BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg949134

Length=897
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G35630.1 | Symbols: MOR1, GEM1 | ARM repeat superfamily prot...  95.3    9e-19


> AT2G35630.1 | Symbols: MOR1, GEM1 | ARM repeat superfamily protein 
| chr2:14966678-14980606 FORWARD LENGTH=6332
Length=6332

 Score = 95.3 bits (51),  Expect = 9e-19
 Identities = 69/78 (88%), Gaps = 0/78 (0%)
 Strand=Plus/Plus

Query  376   GATGCATTTGGAGTCAACGGAAGCTCTaaaaaaaaTTCTAGTAGAGGCTAATAAACGTAT  435
             ||||| |||||||||||  |||||| | || |||||||| | ||||||||||||||||||
Sbjct  2754  GATGCGTTTGGAGTCAATTGAAGCTGTCAATAAAATTCTGGAAGAGGCTAATAAACGTAT  2813

Query  436   CCAACCAACTGGAATTGG  453
             |||||||||||||| |||
Sbjct  2814  CCAACCAACTGGAACTGG  2831



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 43804176184


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5