BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg949407

Length=370
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G10960.1 | Symbols: ATAZG1, AZG1 | AZA-guanine resistant1 | ...   431    2e-120


> AT3G10960.1 | Symbols: ATAZG1, AZG1 | AZA-guanine resistant1 
| chr3:3424813-3426997 REVERSE LENGTH=2185
Length=2185

 Score =  431 bits (233),  Expect = 2e-120
 Identities = 279/302 (92%), Gaps = 0/302 (0%)
 Strand=Plus/Plus

Query  3     GTTTATTTCTTCTTAGCGATGTTTTTCACGCCATTGCTAGCTTCGATTCCAGCTTGGGCG  62
             ||||||||||| ||||||||||||||||| || ||||||||||||||||| || ||||||
Sbjct  1662  GTTTATTTCTTGTTAGCGATGTTTTTCACACCGTTGCTAGCTTCGATTCCCGCATGGGCG  1721

Query  63    GTTGGTCCGCTGTTGATATTAGTCGGAGTGATGATGATAAAATCGGTAACGGAGATCAAT  122
             |||||||||| ||||||||||||||||||||||||||| ||||| || || |||||  ||
Sbjct  1722  GTTGGTCCGCCGTTGATATTAGTCGGAGTGATGATGATGAAATCAGTCACAGAGATTGAT  1781

Query  123   TGGGAAGATATGAGGGAAGCGATTCCGGCATTCGTGACAATGATTCTAATGCCGTTGACT  182
             |||||||||||||| || |||||||||||||| |||||||||||||| ||||||||||||
Sbjct  1782  TGGGAAGATATGAGAGAGGCGATTCCGGCATTTGTGACAATGATTCTGATGCCGTTGACT  1841

Query  183   TACTCCGTCGCGTATGGATTGATCGGAGGGATTGGAAGCTACGTGGTGTTGCATCTGTGG  242
             ||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| |||
Sbjct  1842  TACTCCGTCGCGTATGGATTGATCGGAGGGATTGGGAGCTATGTAGTGTTGCATCTATGG  1901

Query  243   GATTGGGGAGAAAAAGGATTGGTGAAATTAGGGTTTTTgaaaaggaaagttgaagaagag  302
             |||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct  1902  GATTGGGGAGAAGAAGGTTTGGTGAAATTAGGGTTTTTGAAAAGGAAAGTTAAAGAAGAG  1961

Query  303   ga  304
             ||
Sbjct  1962  GA  1963



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 17392641154


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5