACTC-TGGATTCCCAACAAACCCTCCTCCTCC 1195
Query 1115 TATTGAAATTTTGCTTCAACGCAA-GTCGCCTTTAGGAAAAGATTACTTCAAAGC-AACG 1172
|||||| ||| |||||||| |||| ||| || | ||||||| ||||||||||| ||
Sbjct 1196 TATTGAGATTCTGCTTCAA-GCAAAGTCTCCAATCGGAAAAGTTTACTTCAAAGGGAAA- 1253
Query 1173 TCAGATTTCGTTAAAGAACCTATTCCTGTTTTAGGGCTCAAAGGAATTTTCAA-AAGATT 1231
|| ||||||| |||| ||||||||||||||||||||||| |||| || ||||| ||| ||
Sbjct 1254 TCGGATTTCGCTAAAAAACCTATTCCTGTTTTAGGGCTCGAAGGGATGTTCAAGAAG-TT 1312
Query 1232 GATTGAAGGAA-A-GATAGAATTTCTCAACT-GGACTCCCTACGGTGGTATGATGTCGAA 1288
| |||||| || | | || || | || | ||||||| |||||||| | |||| ||
Sbjct 1313 GCTTGAAG-AAGACGC-AGCGTTAGT-AATTTGGACTCCTTACGGTGGAAAGATGGATAA 1369
Query 1289 AATCTCTGAATCCGCGATCCCATTTCCTCACAGAAACGGAACCCTCTTCAAGATTCTCTA 1348
|||| ||||||| | |||||||||||| || |||||||||||| ||||| ||||| ||
Sbjct 1370 AATCCCTGAATCTGAGATCCCATTTCCGCATAGAAACGGAACCAACTTCATGATTCAATA 1429
Query 1349 TTAC-GCGAACTGG-CTAGAGAATGACAAGACATCGATGAGTAGAAAAATCAAATGGATC 1406
|||| | || |||| | ||| | ||| || | | | | | ||| | ||||||||||
Sbjct 1430 TTACAG-GAGCTGGTC-AGATAGTGAGAAAAGACCAA--AC-AGACGCACCAAATGGATC 1484
Query 1407 AAAGAGATATACAGTTACATGGCGCCTTATGTCTCAAGCAATCCAAGAGAAGCATATGTG 1466
| |||| | ||| | |||||| ||||||| |||||||||||||||||| |||||||||||
Sbjct 1485 AGAGAGTTGTACGGATACATGACGCCTTACGTCTCAAGCAATCCAAGACAAGCATATGTG 1544
Query 1467 AACTACAGAGATCTAGACTTCGGACAGAACGAGAACAACTCAAAGTTTAACTTCATCGAA 1526
|||||||||||||||||| | ||||||||| || |||||||||||| ||||||||| |||
Sbjct 1545 AACTACAGAGATCTAGACCTGGGACAGAACAAGGACAACTCAAAGTCTAACTTCATAGAA 1604
Query 1527 GCTAAAATCTGGGGAGCTAAGTACTTCAAAGACAATTTCAACAGATTGGTGAAGATTAAA 1586
|||||||| ||||||||||| || |||||||||||||||||||||||||||| |||||||
Sbjct 1605 GCTAAAATATGGGGAGCTAATTATTTCAAAGACAATTTCAACAGATTGGTGAGGATTAAA 1664
Query 1587 ACAAAGGTTGATCC-GAATAACTTCTTCAGGCACGAGCAGAGTATCCCACCTATGCCCTG 1645
||||||||||||| || |||||||||||| |||||||||||||||||| || ||||| |
Sbjct 1665 TCAAAGGTTGATCCAGA-TAACTTCTTCAGACACGAGCAGAGTATCCCAACTCTGCCC-G 1722
Query 1646 AACGAAGCTAGGTTCATGA 1664
| ||||||| | ||||||
Sbjct 1723 TATGAAGCTAAGCTCATGA 1741
> AT5G44400.1 | Symbols: | FAD-binding Berberine family protein
| chr5:17886194-17888480 REVERSE LENGTH=1930
Length=1930
Score = 1081 bits (585), Expect = 0.0
Identities = 1292/1625 (80%), Gaps = 82/1625 (5%)
Strand=Plus/Plus
Query 56 TAtttt-gtttttagttttttATCTCTCATTATATTGCATAACACCAACTTCTTCATCAG 114
|||||| | ||||||| | ||| | ||| | || ||| |||||||||||||||| ||
Sbjct 171 TATTTTCGATTTTAGTCCTCTATTTTTCACTCTACACCATTACACCAACTTCTTCATTAG 230
Query 115 CCTCCCTCCAAGATCAATTCATAAACTGTGTCAAAAGAAACACGCATGTTT-CTTTTCCA 173
|||||||||||||||||||||| ||||||||| |||||||||| ||||||| | || |||
Sbjct 231 CCTCCCTCCAAGATCAATTCATCAACTGTGTCCAAAGAAACACACATGTTTAC-TTCCCA 289
Query 174 CTCGAGACTACGTTATTTGCTCCTGCAAAAAACGTCTCTATGTTCAGCCAAGTCCTTGAA 233
|| |||| ||||| ||||||||| ||||||| |||||||||||||||||||| ||||||
Sbjct 290 CTTGAGAAAACGTTCTTTGCTCCTACAAAAAATGTCTCTATGTTCAGCCAAGTTCTTGAA 349
Query 234 TCAACGGCTCAAAATCTCCAGTTCTTGGCAAAATCCTTGCCTAAACCGGGATTCATATTT 293
|| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||
Sbjct 350 TCGACGGCTCAAAATCTCCGGTTCTTGAAAAAATCCATGCCTAAACCGGGATTCATATTC 409
Query 294 AGGCCAATTCACGAGTCTCAAGTCCAAGCTTCTATCATCTGTTCTAAGAAACTCGGAATT 353
|| || |||||||||||||| || |||||||| ||||| ||||| ||||||||| ||||
Sbjct 410 AGCCCTATTCACGAGTCTCACGTACAAGCTTCCATCATTTGTTCCAAGAAACTCCGAATG 469
Query 354 CATTTTCGTGTTAGAAGTGGCGGTCACGATTTCG-AGGCCTTGTCTTATGTCTCACGGAT 412
||| | ||||| ||||| ||||||||||| | || ||| ||||||||||||||| | |||
Sbjct 470 CATCTCCGTGTCAGAAGCGGCGGTCACGACTACGAAGG-CTTGTCTTATGTCTCTCAGAT 528
Query 413 TGAAAAACCGTTTATATTAATCGATCTGTCGAAA-TTGAGACAAGTCGATGTTGATATTG 471
|| |||||||||||||| || |||||||| ||| ||||||| ||| | || |||||
Sbjct 529 CGATAAACCGTTTATATTGATGGATCTGTC-AAAGATGAGACAGGTCAACATTAATATTC 587
Query 472 AA-ACCAATAGTGCTTGGGTTCAACCTGGTGCTAC-GCTTGGTGAGCTTTACTACAGAAT 529
|| | ||| ||||||||||||||| ||||||| || | ||||||| ||||| ||||| ||
Sbjct 588 AAGA-CAACAGTGCTTGGGTTCAATCTGGTGCCACTG-TTGGTGAACTTTATTACAGGAT 645
Query 530 TGCAGAGAAGAGCAAAGTCCATGGATTTCCC-GCGGGTTTGTG-TACGAGCGTAGGCATA 587
||| |||||||||||||||||||| ||||| ||||||||||| | ||||| ||||||||
Sbjct 646 TGCGGAGAAGAGCAAAGTCCATGG-GTTCCCGGCGGGTTTGTGCT-CGAGCTTAGGCATA 703
Query 588 GGTGGGTATATGACAGGGGGTG-GATACGGTTCCTTGATGAGGAAGTATGGTCTTGCG-G 645
|| || | || ||||| |||| | ||||||||| ||||| |||| |||||||| | | |
Sbjct 704 GGAGGACACATAACAGGCGGTGCG-TACGGTTCCATGATGCGGAAATATGGTCTAG-GTG 761
Query 646 GAGATAATGTTCTAGACGTAAAGATGGTTGATGCAAATGGTAAATTACTCGACAGAACCG 705
||| ||||||||||||| |||||| |||||||| || |||||||||||||| ||| |||
Sbjct 762 CAGACAATGTTCTAGACGCAAAGATTGTTGATGCCAACGGTAAATTACTCGATAGAGCCG 821
Query 706 CGATGGGTGAGGA-CCTATTTTGGGCGCTTAGAGGAGGCGGTGGAGCGAGTTTTGGGATA 764
||||||||||||| | ||||||||| |||||||||||| ||||| |||||||||||||
Sbjct 822 CGATGGGTGAGGATAC-ATTTTGGGCTATTAGAGGAGGCGCTGGAGGGAGTTTTGGGATA 880
Query 765 GTTCTCGCATGGAAGATCAAGCTTGTTCCTGTTCCTGAGACCGTAACCATCTTCACCGTT 824
|||| |||||||||||||||||||||||||||||| ||||||| ||| |||| |||||
Sbjct 881 ATTCTAGCATGGAAGATCAAGCTTGTTCCTGTTCCTAAGACCGTGACCGTCTTTACCGTC 940
Query 825 ACCAAAACGTTAAAACAAGACGCAAG-ATTGAAGATTATTTCTAAGTGGCAACAAA-TTG 882
|||||||||||| ||||||||| | | |||||||| || ||||||||| | | |||
Sbjct 941 ACCAAAACGTTACAACAAGACGTGGGTAAC-AAGATTATCTCAAAGTGGCAA-AGAGTTG 998
Query 883 CATCCAAGCTTGTCGAAGAGCTACACATCCGATTGGTACT-CAGA-GCCGTTGGAAATAA 940
| ||||||||| ||||||||| |||| || || | || || | | | |||||
Sbjct 999 CGGACAAGCTTGTTGAAGAGCTATTCATCAGAGTGCT-CTTCA-ACGTAGCTGGAACCGG 1056
Query 941 TGGAAACAAGACTATTACAATGTCCTATTTAGG-TCAGTTTCTTGGCGAGAAAGGCAC-C 998
||| ||||||||| | || | ||| || | | || ||||||||||| |||||| || |
Sbjct 1057 TGGGAACAAGACTGTGACGACGTCGTACA-ATGCTCTGTTTCTTGGCGGGAAAGGAACGC 1115
Query 999 TTGATGAAGGTTATGGAGAAGGATTTTCCA-GAACTAGGGTTAAC-TCAAAAGGATTGTA 1056
| |||||| |||||| ||||| | ||||| || |||||| |||| | |||| ||||||
Sbjct 1116 T-GATGAACGTTATGAAGAAG-AGTTTCCCCGAGCTAGGGCTAACATTTAAAG-ATTGTA 1172
Query 1057 CCGAAATGAGCTGGATTGAATCCACC-CTTTTCCATGG-TGGATTTCCAACTGGTTCTCC 1114
||||||||||||| ||||||||| ||| | || |||||| || || | ||
Sbjct 1173 TCGAAATGAGCTGGCTTGAATCCATTGCTTA-C-ATTTCTGGATTCCCGACCCACACGCC 1230
Query 1115 TATTGAAA-TTTTGCTTCAACGCAAGTCGCCTTTAGGAAAAGATTA-CTTCAAAGC-AAC 1171
|| | || ||||||||||| | ||||| || || ||| | | | ||||||||| ||
Sbjct 1231 TACT-AATGTTTTGCTTCAAGGGAAGTCTCCGTTCCCAAAGG-TCAGCTTCAAAGCCAAA 1288
Query 1172 GTCAGATTTCGTTAAAGAACCT-ATTCCTGTTTTAGGGCT-CAAAGGAATTTTCAA-AAG 1228
|| |||||||| ||| | || ||||| | | ||||| ||| ||| | ||||| |||
Sbjct 1289 -TCGGATTTCGTGAAA-ACCCCGATTCCCGAATCCGGGCTTCAAGGGA-TCTTCAAGAAG 1345
Query 1229 ATTGATTGAAGGAAAGATAGA--ATTTCTCA-ACTGGACTCCCTACGGTGGTATGATGTC 1285
| || ||| || |||| ||| | | | |||| ||| ||||| || |||||| |
Sbjct 1346 CTAC-TTAAAG-AA-GATATTCCATTGATGATA-TGGAATCCTTACGGAGGAATGATGGC 1401
Query 1286 GAAAATCTCTGAATCCGCGA-TCCCATTTCCTCA-CAGAAACGGAACCCTCTTCAAGATT 1343
||||||| | |||||| | | |||| ||||| || | |||| ||| |||||||||| ||
Sbjct 1402 GAAAATCCCCGAATCC-CAAATCCCTTTTCCGCATC-GAAAAGGAGTCCTCTTCAAGGTT 1459
Query 1344 CTCTAT-TACGCGAACT-GGCTAGAGAATGACAAGACATCGATGAGTAGAAAAATCAAAT 1401
| || || | || | ||||||| | |||||||| | ||| | ||| | ||||| |
Sbjct 1460 CAGTACGTAA-C-AAGTTGGCTAGACAGTGACAAGAGACCGA-GC--AGACACATCAACT 1514
Query 1402 GGATCAAAGAGATATACAGTTACATGGCGCCTTATGTCTCAAGCAATCCAAGAGAAGCAT 1461
|||||| ||| | || ||||||||| |||||||||||||||| || ||| ||||||| |
Sbjct 1515 GGATCAGAGATCTCTATAGTTACATGACGCCTTATGTCTCAAGTAACCCACGAGAAGCTT 1574
Query 1462 ATGTGAACTACAGAGATCTAGACTTCGGACAG-AACGA-GAACA-AC-TCAAAGTTTAAC 1517
| ||||||||| | ||| ||||| | ||| || ||| | ||| | || | ||| | |
Sbjct 1575 ACGTGAACTACCGTGATTTAGACCTGGGA-AGGAAC-ACGAA-AGACGTGAAAACATG-C 1630
Query 1518 TTCAT-CGAAGCTAAAATCTGGGGAGCTAAGTACTTCAAAGACAATTTCAACAGATTGGT 1576
||| | ||||| || ||||||||||||| ||||||||| ||||||||||||||||| |
Sbjct 1631 ATCAAAC-AAGCTCAAGTCTGGGGAGCTAACTACTTCAAAAACAATTTCAACAGATTGAT 1689
Query 1577 GAAGATTAAAACAAAGGTTGATCC-GAATAACTTCTTCAGGCACGAGCAGAGTATCCCAC 1635
|| ||||||| ||||||||||||| || |||||||| || ||||||||||| || ||||
Sbjct 1690 GATGATTAAAGCAAAGGTTGATCCAGAG-AACTTCTTTAGACACGAGCAGAGCATTCCAC 1748
Query 1636 CTATG 1640
|||||
Sbjct 1749 CTATG 1753
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82328893800
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5