BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg949390
Length=4393
Score E
Sequences producing significant alignments: (Bits) Value
AT5G49110.2 | Symbols: | unknown protein; INVOLVED IN: biologi... 5681 0.0
> AT5G49110.2 | Symbols: | unknown protein; INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown;
EXPRESSED IN: cultured cell; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa
- 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink). | chr5:19900203-19905925
FORWARD LENGTH=4413
Length=4413
Score = 5681 bits (3076), Expect = 0.0
Identities = 3590/3837 (94%), Gaps = 40/3837 (1%)
Strand=Plus/Plus
Query 21 ATGACCGTCGTCGCCGCCGCCGAAGAACCGA-CTCAGAGACCTTTCACCGACAACGATGT 79
|||||||||| |||||| ||||||||||| | ||||||||||| |||||||||| ||| |
Sbjct 1 ATGACCGTCGCCGCCGCAGCCGAAGAACC-ATCTCAGAGACCTCTCACCGACAAAGATAT 59
Query 80 CATTCGTTTAGCACAGTACCACCATTGTCAAACCGGAttctctctcccaccttaccttct 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 60 CATTCGTTTAGCACAGTACCACCATTGTCAAACCGGATTCTCTCTCCCACCTTACCTTCT 119
Query 140 ctcaccatcttcccacgattctcttctctcatacctcAAATCTCGCTCTTCTTCACCATC 199
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 120 CTCACCGTCTTCCCACGATTCCCTTCTCTCATACCTCAAATCTCGCTCTTCTTCACCATC 179
Query 200 TCCGTCGAAACCAGTTTCTGAGTACGTGATCGctcttctatctctaatttcactctctcc 259
||||||||||| |||||||||||| || |||||||||||||||||||| || ||||| ||
Sbjct 180 TCCGTCGAAACAAGTTTCTGAGTATGTAATCGCTCTTCTATCTCTAATATCTCTCTCCCC 239
Query 260 gagtactccgtctctct-cgtctctcctcgcctctcttctcatctccTACACACAAATCT 318
| |||||| ||||||| | ||||||||||| |||||||||||||||||||| |||||||
Sbjct 240 TACTACTCCCTCTCTCTGC-TCTCTCCTCGCTTCTCTTCTCATCTCCTACACCCAAATCT 298
Query 319 TCAATTCCGGCAAAATCCCAAGCGATTCGGATTCTCTCAAGACGATTCAGCTCTTCGGTA 378
|||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 299 TCAATTCCTGCAAAATCCCAAGCGATTCTGATTCTCTCAAGACGATTCAGCTCTTCGGTA 358
Query 379 CTCTCTTACGACACTTACACGTTAAGGAGGTGAAATTTGTAGTCGATTCGATCTTATTAG 438
||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||| ||
Sbjct 359 CTCTCTTACGATACTTACACGTTAAGGAGGTGAAATCTGTAGTTGATTCGATCTTATCAG 418
Query 439 GTGTGTCTAGAGTTATCACTGTTGATGAAGCCCAGTTGTTTGATTTATTGCTTGTGTGCT 498
||||| ||||||||||||||||||||||||||||| |||| |||||||||| ||||||||
Sbjct 419 GTGTGACTAGAGTTATCACTGTTGATGAAGCCCAGGTGTTCGATTTATTGCCTGTGTGCT 478
Query 499 TTGATTTATTGCGGAATTCGAGAGAAGCTAAAGCTAGTGAAATCGATTTCGTTAATTCGG 558
||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||
Sbjct 479 TTGATTTATTGCG---T---AGAGAAGGTAAAGCTAGTGAAATCGATTTCGTTAATTCGG 532
Query 559 CGATTGATCGTGTTCTTAGTTGTGAATGGAGTAAAGGGTTGTTGACGAAAATGGTATCTC 618
|||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||
Sbjct 533 CGATTGATCGTGTTCTTAGTTGTGAATGGAACAAAGCGTTGTTGACGAAAATGGTTTCTC 592
Query 619 TAGCTAAGGAGTTTTCGTTTCTGGATAAAGGGAGAAAGAGTGAATTGGTGGAGAAAGTGT 678
| || ||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 593 TTGCAAAGGAGTTTTCATTTCTGGATAAAGGGAGAAAAAGTGAATTGGTAGAGAAAGTGT 652
Query 679 TTCTTGGTATTAAGTTGATAGACTTGCAGGATTTGCCTTCACTTGTGTATCAATTGTTGG 738
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 653 TTGTTGGTATTAAGTTGATAGACTTGCAGGATTTGCCTTCACTTGTGTATCAATTGTTGG 712
Query 739 TTCTTGCTTCTAAAGGTTTTTGCAAGAGGGAAGTGATTGGAGGTGTTGTTGGtttttttG 798
||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct 713 TTCTTGCCTCTAAAGGTTTTTGCAAGAGGGAAGTGATTGGTGGTGTTGTTGGTTACTTTG 772
Query 799 GATCTAAAGCTGAGACTAGAGTAGCTTCTGTTGTTAGACAGATAGAAGGAACTGTTCTTC 858
| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 773 GGTCTAAAGCTGAGACTAGAGTAGCTTCCGTTGTTAGACAGATAGAAGGAACAGTTCTTC 832
Query 859 TTCATGTGAATTTCGCAGTGAAGCAGGATCCTTCATTGGGGCTAGAGGTTGTGGCGTTAG 918
||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||
Sbjct 833 TTCATGTGAATTTTGCTGTGAAGCAGGATCCTTCATTGGGGCAAGAGGTTGTGGCGTTAG 892
Query 919 TCAAATCTGATCTTAGAGCTTTCAATCATTTTACAGTTGCGGTTCTGTTTTCGGTTGCTC 978
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 893 TCAAATCTGATCTTAGAGCTTTCAATCATTTTACAGTCGCGGTTCTGTTTTCCGTTGCTC 952
Query 979 GGGTTAGAAAGTTTGGTGAGAATTCCTTAGGGATTTTGAGAACGGCTTTGCTTAATGCGT 1038
|||||||||| || ||||||| ||||| ||||| ||||||||||||||||||| |||||
Sbjct 953 GGGTTAGAAAATTCGGTGAGAGCTCCTTGGGGATGTTGAGAACGGCTTTGCTTACTGCGT 1012
Query 1039 ACAATGATTATC-GACTCTCCAAAGATTGCAAGTGGCTACCTGATGAGCTTAAGGAAGAC 1097
|||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1013 ACAATGATTA-CAGACTCTCCAAAGATTGCAAGTGGCTACCTGTTGAGCTTAAGGAAGAG 1071
Query 1098 AGTTTCCTGCATGCCAAATTGGTTGAAAAATCTTTGCTAAGAGCGGTTAGTGAGTGCAGA 1157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1072 AGTTTCCTGCATGCCAAATTGGTTGAAAAATCTTTGCTAAGAGCGGTTAGTGAGTGCCGA 1131
Query 1158 TATGGGAGAGAGCATGTGGTTCCAAGTGTTATCCAGTTTGGATTTATGTTGCTAGAATCT 1217
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 1132 TATGGGAGAGAGCATGTGGTTCCAAGTGTTATTCAGTTTGGCTTTATGTTGCTAGAATCT 1191
Query 1218 GTCGAAGAAAGTAGATCCAATGAGTTTGGTGATTCTAATGGTGTATTGGGTATTGAGAAG 1277
|| |||||| ||||||||||||||||||||||||| || |||||| | ||||||||||||
Sbjct 1192 GTTGAAGAAGGTAGATCCAATGAGTTTGGTGATTCGAAAGGTGTACTCGGTATTGAGAAG 1251
Query 1278 CTTAGCATTCAGATTTTGGGAACCCTATTTGAAGTCCATGATATGACAAGAAACGAGATA 1337
||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1252 CTTAGCATTCAGATTCTGGGAACCCTATTTGAAGTCCATGATATGACGAGAAACGAGATA 1311
Query 1338 ATTGAGCAATGCAAGTTTCGCATTCTTTCTTTGAAATGCGCAAAGAGCAAGCCAATAGTA 1397
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1312 ATTGAGCAATGCAAATTTCGCATTCTTTCTTTGAAATGCGCAAAGAGCAAGCCAATAGTA 1371
Query 1398 AGGTTGTTAAGGTATCTTGTCCAGAGATACTCACTTATCATGTTGGAATTTGTCCACCAT 1457
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1372 AGGTTGTTAGGGTATCTTGTCCAGAGATACTCACTTATCATGTTGGAATTTGTCCACCAT 1431
Query 1458 CTCAAAGAGTTATTGGGTTATTTCACTTTCATGGAGGGAAATATCAGCTGTCTTCTTGTT 1517
|||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 1432 CTCAAAGAGTTATTGGATTATTTCACTTTCATGGAGGGACATATCAGCTGTTTTCTTGTT 1491
Query 1518 TCTGCTGTTATCCCGCTCATCAAATTCAGCCATGACCTTCAGGACTATACCATCTTGGTG 1577
||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||
Sbjct 1492 TCTGCTGTTATCCCGCTCATCAAATTCAGCCGTGATCTTCAGGACTACACCATCTTGGTG 1551
Query 1578 ATTCGCAAGGCTATGTTTAGACGCGAATATACAGTTCGTGTTGCAGCGAC-AAAGGTTAT 1636
|||||||| |||||||||||||| ||| ||||||||||||||||||| || |||| | ||
Sbjct 1552 ATTCGCAAAGCTATGTTTAGACGGGAAGATACAGTTCGTGTTGCAGCAACCAAAG-TAAT 1610
Query 1637 AACTGATCTTATACTTGCAGAGAAACAAGCTAAGAGAGACGGTTCATTTACTTTACAAGA 1696
|||||||||||||||||||||||||| ||||||||||||| | ||||||||||| |||||
Sbjct 1611 AACTGATCTTATACTTGCAGAGAAACTAGCTAAGAGAGACAGCTCATTTACTTTCCAAGA 1670
Query 1697 CTCATCAAGCCAAGCCAGTTCCAGTCAGCAGACTGAGATGAGCTGTATAGTGAGGGGAAA 1756
|||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1671 CTCAGCAAGCCAAGCCAGTTCCAGTCAGCAGACTGAGATGAGCTGTATTGTGAGGGGAAA 1730
Query 1757 CCTCTTCACTGAACTGAATGGGTTGCTTCAAAGATGTCTTTACCAACAGGCATTAGTGAA 1816
|||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct 1731 CCTCTTTACTGAACTGAATGGGTTGCTTCAAAGATGTCTTTACCAGCAGGCAAGAGTGAA 1790
Query 1817 GGAAGTAGTTTATGATGGGCTTGTGAAGTTAGTCTTGATTGATCCATCAACTGGAGGACA 1876
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct 1791 GGAAGTAGTTTATGATGGGCTTGTGAAGTTAGTCCTGATTGATCCATCAAGTGGAGGACA 1850
Query 1877 TGTGTTGGACTTTCTTATGCCTCACTTTCTTCGTTTCTTCAGACAGGACACAGATTTTCA 1936
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct 1851 TGTGTTGGACTTTCTTATGCCTCATTTTCTTCGTTTCTTCGGACAGGACACAGATTTTCA 1910
Query 1937 GCTCGGAATCATTTCATGCATTAAATTAGAAGGTGGA-AAATATA-TCATTGAAGAGCCC 1994
|| ||||||| ||||||||||| | ||||||||| | |||| || | ||||||||||||
Sbjct 1911 ACTTGGAATCACTTCATGCATTAGAGTAGAAGGTG-ACAAATTTACT-ATTGAAGAGCCC 1968
Query 1995 TTGGATAGGCTTCTCTTTTGTATCTCTTGGATTTTACTCCTCCAGGTGCACAACAGCTCG 2054
||||||||||||||||||||| |||||||||||||||| |||||| ||| ||||||||
Sbjct 1969 TTGGATAGGCTTCTCTTTTGTGTCTCTTGGATTTTACTTCTCCAGCAGCAAAACAGCTCT 2028
Query 2055 GATCGGCCTTCCGATGCCGCGTGGCCATGCTTTGGTTTCTCACTTTCACAAGATAATGAG 2114
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2029 GATCGGCCTTCCGATGCTGCGTGGCCATGCTTTGGTTTCTCCCTTTCACAAGATAATGAG 2088
Query 2115 CAG--GGAGGGA-GAAACATATCTCATGAAGTTTACTCCAATGCTTTGGTGAAGATCCGA 2171
||| || ||| ||||| |||||||||||| ||||||| ||||||||| |||||||||
Sbjct 2089 CAGCAGGTTGGAAGAAACCTATCTCATGAAGCGTACTCCAGTGCTTTGGTAAAGATCCGA 2148
Query 2172 AACTTCTTACTAGGCAAGAATTTAGAAGATATTGTTGGGCAGTCTCAGGACACAGTTTCC 2231
| |||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||
Sbjct 2149 AGCTTCTTACTAGGCAAGAAGTTAGGAGATATTGTAGGGCAGTCTCAGGACACAGTTTCT 2208
Query 2232 GCATCTCTAGAAGACGATAAAAGAAAATCCTATTGTTTGATTATATTGGGAATCATTCAA 2291
|||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2209 GCATCTCTCGAAGAAGATAAAAGAAAATCCTATTGTTTGATTATATTGGGAATCGTTCAA 2268
Query 2292 GTGCAGCTAAATTATATTATAGTGGATCTAGAGAAACAGCCTGAAGGGAAAAAGGGTGCT 2351
|||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct 2269 GTGCTGCTAAATTATATTATAGTGGATCTAGAGAAACAGCCAGAAGGGAAAAAGGGTTCT 2328
Query 2352 GTCAGAAAAGAGATTGTCGATTTGATTGATCTTTATGAATCACTGGAAAAAGACGTGGGG 2411
|||||||| ||||||||||| || |||||||||||||||||||||||||| || |||||
Sbjct 2329 GTCAGAAAGGAGATTGTCGACTTAATTGATCTTTATGAATCACTGGAAAAGGATGTGGGA 2388
Query 2412 AAATTAAAACCGAGCAATATTGGCAAGAGGGTACGATTTAGCACCTGTAATGATACTGAT 2471
|||| || | ||||||| |||||||||| |||||||||||| |||||||||||||||||
Sbjct 2389 AAATCGAAGCAGAGCAATGTTGGCAAGAGAGTACGATTTAGCGCCTGTAATGATACTGAT 2448
Query 2472 GC-GGGAAACACAAGTATCAGTGAAGAGCGAGAAAAAGTTCCCTTTTTGGCAACTTCAAG 2530
| ||||||||| ||||||| |||||||||||| ||||||||||||||||| ||||||||
Sbjct 2449 -CTGGGAAACACGAGTATCAATGAAGAGCGAGAGAAAGTTCCCTTTTTGGCTACTTCAAG 2507
Query 2531 TATCTACCAGCTATTTCTTCTTAGTTTCAAACTCTATAGCAGCAAATCCGTTGGTACTCT 2590
|||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 2508 TATCTACCAGCTATTTCTACTCAGTTTCAAACTCTATAGCAGCAAATCCGTTGGTACTCA 2567
Query 2591 TTCAGGTTCGCAGGATCACAGCCAGTCATCACCAGCCAAGACAGAAAAATCAATTTCTAA 2650
||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||| |
Sbjct 2568 GTCAGGCTCGCAGGATCACAGCCATTCATCACCAGCGAAGACAGAAAAATCAATTT-T-- 2624
Query 2651 AATTTTCTCCTTCACTTTGCAAGTGTGTGTTGGGCACATAAGAT-CATCTCTTTGCATGA 2709
||||||||||||||| || |||||||||||||||| || |||||||||||||||
Sbjct 2625 ------CTCCTTCACTTTGCATGTTTGTGTTGGGCACATAA-ATTCATCTCTTTGCATGA 2677
Query 2710 AGGAGGAAAATCCACTTAAACCGTTGGTCTGTGGTGACATGAAAGTTCTGGGTCCTCCAC 2769
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2678 AGGAGGAAAATCCACTTAAACCGTTGGTCTGTGGTGACATGAAGGTTCTGGGTCCTCCAC 2737
Query 2770 TGCTAAAAGTACTTTACCTGCTAAAGCCAGATCCACCTCTAGCGACCGGACAGACCAAGA 2829
||||||||||| ||||||||||||||||||| ||||||||||| || |||||||| || |
Sbjct 2738 TGCTAAAAGTAGTTTACCTGCTAAAGCCAGAGCCACCTCTAGCTACTGGACAGACGAATA 2797
Query 2830 AGGACA-GTAAAGGAAAGAAGGATGCTGAAGGAAGAAAACAGTGTCTACATCTGGCCTTA 2888
|||| | | ||||||| ||| |||| ||| ||||||||||||||||||||||||||||||
Sbjct 2798 AGGAGAAG-AAAGGAAGGAAAGATGTTGACGGAAGAAAACAGTGTCTACATCTGGCCTTA 2856
Query 2889 CTTAGCTTGAAAGAGCTGCTCAATATATATTCAAGTGGATCTGGTTTGACTGGCTTGCTT 2948
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2857 CTTAGCTTGAAAGAGCTACTCAATATATATTCAAGTGGATCTGGTTTGACTGGCTTGCTT 2916
Query 2949 GAAGATTTGTTGGCAGTACCTGCATCCGAGGATGCTACTTTAGAAGAGTGCAGGGAAGCT 3008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2917 GAAGATTTGTTGGCAGTACCTGCATCCGAGGATGCTACTTTAGAAGAGTGCAGGGAAGCT 2976
Query 3009 TCAAGAATTGAAGACCCACTTGTAAAGGGCATCGAAATTTTCATGGAGAAAATCATGAAG 3068
|||| ||||||||| |||||| ||||| |||||||||||||||||| |||||||||||||
Sbjct 2977 TCAAAAATTGAAGATCCACTTATAAAGAGCATCGAAATTTTCATGGCGAAAATCATGAAG 3036
Query 3069 CCCATGATCACGGACTTTATCGCGCAAAACTCTAATGATGTAGAGGAAGCTAATACTATA 3128
||||||||||| |||||||||||||||||||||||||| |||||||||||||| || |||
Sbjct 3037 CCCATGATCACAGACTTTATCGCGCAAAACTCTAATGACGTAGAGGAAGCTAAGACCATA 3096
Query 3129 ATATTCAATTGCGCTGTTCAGATTCTTTGTG-CTATAATGTTGAAGCTTGGGAACAATCT 3187
|||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 3097 ATATTCAATTGCACTGTTCAGATTCTTTGTGAC-ATAATGTTGAAGCTTGGGAACAATCT 3155
Query 3188 ACCAGACAAATCCAAACAAAGGCATGGATCATGGGCTCATCAAATGTGCAGAAGCTGTGA 3247
||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 3156 ACCAGACAAATTCAAACAAAGGCATGGATCATGGGCTCATCAAATCTGCAGAAGCTGTGA 3215
Query 3248 AACATCTAACACCACTGTGGCAAAGAGCATTGTGAAACTTGCCATCTCTTTTACCACATC 3307
|||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||
Sbjct 3216 AACATCTAACACCACTGTGGCAAAGAGCGTTCTGAAACTTGCCATCTCTTTTACTACATC 3275
Query 3308 ACCTGGTGATCTATGCATAGCCGTTGAAGTGGCTAAGGAGTTGCAAAATATCATGGGTTT 3367
||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct 3276 CCCTGGTGATCTATGCATAGCCGTGGAAGTGGCTCAGGAGTTGCAAAATATCATGGGTTT 3335
Query 3368 AGACAAATCTGATACGTTAGAAGTGTCTGAGTCATACATGGTCATAAACCAGTCAACTAG 3427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3336 AGACAAATCTGATACGTTAGAAGTGTCTGAGTCATACATGGTCATAAACCAGTCAACTAG 3395
Query 3428 TGCTTCTGTAACTTCTTGCATATTGCAATCAACTGATTCAGCAATAGTTGAAATGGATTG 3487
|||||| ||||||||||| ||||| || || | |||||||||||||||||| ||||||||
Sbjct 3396 TGCTTCCGTAACTTCTTGTATATTACAGTCTATTGATTCAGCAATAGTTGACATGGATTG 3455
Query 3488 GGCCACAAAGAAGCTAAAGAA-TTTCTATGTGGTCTCTCAGAAGAACATCCATCTCAACG 3546
||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| ||
Sbjct 3456 GGCCACAAAGAAGCTAAAGAACTTT-TATGTGGTCTCTCAAAAGAACATCCATCTCAGCG 3514
Query 3547 ATGAAACTGAGAGTACAGTCGGGTTGGTTCTCGAGGAAGCCCTTTACTCAATGGCTGAGT 3606
|||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 3515 ATGATACTGAGAGCACAGTCGGGTCGGTTCTCGAGGAAGCCCTTTACTCAATGGCTGAGT 3574
Query 3607 CAACAGTCAGAATACTTTCTTCCTTTGTGTTGATGAACCTCAAAGACTCGCAAGCAGCGC 3666
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 3575 CAACAGTCAGAATACTTTCTTCCTTTGTTTTGATGAACCTCAAAGAGTCGCAAGCAGCGC 3634
Query 3667 AGTTTCTTAGACTAGCAGTTAGGTTTTACAAACAATTGGCACAAATTGTGAAGCTGAGGA 3726
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 3635 AGTTTCTTAGACTAGCAGTTAGGTTTTATAAACAATTGGCACAAATTGTGAAGCTGAGGA 3694
Query 3727 TTGCTCCCAAGGGCTGCAAGCAAATTCTTCCCAGCCTTAAATTTCAAAAACTGGTGGAAC 3786
||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 3695 TTGCTCCCAAGGGTTGCAAGCAAATTCTTCCTAGCCTTAAATTTCAAAAACTCGTGGAAC 3754
Query 3787 TAACTTGCAAGAGTCTCACAGTTCCTTTATATCCCTTTTTATCTGAAATGCAAAAGG 3843
| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 3755 TGACTTGCAAGAGTCTCACGGTTCCTTTATATCCCTTTTTATCTGAAATGCAAAAGG 3811
Score = 776 bits (420), Expect = 0.0
Identities = 499/535 (93%), Gaps = 13/535 (2%)
Strand=Plus/Plus
Query 3841 AGGAACAACAAGAAAGTGTGAGTTC-CAATTCCAAGGGCATAATCAATAAGATCAAACAG 3899
|||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||
Sbjct 3890 AGGAACAACAAGAAAGTGTGAG-TCACAATTCCAAGGGAATAATCAATAAGATCAAACAG 3948
Query 3900 GAGAACAAATGCATTCCTGATTTGATATTCCAGATAGAAGACTGTGAAAGATACCTAATT 3959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3949 GAGAACAAATGCATTCCTGATTTGATATTCCAGATAGAAGACTGTGAAAGATACCTAATT 4008
Query 3960 CAGCTAAGCAAAGTTACTAAATTGAATTTGTTGAGGCATGCCAAGCGCAGCACCGCCAGA 4019
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 4009 CAGCTAAGCAAAGTTACTAAATTGAATTTGTTGAGGCATGCCAAGCGCAGCACTGCCAGA 4068
Query 4020 GACTTTAAAATAATTGAAGATGCAGAACCTCCTGCAGGAGATGAAGATGGTGGAAACCAG 4079
||||| ||||||||||||||| |||| ||||||||||||| |||||||| |||||||||
Sbjct 4069 GACTTCAAAATAATTGAAGATTCAGACCCTCCTGCAGGAGGCGAAGATGGAGGAAACCAG 4128
Query 4080 GAGGAAGAGACAGAGATACAGAGCAATAACT-TTGGCATTAACGAGGATGATTTAAGACA 4138
|| ||||||||||||| ||||| |||||| | ||||| |||||||||||||||||
Sbjct 4129 GAAGAAGAGACAGAGACACAGAACAATAA-TATTGGC------GAGGATGATTTAAGACA 4181
Query 4139 AGAGTCAGATGATGATGGTTCAGAAGAAATGTTGTCTCCCCGAAATGCTAGTTCCGTATC 4198
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 4182 AGAGTCAGATGATGATGGTTCAGAAGAAATGTTGTCCCCCCGAAATGCTAGTTCAGTATC 4241
Query 4199 ATCACCGGGCTTAGATTCTGATAAAGCAATAGCAGCagaaacagaagaggacgacgaaga 4258
|||||| || ||||||||||||||| |||||||||||| ||||||||||||||| |||||
Sbjct 4242 ATCACCAGGATTAGATTCTGATAAAACAATAGCAGCAGCAACAGAAGAGGACGATGAAGA 4301
Query 4259 agaaaaggaagaacaagaagaaggaaaagaagaaagTGGCGATAATCGTCCTAAAAAGAT 4318
|||| | | |||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct 4302 AGAACA--A-GAACAAGATGAAGGAGAAGAAGAAAGTGGCGATAATCGTCCTAAAAAGAT 4358
Query 4319 GGCTAAGAAGAGCTGGGTTGTGGAAGATTCTGATGAAGATTCTGAAACATTTTAG 4373
||||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 4359 GGCTAGGAAGAGTTGGGTTGTGGAAGATTCTGATGAAGATTCTGAAACATTTTAG 4413
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 219028873138
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5