BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg948815
Length=1141
Score E
Sequences producing significant alignments: (Bits) Value
AT5G43440.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 1677 0.0
AT5G43450.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 1208 0.0
AT1G03410.1 | Symbols: 2A6 | 2-oxoglutarate (2OG) and Fe(II)-de... 171 2e-41
> AT5G43440.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr5:17455233-17456657
REVERSE LENGTH=1270
Length=1270
Score = 1677 bits (908), Expect = 0.0
Identities = 1060/1135 (93%), Gaps = 4/1135 (0%)
Strand=Plus/Plus
Query 9 AAAAAATAGAACATCATGACAGAAAAATCCGGAGAAATCGGTCGTTTGAACGAGCTCAAG 68
|||||| | |||||||||||||||||||| | |||| ||| |||||||||||| ||||||
Sbjct 35 AAAAAACAAAACATCATGACAGAAAAATCTGCAGAACTCGTTCGTTTGAACGAACTCAAG 94
Query 69 GCTTTTGTCTCGTCGAAAA-CAGGAGTCAAAGGACTCGTCGATACCAAAATAACCGAAGT 127
|||||||| ||| | |||| |||| || |||||||| |||||||||||||||||||||||
Sbjct 95 GCTTTTGTATCGAC-AAAAGCAGGTGTGAAAGGACTTGTCGATACCAAAATAACCGAAGT 153
Query 128 TCCTCGAATCTTTCATGTCCCTTCTTCTACTACTATATCTAACAACAAACCTTCTGATAT 187
|||||||||||| ||| ||||||||||| | ||| |||||||||||||||||||||||||
Sbjct 154 TCCTCGAATCTTCCATATCCCTTCTTCTTCAACTTTATCTAACAACAAACCTTCTGATAT 213
Query 188 CTCCAGCTTAAACCTCACTGTCCCAATCATCGACCTCGGAGATGGCAACATATCTTCTAC 247
|| ||||||||||||||||||||||||| |||||||||||||| |||| |||| || |
Sbjct 214 CTTTGGCTTAAACCTCACTGTCCCAATCATTGACCTCGGAGATGGTAACACATCTGCTGC 273
Query 248 AAGAAACGTTCTCGTTTCGAAGATTAAAGAAGCAGCTGAGAATTGGGGATTTTTCCAAGT 307
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 274 AAGAAACGTCCTCGTTTCCAAGATTAAAGAAGCAGCTGAGAATTGGGGATTTTTCCAAGT 333
Query 308 GATCAATCATGGTATACCTTTGACTATTCTTGAAGAGATTAAACAAGGAGTTCGAAGATT 367
|||||||||||||| ||||| ||| ||||| |||| || |||||||| |||||||||||
Sbjct 334 AATCAATCATGGTATTCCTTTAACTGTTCTTAAAGATATCAAACAAGGTGTTCGAAGATT 393
Query 368 TCATGAAGAAGATCCAGAGATCAAGAAACAGTATTTTGCTAAAGATTTCAATAAAAGATT 427
|||||| |||||||||||| ||||||||||||||||||||| ||||||||||| ||||||
Sbjct 394 TCATGAGGAAGATCCAGAGGTCAAGAAACAGTATTTTGCTACAGATTTCAATACAAGATT 453
Query 428 TGCTTACAACACCAACTTCGATATTTATCATTCTTCTCCTATGAATTGGAGAGACTCTTT 487
||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||
Sbjct 454 TGCTTACAACACCAACTTCGATATTCATTATTCTTCTCCTATGAATTGGAAAGACTCTTT 513
Query 488 CACTTGTTACACTTGTGTTCAAGATCCTCTAAAGCCAGAGGAAATCCCACTAGCTTGCAG 547
|||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 514 CACTTGCTACACTTGTCCTCAAGATCCTCTAAAGCCAGAGGAAATCCCACTAGCTTGCAG 573
Query 548 GGATGTTGTGATTGAATACTCGAAGCATGTAATGGAATTAGGAGGTTTACTCTTCCAACT 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 574 GGATGTTGTGATTGAATACTCGAAGCATGTAATGGAATTAGGAGGTTTACTCTTCCAACT 633
Query 608 TCTCTCAGAAGCTTTAGGTTTAGACTCTGAGATCCTTAAGAACATGGATTGTCTCAAGGG 667
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 634 TCTCTCAGAAGCTTTAGGTTTAGACTCTGAGATTCTTAAGAACATGGATTGTCTCAAGGG 693
Query 668 TTTGCTTATGCTCTGCCATTACTATCCACCTTGCCCTCAGCCTGACCTAACTTTGGGCAT 727
||||||||||||||||||||| ||||||||||| || || ||||||||||||||||||||
Sbjct 694 TTTGCTTATGCTCTGCCATTATTATCCACCTTGTCCACAACCTGACCTAACTTTGGGCAT 753
Query 728 AAGTAAACACACCGACAACTCTTTCATAACAATTCTTCTTCAAGACCAAATCGGTGGTCT 787
|||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||
Sbjct 754 AAGTAAACACACCGACAATTCCTTCATAACAATTCTTCTTCAAGATCAAATCGGTGGTCT 813
Query 788 TCAAGTTCTTCATCAAGATTCTTGGGTAGATGTAACTCCTGTTCCTGGAGCTCTTGTCAT 847
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 814 TCAAGTTCTTCATCAAGATTCTTGGGTTGATGTAACTCCTGTTCCTGGAGCTCTTGTCAT 873
Query 848 CAGCATCGGTGATTTCATGCAGCTGATCACGAACGATAAGTTCTTAAGCGTGGAGCATAG 907
||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 874 CAGTATCGGTGATTTCATGCAGCTGATCACAAACGATAAGTTCTTAAGTATGGAGCATAG 933
Query 908 GGTACGTGCAAACAGAGAAGGACCGCGGATTTCAGTTGCGTGCTTTGTTAGCTCGGGAGT 967
|||||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||
Sbjct 934 GGTACGGGCAAACAGAGATGGACCGCGGATTTCAGTTGCTTGCTTCGTTAGCTCGGGAGT 993
Query 968 GTTTCCAAATTCCACGGTTTATGGACCGATAAAAGAGCTTATTTCTGATGAAAACCCTGC 1027
||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct 994 GTTTCCAAATTCCACTGTTTATGGACCGATAAAAGAGCTTCTTTCTGATGAAAACCCTGC 1053
Query 1028 AAAGTACAGAGACATCACTATACCAGAATACACTGTAGGATACCTTGCG-GACATCTTTG 1086
||||||||||||||||||||||||||||||||||||||||||||| || | |||||| |
Sbjct 1054 AAAGTACAGAGACATCACTATACCAGAATACACTGTAGGATACCTAGCAAG-CATCTTCG 1112
Query 1087 ATGGAAAATCGCATTTGTCTAAGTTCAGGATATGAAGAAAAGACTTGTCTGGCTT 1141
|||||||||||||||||||||||||| ||||||||||||| |||||| ||||||
Sbjct 1113 ATGGAAAATCGCATTTGTCTAAGTTCCGGATATGAAGAAATTACTTGTATGGCTT 1167
> AT5G43450.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr5:17457125-17458797
REVERSE LENGTH=1368
Length=1368
Score = 1208 bits (654), Expect = 0.0
Identities = 983/1139 (86%), Gaps = 33/1139 (3%)
Strand=Plus/Plus
Query 9 AAAAAATAGAACATCATGACAGAAAAATCCGGAGAAATCGGTCGTTTGAACGAGCTCAAG 68
|||||| | || | ||||||||| || || | | |||||| |||||| ||||| |||| |
Sbjct 69 AAAAAAGAAAAAAACATGACAGAGAATTCTGAAAAAATCGATCGTTTAAACGATCTCACG 128
Query 69 GCTTTTGTCTCGTCGAAAACAGGAGTCAAAGGACTCGTCGATACCAAAATAACCGAAGTT 128
||||| ||||| |||| |||||||| ||||||||||||||| || ||||||||||||||
Sbjct 129 ACTTTTATCTCGACGAAGACAGGAGTGAAAGGACTCGTCGATGCCGAAATAACCGAAGTT 188
Query 129 CCTCGAATCTTTCATGTCCCTTCTTCTACTACTATATCTAACAACAAACCTTCTGATATC 188
||| | || ||||||||||||||||||| | | |||| ||||||| |||||||||||||
Sbjct 189 CCTAGCATGTTTCATGTCCCTTCTTCTA-T--TTTATCAAACAACAGACCTTCTGATATC 245
Query 189 TCCAGCTTAAACCTCACTGTCCCAATCATCGACCTCGGAGATGGCAACATATCTTCTACA 248
||| ||||||||||||| |||||||||||||||||||||||| | |||| ||| | | ||
Sbjct 246 TCCGGCTTAAACCTCACCGTCCCAATCATCGACCTCGGAGATCGTAACACATC-T-T-CA 302
Query 249 AGAAACGTTCTCGTTTCGAAGATTAAAGAAGCAGCTGAGAATTGGGGATTTTTCCAAGTG 308
||||||||| || |||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 303 AGAAACGTTGTCATTTCGAAGATCAAAGACGCAGCTGAGAATTGGGGATTTTTCCAAGTG 362
Query 309 ATCAATCATGGTATACCTTTGACTATTCTTGAAGAGATTAAACAAG-GAGTTCGAAGATT 367
|||||||||| | | ||||| ||| ||||||||||||| ||| || | |||||||| ||
Sbjct 363 ATCAATCATGATGTTCCTTTAACTGTTCTTGAAGAGATCAAA-GAGAGTGTTCGAAGGTT 421
Query 368 TCATGAAGAAGATCCAG-AGATCAAGAAACAGTATTTTGCTAAAGATTTCAATAAAAGAT 426
||||||| ||||||||| | ||||||| || ||| || ||| ||| ||| || ||||
Sbjct 422 TCATGAACAAGATCCAGTTG-TCAAGAACCAATATCTTCCTACCGATAACAACAAGAGAT 480
Query 427 TTGCTTACAACACCAACTTCGATATTTATCATTCTTCTCCTATGAATTGGAGAGACTCTT 486
||| ||| |||| | |||||| | ||||||||||||||| ||||||||||||||||||
Sbjct 481 TTGTTTATAACAATGATTTCGATCTCTATCATTCTTCTCCTTTGAATTGGAGAGACTCTT 540
Query 487 TCACTTGTTACACTTGTGTTCAAGATCCTCTAAAGCCAGAGGAAATCCCACTAGCTTGCA 546
|||||||||| | | || || |||||||| || |||||||||||||||||||||||||
Sbjct 541 TCACTTGTTATA--T-TGCTCCAGATCCTCCGAATCCAGAGGAAATCCCACTAGCTTGCA 597
Query 547 GGGA-TGTTGTGATTGAATACTCGAAGCATGTAATGGAATTAGGAGGTTTACTCTTCCAA 605
||| || ||||| |||||| |||||||||||||||||||||||| | | |||||||||
Sbjct 598 -GGAGTGCGGTGATCGAATACACGAAGCATGTAATGGAATTAGGAGCTGTGCTCTTCCAA 656
Query 606 CTTCTCTCAGAAGCTTTAGGTTTAGACTCTGAGATC-CTTAAGAACATGGATTGTCTCAA 664
|||||||||||||||||||||||||||||||||| | ||||||| || |||||||| ||
Sbjct 657 CTTCTCTCAGAAGCTTTAGGTTTAGACTCTGAGA-CACTTAAGAGGATTGATTGTCTTAA 715
Query 665 GGGTTTGCTTATGCTCTGCCATTACTATCCACCTTGCCCTCAGCCTGACCTAACTTTGGG 724
||||||| ||||||||||||||||||||||||||||||| || |||||||||||||| ||
Sbjct 716 GGGTTTGTTTATGCTCTGCCATTACTATCCACCTTGCCCACAACCTGACCTAACTTTAGG 775
Query 725 CATAAGTAAACACACCGACAACTCTTTCATAACAATTCTTCTTCAAGACCAAATCGGTGG 784
||||||||||||||||||||||||||| | || |||||||||||||||||||||||||
Sbjct 776 TATAAGTAAACACACCGACAACTCTTTCCTCACGCTTCTTCTTCAAGACCAAATCGGTGG 835
Query 785 TCTTCAAGTTCTTCATCAAGATTCTTGGGTAGATGTAACTCCTGTTCCTGGAGCTCTTGT 844
|||||||||||||||| |||||| |||||| ||||| ||||||| ||||||||||||||
Sbjct 836 TCTTCAAGTTCTTCATGAAGATTATTGGGTCGATGTCCCTCCTGTACCTGGAGCTCTTGT 895
Query 845 CATCAGCATCGGTGATTTCATGCAGCTGATCACGAACGATAAGTTCTTAAGCGTGGAGCA 904
||| ||| |||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 896 TGTCAACATTGGTGATTTCATGCAGCTGATAACGAACGATAAGTTCTTGAGCGTGGAGCA 955
Query 905 TAGGGTACGTGCAAACAGAGA-AGGACCGCGGATTTCAGTTGCGTGCTT-TGTTAGCTCG 962
||||||||| | |||| ||| || |||||||||||||||||||||||| | ||||||||
Sbjct 956 TAGGGTACGACCGAACAAAGATAG-ACCGCGGATTTCAGTTGCGTGCTTCT-TTAGCTCG 1013
Query 963 GGAGTGTTTC-C-AAATTCCACGGTTTATGGACCGATAAAAGAGCTTATT-TCTGATGAA 1019
||| |||| | |||||||||||||||||||||||| ||||| ||| || |||||||||
Sbjct 1014 --AGTCTTTCTCCAAATTCCACGGTTTATGGACCGATTAAAGATCTT-TTGTCTGATGAA 1070
Query 1020 AACCCTGCAAAGTACAGAGACATCACTATACCAGAATACACTGTAGGATACCTTGCG-GA 1078
|||||||| ||||||| ||| ||||| |||||||| ||||||| ||||| |||||| |
Sbjct 1071 AACCCTGCTAAGTACAAAGATATCACCATACCAGAGTACACTGCAGGATTTCTTGCGAG- 1129
Query 1079 CATCTTTGATGGAAAA-TCGCATTTGTCTAAGTT-CAGGATATGAAGAAAAGACTTGTC 1135
||| ||||||| |||| ||| ||||| |||| || || ||||||||||||| |||||||
Sbjct 1130 CATTTTTGATG-AAAAGTCGTATTTGACTAA-TTACATGATATGAAGAAAATACTTGTC 1186
> AT1G03410.1 | Symbols: 2A6 | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr1:844436-847683
REVERSE LENGTH=2652
Length=2652
Score = 171 bits (92), Expect = 2e-41
Identities = 388/524 (74%), Gaps = 47/524 (9%)
Strand=Plus/Plus
Query 542 TTGCAGGGATG-TTGTGATTGAATACTCGAAGCATGTAATGGA-ATTAGGAG-GTTTACT 598
|||| |||| | || |||| || ||||| ||||| |||| || ||||| | ||| ||
Sbjct 1727 TTGCGGGGA-GATTATGATGGAGTACTCAAAGCAACTAAT-GACTTTAGGTGAATTT-CT 1783
Query 599 CTTCCAACTTCTCTCAGAAGCTTTAGGTTTAGACTCTGAGAT--CCTTAAGAACATGGAT 656
||| | ||||| || || ||||| || ||| || || | || ||| ||| ||||||
Sbjct 1784 CTTTGAGCTTCTATCTGAGGCTTTGGGATTAAACCCT-A-ATCACCTCAAGGACATGGGC 1841
Query 657 TGT-CTCAAGGGTTTGC-T-T-ATGCTCT-GCCATTACTATCCACCTTGCCCTCAGCCTG 711
||| | ||| || | | | | ||| | | |||| |||||||||||||||||||||||||
Sbjct 1842 TGTGC-CAA--GTCT-CATATCATG-TTTGGCCAATACTATCCACCTTGCCCTCAGCCTG 1896
Query 712 ACCTAACTTTGGGCATAAGTAAACACACCGACAACTC-TTTCATAACAATTCTTCTTCAA 770
|||| ||||| |||||||| || |||||||| ||| ||| || || |||||||||||
Sbjct 1897 ACCTTACTTTAGGCATAAGCAAGCACACCGATTTCTCGTTT-ATCACCATTCTTCTTCAG 1955
Query 771 GACCAA-ATCGGTGGTCTTCAAGTTCTTCATCAAGATT-CTTGGGTAGATGTAACTCCTG 828
||| || ||||| || ||||||||| | ||| | | | || |||| ||||| ||||||
Sbjct 1956 GAC-AATATCGGAGGGCTTCAAGTTATCCATGACCAATGCT-GGGTTGATGTTTCTCCTG 2013
Query 829 TTCCTGGAGCTCTTGTCATCAGCATCGGTGAT-TTCATGCAGCTGATCA-CGAACGATAA 886
| ||||| || |||||||| | |||||| ||| ||| | ||||| || | | || || ||
Sbjct 2014 TCCCTGGCGCCCTTGTCATTAACATCGGAGATCTTC-TCCAGCTTATAAGC-AATGACAA 2071
Query 887 GTTC-TTAAGCGTGGAGCATAGGGT-ACGTGCAAACAGAGAAG--GA-CCGCGGATTTCA 941
||| ||| ||| |||||||||||| | ||||| || || ||||||||||||
Sbjct 2072 ATTCATTA-GCGCGGAGCATAGGGTGATA-GCAAATGGATCTTCTGAACCGCGGATTTCA 2129
Query 942 GTTGCG-TGCTTT-GTTAGCTCGGG-AGTGTTTCCAAATTCCACGGTT-TATGGACCGAT 997
| || || ||| || ||| || | || || ||| ||||| | |||||||| ||
Sbjct 2130 AT-GCCATG-TTTCGTCAGCACGTTCA-TGAAGCCGAAT-CCACGAATATATGGACCCAT 2185
Query 998 AAAAGAGCTTATT-TCTGATGAAAACCCTGCAAAGTACAGAGAC 1040
||||| ||| || || || |||||||||| ||||| ||||||
Sbjct 2186 CAAAGAACTT-TTGTCAGAACAAAACCCTGCCAAGTATAGAGAC 2228
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 55973607675
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5