BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg948847 Length=902 Score E Sequences producing significant alignments: (Bits) Value AT5G43290.1 | Symbols: WRKY49, ATWRKY49 | WRKY DNA-binding prot... 737 0.0 > AT5G43290.1 | Symbols: WRKY49, ATWRKY49 | WRKY DNA-binding protein 49 | chr5:17371838-17373201 REVERSE LENGTH=1092 Length=1092 Score = 737 bits (399), Expect = 0.0 Identities = 483/522 (93%), Gaps = 11/522 (2%) Strand=Plus/Plus Query 1 TTTTCTTGTTCCCATACTCATATGGCAGAAGAAGGTTATCAGTGGACAAGAAGGTGTGGA 60 ||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct 98 TTTTCTTGTCCCCATACTCATATGGAAGAAGAAGGTTATCAGTGGGCAAGAAGGTGTGGA 157 Query 61 AACGACGCCGTTAAAGATATTTTTGTTAATGAGCCACCTCTATTCTTTCTTCCTCAAGAA 120 ||| |||||||| ||||| ||||||| ||||||||||||| |||||||| |||||||| Sbjct 158 AACAACGCCGTTGAAGATCCTTTTGTTTATGAGCCACCTCTTTTCTTTCTGCCTCAAGAC 217 Query 121 CAACATC--AT--A--GGCTCATGCCAAATGAAGATTCCATTACCAACAAGTTCGTCACA 174 ||||||| || | ||||||||||||||||||||| |||| ||||||||||||||||| Sbjct 218 CAACATCATATGCATGGGCTCATGCCAAATGAAGATTTCATTGCCAACAAGTTCGTCACA 277 Query 175 TCAACACTTTACTCCGGTCCACGAATCCAAGATATCGCAAACGCTCTGGCCTTGGTTGAA 234 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct 278 TCAACACTTTACTCCGGTCCACGAATCCAAGATATTGCAAACGCTCTGGCCTTGGTCGAA 337 Query 235 CCCCTGTCCCACCCAGTCCCAGAAATCTCCAAATCAACGGTTCCACGGTTGGAAAGAAGT 294 |||||| |||||||||||| ||||||||| |||||||| ||||| | |||||||||||| Sbjct 338 CCCCTGACCCACCCAGTCCGAGAAATCTCTAAATCAACAGTTCCTCTTTTGGAAAGAAGT 397 Query 295 ACTTTGAACAAGGTGGATAAGTACACTTTAAAGGTGAAGAATAATAGTAATGGAATGTGT 354 ||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 398 ACTTTGAGCAAGGTGGATAGGTACACTTTAAAGGTGAAGAACAATAGTAATGGAATGTGT 457 Query 355 GATGATGGATACAAATGGAGAAAATATGGCCAAAAATCAATCAAAAATAGCCCTAACCCG 414 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 458 GATGATGGATACAAATGGAGAAAATATGGCCAAAAATCAATCAAAAATAGCCCTAACCCA 517 Query 415 AGGAGTTATTACAAGTGCACAAACCCAATATGCAATGCTAAGAAGCAAGTGGAGAGATCA 474 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 518 AGGAGTTATTACAAGTGCACAAACCCAATATGCAATGCAAAGAAGCAAGTGGAGAGATCA 577 Query 475 ATTGATGAGCCTAACGTAACACATATATCATCACCTACGAAG 516 ||||||||| | | ||||||||||||||| |||||||||| Sbjct 578 ATTGATGAG--T--C-TAACACATATATCATTACCTACGAAG 614 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 44055346919 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5