BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg949048 Length=259 Score E Sequences producing significant alignments: (Bits) Value AT1G53000.1 | Symbols: KDSB | Nucleotide-diphospho-sugar transf... 215 2e-55 > AT1G53000.1 | Symbols: KDSB | Nucleotide-diphospho-sugar transferases superfamily protein | chr1:19745046-19747245 REVERSE LENGTH=1269 Length=1269 Score = 215 bits (116), Expect = 2e-55 Identities = 146/160 (91%), Gaps = 3/160 (2%) Strand=Plus/Plus Query 7 TCTTCTCA-AAAGACATGGATTGTTCACGGGATCTTAGCCGGAACAACGATTGCAGCCGC 65 |||||||| ||| |||||||||||| |||||||||| ||||||||| ||||||||||||| Sbjct 137 TCTTCTCAGAAA-ACATGGATTGTTAACGGGATCTTGGCCGGAACAGCGATTGCAGCCGC 195 Query 66 GATTGGCGCAAGTGCGTATCTAGGTTGATCCAAGAAATTCCGGAGCCGGGTCATCGGAAT 125 || |||||| |||| ||||| ||| |||||||||||||||||||||||||| ||||||| Sbjct 196 AATCGGCGCACGTGCTTATCTGGGTCGATCCAAGAAATTCCGGAGCCGGGTCGTCGGAAT 255 Query 126 CATTCGCGCACGTTACGCTTCCTCTCGATTCGAGGGCTAA 165 ||||| |||||||||||||||||||||||||||||| ||| Sbjct 256 CATTCCCGCACGTTACGCTTCCTCTCGATTCGAGGG-TAA 294 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 11812921015 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5