BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg948830
Length=2014
Score E
Sequences producing significant alignments: (Bits) Value
AT5G43400.1 | Symbols: | Uncharacterised conserved protein UCP... 3016 0.0
AT5G43390.1 | Symbols: | Uncharacterised conserved protein UCP... 2124 0.0
AT3G24780.1 | Symbols: | Uncharacterised conserved protein UCP... 100 4e-20
> AT5G43400.1 | Symbols: | Uncharacterised conserved protein UCP015417,
vWA | chr5:17425944-17428223 REVERSE LENGTH=2280
Length=2280
Score = 3016 bits (1633), Expect = 0.0
Identities = 1895/2021 (94%), Gaps = 19/2021 (1%)
Strand=Plus/Plus
Query 1 ATCGC-TCTTCCTCTGTTTCAATGGCTTCTTCCACGACGACCCTTCTTGGCCCACCTTCC 59
||||| | ||||||||||||||||||||||||||| |||| ||||||||| |||||||||
Sbjct 54 ATCGCATTTTCCTCTGTTTCAATGGCTTCTTCCACTACGATCCTTCTTGGTCCACCTTCC 113
Query 60 GTCACCGGCGATTCACAGATCTTGAAACCAGTCACCATCCATTCACCGGAAACCCCA-GT 118
||| |||| |||||| |||| | ||| | || |||||||||||||||| |||| |
Sbjct 114 GTCGCCGGAAATTCACCGATCATCAAA-C---CA--ATCCATTCACCGGAAA-CCCATAT 166
Query 119 TTCCGATGAAAACAGTTTAATCTCCCAAACCGCCACACTAAACCTTGAAGAACCACCACC 178
|||||||||||||| | |||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 167 TTCCGATGAAAACACTCTAATCTCCCAAACCGCTACACTAAACCTCGAAGAACCACCACC 226
Query 179 AATGGGTCTAACTGAAAACTTCTCGCCGACGTTTCTTTCCTCCGGGAACCCATGTCTCGA 238
|||||||||||| || || ||||||||||| ||||| |||||||||||||||||||||||
Sbjct 227 AATGGGTCTAACGGAGAATTTCTCGCCGACATTTCTCTCCTCCGGGAACCCATGTCTCGA 286
Query 239 TTTCTTCTTCCACATCGTCCCCGATACATCTCCCGATGATCTGATCAAAAGGTTAGCTAT 298
|||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||| ||
Sbjct 287 TTTCTTCTTCCACATCGTCCCCGACACATCTCCCGATGATCTGATCCAAAGGCTAGCAAT 346
Query 299 TTCTTGGTCTCACGATCCTTTGACTACGTTGAAACTTGTATGCAATCTCAGAGGAGTTAG 358
|||||||||||||||||| |||||||||||||| ||| | |||||||||||||| |||||
Sbjct 347 TTCTTGGTCTCACGATCCGTTGACTACGTTGAAGCTTATCTGCAATCTCAGAGGTGTTAG 406
Query 359 AGGAACTGGGAAATCAGACAAAGAAGGGTTTTACACAGCTGCGTTTTGGCTTTTCAAGAA 418
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 407 AGGAACTGGGAAATCAGACAAAGAAGGGTTTTACACAGCTGCTTTTTGGCTTTACAAGAA 466
Query 419 TCATCCAAAGACCCTAGCTTTGAATGTCCCTGCTCTTGTTGATTTTGGGTATTTCAAAGA 478
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 467 TCATCCAAAAACCCTAGCTTTGAATGTCCCTGCTCTCGTTGATTTTGGGTATTTCAAAGA 526
Query 479 TTTGCCTGAGATTCTGTTTCGGATCTTGGAAGGTCAGCAGATGGAGAGAGGGAAGAGTCG 538
| ||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||
Sbjct 527 TCTGCCTGAGATTCTGTTTCGGATCTTGGAAGGTCAGAATATGGAGAGAGGGAAGAATCG 586
Query 539 GGTTTGGAGGAAGAGGGTTCAAAGGAAATTCAAAGGGAAGAGTGAGAAAAGGGAC-GAGA 597
|||||||||||||||||||||||||||||||||||||||||| ||||||| | | ||||
Sbjct 587 GGTTTGGAGGAAGAGGGTTCAAAGGAAATTCAAAGGGAAGAGAGAGAAAA-AGTCTGAGA 645
Query 598 TTTCCGGTGACATGGAAGATCGGATTCTGGAAAATGTAGAGGAGATTGGTGGTTCTGTTG 657
|||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 646 TTTCCGGTGAAATGGAAGATCGGATTCTGGAAAATGCGGAGGAGATTGGTGGTTCTGTTG 705
Query 658 ATAAGGTAAAGGCTAGGGGTTTACGGAAACAGAGAGAGTTCGAAAAGGCGAAAAAGGCGC 717
|||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||
Sbjct 706 ATAAGGTAAAGGCTAGAGCTTTAAGGAAACAGAGAGAGTTCGAAAAGGCGAAAAAGGCGG 765
Query 718 TAGA-GAGGTTTAACTCTGATGCTAATTATAGATTACTGTTTGATCGAATTGCGGATTTG 776
|| | ||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct 766 TA-ACGAGGTATAACTCTGATGCTAATTACAGATTACTGTTTGATAGAATTGCGGATTTG 824
Query 777 TTTGCGGTTATGTTGAAATCGGATTTGAAGTGTTTGAATTCGAATGAGTTGAATAAGATT 836
||||||||| ||||||||||||||||||||| |||||||||||||| ||||| |||||||
Sbjct 825 TTTGCGGTTTTGTTGAAATCGGATTTGAAGTATTTGAATTCGAATGGGTTGACTAAGATT 884
Query 837 GGTTTAGCTTCGAAGTGGTGTCCTTCTGTTGATTCTTCGTATGATAAGACTACTTTGATA 896
||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 885 AGTTTAGCTTCGAAATGGTGTCCTTCGGTTGATTCTTCGTATGATAAGGCTACTTTGATA 944
Query 897 TGTGAGGCAATTGCTAGAAGGATGTTCCCTAGAGAGGAATACAAAGATATAGAAGAGGCG 956
|||||||||||||||||||||||||| ||||||||||| || ||| ||| ||||| |||
Sbjct 945 TGTGAGGCAATTGCTAGAAGGATGTTTCCTAGAGAGGAGTATGAAGGTATCGAAGAAGCG 1004
Query 957 CATTATGCGTATAGGATTAGAGATAGGTTGAGGAAAGAAGTTCTTGTGCCGTTGCATAAA 1016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1005 CATTATGCGTATAGGATTAGAGATAGGTTGAGGAAAGAAGTTCTTGTGCCGTTGCATAAA 1064
Query 1017 GCGCTTGAGTTTCCGGAGTTGTTCATGAGTGCAAAGGAATGGAATTTGTTGAAGTATAAT 1076
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1065 GCGCTTGAGTTTCCGGAGTTGTTCATGAGTGCTAAGGAATGGAATTTGTTGAAGTATAAT 1124
Query 1077 AGAGTTCCTTCTGTGGCTATGAAGAATTACAAGAAGCTGTTTGAGGAACATGATAGCGAG 1136
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1125 AGAGTTCCTTCTGTTGCTATGAAGAATTACAAGAAGCTGTTTGAGGAACATGATAGCGAG 1184
Query 1137 AGGTTTTCAC-AGTTTTTGGAGGATGTGAAGTCTGGGAAGAAGAAGATTGCGGCTGGTGC 1195
|||||| | | |||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 1185 AGGTTTAC-CGAGTTTTTGGAGGATGTGAAGTCCGGAAAGAAGAAGATTGCGGCTGGTGC 1243
Query 1196 GTTGCTTCCTCATCAGATAATCAAGCAGCTGGAGGATGAGAGTGGGAGTGAAGTTGGCGC 1255
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||
Sbjct 1244 GTTGCTTCCTCATCAGATAATCAACCAGCTGGAGGATGATAGTGGGAGTGAAGTTGGTGC 1303
Query 1256 GGAAGTTGCAGAGCTTCAATGGGCGAGAATGGTTGATGATCTTGCTAAGAAAGGGAAGCT 1315
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1304 GGAAGTTGCAGAACTTCAATGGGCGAGAATGGTTGATGATCTTGCTAAGAAAGGGAAGCT 1363
Query 1316 GAAGAATTCATTGGCGGTTTGTGATGTCTCTGGAAGTATGTCGGGTACGCCTATGGAGGT 1375
||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 1364 TAAGAATTCACTGGCGGTTTGTGATGTCTCTGGAAGTATGTCTGGTACACCTATGGAGGT 1423
Query 1376 TTGTGTAGCGCTCGGGTTATTGGTTTCGGAACTTAATGAAGAGCCGTGGAAAGGGAAAGT 1435
||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||
Sbjct 1424 TTGTGTAGCGCTCGGGTTACTGGTTTCGGAGCTTAGTGAAGAGCCGTGGAAAGGGAAAGT 1483
Query 1436 TATCACCTTTAGCGAAAACCCGCAGTTGCACATTGTCACGGGTGCGAGTCTGAGAGAAAA 1495
|||||||||||||||||||||| || |||| |||||||||||| ||||||||||||||||
Sbjct 1484 TATCACCTTTAGCGAAAACCCGGAGCTGCATATTGTCACGGGTTCGAGTCTGAGAGAAAA 1543
Query 1496 GACTGAGTTTGTCAGGGAAATGGATTGGGGAATGAACACGGATTTTCAGA-AGGTATTTG 1554
|||| ||||||| || |||||||| ||||||||||||||||||||||||| || | ||||
Sbjct 1544 GACTCAGTTTGTTAGAGAAATGGAATGGGGAATGAACACGGATTTTCAGATAG-TGTTTG 1602
Query 1555 ATCGTATTCTAGAAGTTGCAGTCGAGAATAACTTAACCGATGAGCAGATGATCAAGCGGT 1614
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1603 ATCGTATTCTAGAAGTTGCAGTCGAGAATAACTTAACCGATGACCAGATGATCAAGCGGT 1662
Query 1615 TGTTTGTGTTCAGTGACATGGAGTTTGATGATGCAATGGCAAACAGCCATTCAGAGGTGA 1674
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1663 TGTTTGTGTTCAGCGACATGGAGTTTGATGATGCAATGGCAAACAGCCATTCGGAGGTGA 1722
Query 1675 GTTACCGTCTGAGTGTGGAGGACCGGTTGAAGATAAAGAAGCAACGATCCAAGGAGAAAT 1734
|||||| |||||||||||||||||| ||||||||| |||| |||| |||||||||||||
Sbjct 1723 GTTACCATCTGAGTGTGGAGGACCGATTGAAGATATCGAAGGAACGGTCCAAGGAGAAAT 1782
Query 1735 GGGAGACAGATTATGAGGTGGTTCAGAGGAAGTATAAGGAGAAGGGTTTTCAGAATGTTC 1794
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1783 GGGAGACAGATTATGAGGTGGTTCAGAGGAAGTATAAAGAGAAGGGTTTTCAGAATGTTC 1842
Query 1795 CAGAAATGGTATTTTGGAACTTAAGAGACTCATCGGCTACACCCGTGGTGGCTAACCAGA 1854
|||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||
Sbjct 1843 CAGAAATGGTATTTTGGAACTTAAGAGACTCATCGGCTACTCCGGTGGTTGCTAACCAGA 1902
Query 1855 AAGGAGTAGCTATGGTTAGCGGGTTTTCGAAGAATCTACTGACTCTGTTTCTTGAGGAAG 1914
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1903 AAGGAGTAGCTATGGTTAGCGGGTTTTCGAAGAATCTACTGACTCTGTTTCTTGAAGAAG 1962
Query 1915 GTGGGATTGTGCATCCTGAAGATGTCATGTGG-TTAGCCATCAAAGGTGAGGAGTATAAG 1973
||||||| ||| |||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 1963 GTGGGATCGTGAATCCTGAAGATGTCATGTGGATT-GCCATCAAAGGTGAGGAGTATAAG 2021
Query 1974 AAGCTTGTTGTTTATGACTGAGATACACATACACAAGCTTC 2014
||||||||||||| |||||||||||||||||||||||||||
Sbjct 2022 AAGCTTGTTGTTTTTGACTGAGATACACATACACAAGCTTC 2062
> AT5G43390.1 | Symbols: | Uncharacterised conserved protein UCP015417,
vWA | chr5:17422799-17424964 REVERSE LENGTH=2166
Length=2166
Score = 2124 bits (1150), Expect = 0.0
Identities = 1667/1912 (87%), Gaps = 53/1912 (3%)
Strand=Plus/Plus
Query 107 GGAAACCCCAGTTTCCGATGAAAACAGTTTAATCTCCCAAACCGCCACACTAAACCTTGA 166
||| || |||||||||||||| |||||| |||||||||||| |||||||||||||| ||
Sbjct 147 GGAGACACCAGTTTCCGATGACAACAGTGTAATCTCCCAAATTGCCACACTAAACCTAGA 206
Query 167 AGAACCACCACCAATGGGTCTAACTGAAAACTTCTCGCCGACGTTTCTTTCCTCCGGGAA 226
||||||| || |||||||| || |||||||||||||| |||||||| ||||||||||
Sbjct 207 AGAACCA-CA--GATGGGTCTGACGGAAAACTTCTCGCCCACGTTTCTAACCTCCGGGAA 263
Query 227 CCCATGTCTCGATTTCTTCTTCCACATCGTCCCCGATACATCTCCCGATGATCTGATCAA 286
|||||||||||||||||||||||| |||||||| || ||| || |||||||||||||| |
Sbjct 264 CCCATGTCTCGATTTCTTCTTCCATATCGTCCCAGACACACCTTCCGATGATCTGATCCA 323
Query 287 AAGGTTAGCTATTTCTTGGTCTCACGATCCTTTGACTACGTTGAAACTTGTATGCAATCT 346
|||| | || ||||||||||||||||||||||||||||||||||| || | ||||||||
Sbjct 324 AAGGCTGGCCATTTCTTGGTCTCACGATCCTTTGACTACGTTGAAGCTCCTCTGCAATCT 383
Query 347 CAGAGGAGTTAGAGGAACTGGGAAATCAGACAAAGAAGGGTTTTACACAGCTGCGTTTTG 406
|||||| |||||||||||||| ||||||||||| |||||||||||||||||||| || ||
Sbjct 384 CAGAGGTGTTAGAGGAACTGGAAAATCAGACAAGGAAGGGTTTTACACAGCTGCCTTGTG 443
Query 407 GCTTTTCAAGAATCATCCAAAGACCCTAGCTTTGAATGTCCCTGCTCTTGTTGATTTTGG 466
||||| |||||| || ||||| || |||||||||||| ||||| ||||||| ||||||||
Sbjct 444 GCTTTACAAGAACCACCCAAAAACTCTAGCTTTGAATATCCCTACTCTTGTCGATTTTGG 503
Query 467 GTATTTCAAAGATTTGCCTGAGATTCTGTTTCGGATCTTGGAAGGTCAGCAGATGGAGAG 526
||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||
Sbjct 504 GTATTTCAAAGATTTACCTGAGATTCTGCTTCGGATCTTGGAAGGTCAGCAGACGGAGAG 563
Query 527 AGGGAAGAGTCGGGTTTGGAGGAAGAGGGTTCAAAGGAAATTCAAAGGGAAGAGTGAGAA 586
||| |||| ||||||||||||||||||| |||| ||||| ||||||||| | ||||||||
Sbjct 564 AGGTAAGACTCGGGTTTGGAGGAAGAGGATTCAGAGGAAGTTCAAAGGGGATAGTGAGAA 623
Query 587 AAGGGACGA-GATTTCCGGTGACATGGAAGATCGGATTCTGGAAAATGTAGAGGAGATTG 645
|| | | | || |||||||||||||||||||||||||| |||| | ||||||| ||
Sbjct 624 AA-AGTCTACCATATCCGGTGACATGGAAGATCGGATTCTCGAAACCGCGGAGGAGACTG 682
Query 646 GTGGTTCTGTTGATAAGGTAAAGGCTAGGGGTTTACGGAAACAGAGAGAGTTCGAAAAGG 705
||||| |||||| ||| || |||||||||| |||||||||||||||||||||||||||||
Sbjct 683 GTGGTCCTGTTGGTAAAGTCAAGGCTAGGGCTTTACGGAAACAGAGAGAGTTCGAAAAGG 742
Query 706 CGAAAAAGGCGCTAGAGAGGTTTAACTCTGATGCTAATTATAGATTACTGTTTGATCGAA 765
|||||||||| ||||| |||| |||||||||||||||||| |||||||| ||||||| ||
Sbjct 743 CGAAAAAGGCTCTAGATAGGTATAACTCTGATGCTAATTACAGATTACTCTTTGATCAAA 802
Query 766 TTGCGGATTTGTTTGCGGTTA-TGTTGAAATCGGATTTGAAGTGTTTGAATTCGA-ATGA 823
|||| ||||||||||||| | | |||||||| |||||| ||| ||||||| | | || |
Sbjct 803 TTGCCGATTTGTTTGCGG-AATTATTGAAATCAGATTTGGAGTATTTGAATAC-AGATAA 860
Query 824 GTTGAATAAGATTGGTTTAGCTTCGAAGTGGTGTCCTTCTGTTGATTCTTCGTATGATAA 883
||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 861 TTTGAACAAGATTAGTTTAGCTTCGAAATGGTGTCCTTCTGTTGATTCTTCGTATGATAA 920
Query 884 GACTACTTTGATATGTGAGGCAATTGCTAGAAGGATGTTCCCTAGAGAGGAATACAAAGA 943
||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||
Sbjct 921 GACTACTTTGATATGTGAGGCTATTGCTAGAAGAATGTTCCTTAGAGAGGAATACGAAGA 980
Query 944 ---TATAGAAGAGGCGCATTATGCGTATAGGATTAGAGATAGGTTGAGGAAAGAAGTTCT 1000
||| ||||| | ||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 981 AGGTATCGAAGAAGTGCATTATGCATATAGGATTAGAGATAGGTTGAGAAAAGAAGTTCT 1040
Query 1001 TGTGCCGTTGCATAAAGCGCTTGAGTTTCCGGAGTTGT-TCATGAGTGCAAAGGAATGGA 1059
||| ||||| |||||||| |||||||| || ||| ||| | |||||||| ||||||||||
Sbjct 1041 TGTCCCGTTACATAAAGCTCTTGAGTTGCCAGAGGTGTCT-ATGAGTGCCAAGGAATGGA 1099
Query 1060 ATTTGTTGAAGTATAATAGAGTTCCTTCTGTGGCTATGAAGAATTACAAGA--A-GCTGT 1116
|| |||||||||| ||||||||||||||| | || ||| ||||||| | | | ||| |
Sbjct 1100 ATCTGTTGAAGTACAATAGAGTTCCTTCTATAGCCATGCAGAATTATA-GTTCACGCT-T 1157
Query 1117 TTGAGGAACATGATAGCGAGAGGTTTTCAC--AGTTTTTGGAGGATGTGAAGTCTGGGAA 1174
| | |||||| |||||||||||||| ||| ||||||||||||||||||| || |||||
Sbjct 1158 T-GCGGAACACGATAGCGAGAGGTT--CACCGAGTTTTTGGAGGATGTGAAATCCGGGAA 1214
Query 1175 GAAGAAGATTGCGGCTGGTGCGTTGCTTCCTCATCAGATAATCAAG-CAGCTGGAGGATG 1233
||||||||| ||||||||||||||||||||||||||||| |||| | ||||| | |||
Sbjct 1215 GAAGAAGATGGCGGCTGGTGCGTTGCTTCCTCATCAGATTATCA-GTCAGCTTTTGAATG 1273
Query 1234 AGAGTGGGAGTGAAGTTGGCGCGGAAGTTGCAGAGCTTCAATGGGCGAGAATGGTTGATG 1293
| | ||||||| || | |||| |||||||||||||||||||||||||||||||
Sbjct 1274 A---T---AGTGAAGGTGAAG---AAGTAGCAGAGCTTCAATGGGCGAGAATGGTTGATG 1324
Query 1294 ATCTTGCTAAGAAAGGGAAGCTGAAGAATTCATTGGCGGTTTGTGATGTCTCTGGAAGTA 1353
||||||| |||||||||||| ||||||| ||||||||| ||||||||||||| ||||| |
Sbjct 1325 ATCTTGCCAAGAAAGGGAAGTTGAAGAACTCATTGGCGATTTGTGATGTCTCGGGAAGCA 1384
Query 1354 TGTCGGGTACGCCTATGGAGGTTTGTGTAGCGCTCGGGTTATTGGTTTCGGAACTTAATG 1413
|| | ||||| |||||| | |||||| | ||| | |||||||||||||||||||||||||
Sbjct 1385 TGGCTGGTACACCTATGAATGTTTGTATTGCGTTAGGGTTATTGGTTTCGGAACTTAATG 1444
Query 1414 AAGAGCCGTGGAAAGGGAAAGTTATCACCTTTAGCGAAAACCCGCAG-TTGCACATTGTC 1472
|||||||||||||||||||||||||||| |||||||||||||||||| || || |||||
Sbjct 1445 AAGAGCCGTGGAAAGGGAAAGTTATCACTTTTAGCGAAAACCCGCAGCTT-CATGTTGTC 1503
Query 1473 ACGGGTGCGAGTCTGAGAGAAAAGACTGAGTTTGTCAGGGAAATGGATTGGGGAATGAAC 1532
|||||| ||||||||||||| |||||| ||||||| || |||||||||| ||||| |||
Sbjct 1504 ACGGGTTCGAGTCTGAGAGAGAAGACTAAGTTTGTTAGAGAAATGGATTTTGGAATCAAC 1563
Query 1533 ACGGATTTTCAGAAGGTATTTGATCGTATTCTAGAAGTTGCAGTCGAGAATAACTTAACC 1592
|| ||||| |||||||| |||||||| |||||||| ||||| ||||||||||||||||||
Sbjct 1564 ACAGATTTCCAGAAGGTGTTTGATCGGATTCTAGAGGTTGCTGTCGAGAATAACTTAACC 1623
Query 1593 GATGAGCAGATGATCAAGCGGTTGTTTGTGTTCAGTGACATGGAGTTTGATGATGCAATG 1652
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1624 GATGAACAGATGATCAAGCGGTTGTTTGTGTTCAGTGACATGGAGTTTGATGATGCAA-G 1682
Query 1653 -GCAAACAGCCATTCAGAGGTGAGTTAC--CGTCTGAGTG--T-GGAGGACCGGTTGAAG 1706
| | |||||||||| || ||||| || || | |||| | |||| | | | | |
Sbjct 1683 AGTAGACAGCCATTCGGAAATGAGTGACTACG-C-GAGTAACTTGGAG-AGTGACT-ACG 1738
Query 1707 ATAAAGAAGCA-ACGA-TCCAAGGAGAAATGGGAGACAGATTATGAGGTGGTTCAGAGGA 1764
| | | | | || | | ||||||||||||| |||||||| || ||||||||||
Sbjct 1739 AGAGTGTCCCGGA-GAGTTTT-G-AGAAATGGGAGACGGATTATGAAGTTGTTCAGAGGA 1795
Query 1765 AGTATAAGGAGAAGGGTTTTCAGAATGTTCCAGAAATGGTATTTTGGAACTTAAGAGACT 1824
||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 1796 AGTATAAAGAGAAGGGTTTTCAGAATGTTCCTGAAATTGTATTTTGGAACTTAAGAGACT 1855
Query 1825 CATCGGCTACACCCGTGGTGGCTAACCAGAAAGGAGTAGCTATGGTTAGCGGGTTTTCGA 1884
| || ||||||||||||||| |||| |||||||| |||||||||||||||||||||||||
Sbjct 1856 CGTCAGCTACACCCGTGGTGTCTAAGCAGAAAGGTGTAGCTATGGTTAGCGGGTTTTCGA 1915
Query 1885 AGAATCTACTGACTCTGTTTCTTGAGGAAGGTGGGATTGTGCATCCTGAAGATGTCATGT 1944
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1916 AGAATCTACTGACTCTGTTTCTTGAGGAAGGTGGGATTGTGAATCCTGAAGATGTCATGT 1975
Query 1945 GGTTAGCCATCAAAGGTGAGGAGTATAAGAAGCTTGTTGTTTATGACTGAGA 1996
||||||||| ||||||||||||||| ||||||||| |||||||||||||||
Sbjct 1976 TGTTAGCCATTAAAGGTGAGGAGTATCAGAAGCTTGCTGTTTATGACTGAGA 2027
> AT3G24780.1 | Symbols: | Uncharacterised conserved protein UCP015417,
vWA | chr3:9049446-9051593 FORWARD LENGTH=2148
Length=2148
Score = 100 bits (54), Expect = 4e-20
Identities = 221/297 (74%), Gaps = 30/297 (10%)
Strand=Plus/Plus
Query 1364 GCCTATGGAGGTTTGTGTAGCGCTCGGGTTATTGGTTTCGGAACT-TAATGAAGAGCCGT 1422
||| |||||||||| || || || || || | || || || || | | |||||||| |
Sbjct 1557 GCCAATGGAGGTTTCAGTCGCCCTTGGATTGCTAGTCTCTGAGCTATCA-GAAGAGCCAT 1615
Query 1423 GGAAAGGGAAAG-TTATCACCTTTAG-CGAAA-ACCCGCAGTTGCACATT-GTCACGGGT 1478
||||| |||||| |||| || || || | ||| || | | |||| || || | ||
Sbjct 1616 GGAAA-GGAAAGCTTATAACATTCAGAC-AAAGTCCTG-AACTGCA-TTTGGTGAAAGGA 1671
Query 1479 G-CGAGTCTGAGA-GAAAAGACTGAGTTTGTCAGG-GA-AATGGATTGGGGA-ATGAACA 1533
| ||| | ||||| |||| || |||||||| || || ||| | | |||| |||||||
Sbjct 1672 GACGA-TTTGAGATCAAAA-ACAGAGTTTGT--GGAGAGCATGCAAT-GGGATATGAACA 1726
Query 1534 CGGATTTTCAGAAGGTATTTGA-TCGTATTC-TAGAAGTTGCAGTCGAGAA-TAA-CTTA 1589
| ||||||||||| || ||||| | | |||| || |||| || || || || || ||||
Sbjct 1727 CTGATTTTCAGAAAGTGTTTGATTTG-ATTCTTA-AAGTGGCCGTGGA-AAGCAAGCTTA 1783
Query 1590 A-CCGATGAGCAGATGATCAAGCGGTTGTTTGTGTTCAGTGACATGGAGTTTGATGA 1645
| ||| || | ||||||||| || |||||||||||||||||||||||||||||||
Sbjct 1784 AGCCG-CAAG-ACATGATCAAGAGGGTGTTTGTGTTCAGTGACATGGAGTTTGATGA 1838
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 99798683460
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5