BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg949166

Length=358
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G10960.1 | Symbols: ATAZG1, AZG1 | AZA-guanine resistant1 | ...   560    3e-159


> AT3G10960.1 | Symbols: ATAZG1, AZG1 | AZA-guanine resistant1 
| chr3:3424813-3426997 REVERSE LENGTH=2185
Length=2185

 Score =  560 bits (303),  Expect = 3e-159
 Identities = 338/355 (95%), Gaps = 2/355 (1%)
 Strand=Plus/Plus

Query  5     TATGTGTCTTCACGGACGAATGGAGAGTCCAACGTTTTGGCTT-GGTATCGTCGGATTTG  63
             ||||||| |||||||||||||||||||||||||||| ||| || |||||||||||||| |
Sbjct  1127  TATGTGTATTCACGGACGAATGGAGAGTCCAACGTTCTGG-TTAGGTATCGTCGGATTCG  1185

Query  64    TGATCATAGCTTATTGTTTGGTGAAGAACGTGAAAGGAGCGATGATCTACGGGATCGTCT  123
             |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct  1186  TGATCATAGCTTATTGTTTGGTAAAGAACGTGAAAGGAGCGATGATCTACGGGATCGTCT  1245

Query  124   TCGTAACGGCCGTTTCGTGGTTCCGTAACACGGAGGTAACGGCGTTTCCGAACACATCGG  183
             ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct  1246  TCGTAACGGCCGTTTCGTGGTTCCGTAACACAGAGGTAACGGCGTTTCCGAACACATCGG  1305

Query  184   CCCGTGACGCAGCTCATGATTATTTTAAAAAGATTGTTGATGTACACGTCATCAAACACA  243
             || | || ||||||||||||||||| |||||||| ||||||||||||||||| ||||| |
Sbjct  1306  CCGGAGATGCAGCTCATGATTATTTCAAAAAGATCGTTGATGTACACGTCATTAAACATA  1365

Query  244   CCGCCGGAGCTTTAAGCTTCTCCGGGATAAACAAAGGACATTTCTGGGAAGCTCTGGTGA  303
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1366  CCGCCGGAGCTTTAAGCTTCTCCGGGATAAACAAAGGACATTTCTGGGAAGCTCTGGTGA  1425

Query  304   CATTCCTCTACGTTGATATTTTGGATACGACATGAACGCTTTACTCAATGGCTAG  358
             |||||||||||||||||||||||||||||||  ||||||||||||| ||||||||
Sbjct  1426  CATTCCTCTACGTTGATATTTTGGATACGACGGGAACGCTTTACTCCATGGCTAG  1480



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 16789428166


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5