BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg949441 Length=518 Score E Sequences producing significant alignments: (Bits) Value AT1G19740.1 | Symbols: | ATP-dependent protease La (LON) domai... 712 0.0 AT1G75460.1 | Symbols: | ATP-dependent protease La (LON) domai... 374 6e-103 > AT1G19740.1 | Symbols: | ATP-dependent protease La (LON) domain protein | chr1:6824322-6825459 FORWARD LENGTH=1138 Length=1138 Score = 712 bits (385), Expect = 0.0 Identities = 441/469 (94%), Gaps = 0/469 (0%) Strand=Plus/Plus Query 1 TCGAGTTCCGTTACTGAGTCATGATGCAAACGCTTCTCCAATTCGATCTCAGATTCGGCG 60 ||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 349 TCGAGTTTCGTTACCGAGTCATGATGCAAACGCTTCTCCAATCCGATCTCAGATTCGGCG 408 Query 61 TTGTCTACTCCGACGCCGTTTCAGGTTCCGCAGCTGGAATCGGTTGCGTCGGAGAAATCG 120 |||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||| Sbjct 409 TTGTCTACTCCGACGCTGTTTCAGGCTCCGCAGCTGGAATCGGATGCGTCGGAGAAATCG 468 Query 121 TGAAGCACGAGCGTCTCGTCGATGATCGATTCTTCTTAATCTGTAAAGGTCATGAACGAT 180 |||| ||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 469 TGAAACACGAGCGTCTAGTCGACGATCGATTCTTCTTAATCTGTAAAGGTCAGGAACGAT 528 Query 181 TTCGCGTCACGGATCTCGTCCATACGAAACCTTACCTCGTCGCGAAGGTGACGTGGCTTG 240 | || ||||| |||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 529 TCCGAGTCACCGATCTCGTCCGTACGAAACCTTACCTCGTCGCGAAAGTGACGTGGCTTG 588 Query 241 AAGATCGACCGTCTGGTGAAGAGAATCTGGACGAATTGGCGAACGAGGTTGAGGTTTTGA 300 ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||| ||| Sbjct 589 AAGATCGACCGTCCGGTGAAGAGAATCTGGACGAATTGGCGAATGAAGTTGAGGTTCTGA 648 Query 301 TGAAAGAAGTGATTCGATTGTCGAATAGATTGAATGGGAAACCAGATAAGGAATCTCAGG 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 649 TGAAAGAAGTGATTCGATTGTCGAATAGATTGAATGGGAAACCAGATAAGGAATCTCAGG 708 Query 361 ATCTGAGGAAGAATCAGTTTCCGACTCCGTTCTCGTTTTTCATTGGTAGCACGTTTGAAG 420 ||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||||| Sbjct 709 ATCTGAGGAAGAATCAGTTTCCGACTCCGTTCTCGTTCTTCGTCGGAAGCACGTTTGAAG 768 Query 421 GAGCTCCAATGGAGCAGCAAGCGTTGTTGGAGCTTGAAGACACAGCGGC 469 ||||||| ||||||||||||||||| ||||||||||||| || ||||| Sbjct 769 GAGCTCCGATGGAGCAGCAAGCGTTACTGGAGCTTGAAGATACGGCGGC 817 > AT1G75460.1 | Symbols: | ATP-dependent protease La (LON) domain protein | chr1:28327886-28329764 FORWARD LENGTH=1879 Length=1879 Score = 374 bits (202), Expect = 6e-103 Identities = 385/471 (82%), Gaps = 22/471 (5%) Strand=Plus/Plus Query 1 TCGAGTTCCGTTACTG-AGTCATGATGCAAACGCTTCTCCAATTC-GATCTCA-GATTCG 57 |||| ||||||||| | | |||||||||| ||||| |||||| || ||||| | |||||| Sbjct 375 TCGAATTCCGTTACCGTA-TCATGATGCACACGCTCCTCCAA-TCTGATCT-ACGATTCG 431 Query 58 GCGTTGTCTACTCCGACGCCGTTTCAGGTTCCGCAGCTGGAA-TCGGTTGCGTCGGAGAA 116 |||| || |||||||| |||| || || ||||| || ||| | || || || |||||| Sbjct 432 GCGTAGTTTACTCCGATTCCGTCTCTGGCTCCGCCGC-AGAAGTAGGATGTGTAGGAGAA 490 Query 117 ATCGTGAAGCACGAGCGTCTCGTCGATGATCGATTCTT-CTTAATCTGTAAAGGTCATGA 175 ||||||| ||||||||||||||||||||||||||||| || | |||| |||||||| || Sbjct 491 GTCGTGAAACACGAGCGTCTCGTCGATGATCGATTCTTTCT-AGTCTGCAAAGGTCAAGA 549 Query 176 ACGATTTCGCGTCACGGATCTCGTCCATACGAAACCTTACCTCGTCGC-GAAGGTGACGT 234 |||||| || |||||| || |||| | ||||||||| ||||| |||| |||| | |||| Sbjct 550 ACGATTCCGAGTCACGAATGTCGTTCGTACGAAACCCTACCTTGTCGGAGAAG-TCACGT 608 Query 235 GGCTTGAAGATCGACCGTCTGGTGAAGAGAATCTGGA--CGAATTGGCGAACGAGGTTGA 292 ||||||||||||| || || |||||||| ||||| || || || || || || || || Sbjct 609 GGCTTGAAGATCGTCCTTCCGGTGAAGAAAATCTTGATTCG--TTAGCTAATGAAGTCGA 666 Query 293 GGTTTTGATGAAAGAAGTGATTCGATTGTCGAATAGATTGAATGGGAAACCAGATAAGGA 352 ||| | ||||||||||||||| | || ||||||||||||||||| || | || || || Sbjct 667 AGTTCTAATGAAAGAAGTGATTAGGTTATCGAATAGATTGAATGGTAAGGCTGAGAAAGA 726 Query 353 A-TCTCAGGATCTGAGGAAGAATCAGTTTCCGACTCCGTTCTCGTTTTTCATTGGTAGCA 411 | | ||| |||||||||| ||||||||||||||| ||||| ||||| ||| | || || | Sbjct 727 AGT-TCAAGATCTGAGGAGGAATCAGTTTCCGACGCCGTTTTCGTTCTTCGTCGGAAGTA 785 Query 412 CGTTTGAAGGAGCTCCAATG-GAGCAGCAAGCGTTG-TTGGAGCTTGAAGA 460 |||||||||||||||| | | ||||||||||||||| ||| |||||||||| Sbjct 786 CGTTTGAAGGAGCTCCTA-GAGAGCAGCAAGCGTTGCTTG-AGCTTGAAGA 834 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24765434471 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5