BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg949422 Length=376 Score E Sequences producing significant alignments: (Bits) Value AT5G49300.1 | Symbols: GATA16 | GATA transcription factor 16 | ... 473 4e-133 > AT5G49300.1 | Symbols: GATA16 | GATA transcription factor 16 | chr5:19984849-19985697 REVERSE LENGTH=642 Length=642 Score = 473 bits (256), Expect = 4e-133 Identities = 298/318 (94%), Gaps = 3/318 (1%) Strand=Plus/Plus Query 42 AAGAAGACTTGTGCTGATTGTGGTACAAGCAAAACCCCTCTTTGGCGTAGTGGTCCTGCT 101 ||||||||||||||||||||||| || || ||||| |||||||||||| ||||||||| | Sbjct 325 AAGAAGACTTGTGCTGATTGTGGAACCAGTAAAACTCCTCTTTGGCGTGGTGGTCCTGTT 384 Query 102 GGTCCTAAGTCGTTGTGTAACGCGTGTGGGATCAGAAACAGGAAGAAGAG-A-A-GAGGA 158 ||||| ||||||||||||||||||||||||||||||||||| |||||||| | | ||||| Sbjct 385 GGTCCAAAGTCGTTGTGTAACGCGTGTGGGATCAGAAACAGAAAGAAGAGAAGAGGAGGA 444 Query 159 ACAGAGGATAATAAGAAATTAAAGAAATCGAGTTCCGGCGGCGGAAACCCTAAATTGGGT 218 ||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||| ||| Sbjct 445 ACAGAAGATAATAAGAAATTAAAGAAATCGAGTTCTGGCGGCGGAAACCGTAAATTTGGT 504 Query 219 GAATCGTTAAAACAGAGGTTGATGGATTTTGGGATGACGAAGAGATCAACGGTGGAGAAG 278 ||||||||||||||||| ||||||||||| ||||| | |||||||||||||||||||||| Sbjct 505 GAATCGTTAAAACAGAGTTTGATGGATTTGGGGATAAGGAAGAGATCAACGGTGGAGAAG 564 Query 279 CAACGACGGAAGCTTGGTGAAGAAGAACAAGCCGCTGTGTTACTCATGGCTCTTTCTTAT 338 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 565 CAACGACAGAAGCTTGGTGAAGAAGAACAAGCCGCTGTGTTACTCATGGCTCTTTCTTAT 624 Query 339 GGCTCTGTTTACGCTTAG 356 |||||||||||||||||| Sbjct 625 GGCTCTGTTTACGCTTAG 642 Score = 69.4 bits (37), Expect = 2e-11 Identities = 39/40 (98%), Gaps = 0/40 (0%) Strand=Plus/Plus Query 3 TTGGTTGATTCAGAAACCATGAAAACAAGAGCTCAAGATA 42 ||||||||||||||||||||||||||||||||| |||||| Sbjct 250 TTGGTTGATTCAGAAACCATGAAAACAAGAGCTGAAGATA 289 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 17694247648 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5