BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg949672
Length=2482
Score E
Sequences producing significant alignments: (Bits) Value
AT5G51270.1 | Symbols: | U-box domain-containing protein kinas... 2704 0.0
AT4G25160.1 | Symbols: | U-box domain-containing protein kinas... 833 0.0
> AT5G51270.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:20835137-20838262 REVERSE LENGTH=2460
Length=2460
Score = 2704 bits (1464), Expect = 0.0
Identities = 1886/2087 (90%), Gaps = 39/2087 (2%)
Strand=Plus/Plus
Query 383 AAAGGTTGCAGTGGAACTTCAAGTCCTCGAATCAAATAGTGTTGCAGTAGCGATAACGAG 442
|||||||||||| ||||||||||| || |||||||||||||||||||| |||||||| |
Sbjct 399 AAAGGTTGCAGTAGAACTTCAAGTGCTTGAATCAAATAGTGTTGCAGTGGCGATAACCAA 458
Query 443 AGAGGTTAATGAGCATTTGATCAGCAACCTTGTCATTGGACGTTCATCGCATGGTGCCTT 502
|||||||||| |||||||||||||||| ||| |||||||||| ||||| || | |||| |
Sbjct 459 AGAGGTTAATCAGCATTTGATCAGCAATCTTATCATTGGACGCTCATCTCAAGCTGCC-T 517
Query 503 CTCGAGTTCCAGGTATCATGATATTACTGCAAAGAAATCAGCCTATGTGTCAAACTTATG 562
| | || ||| || |||||||||| || || |||||| | |||||||||||| ||
Sbjct 518 C-C----TCGAGGAATTATGATATTACAGCGTCGATATCAGCATCTGTGTCAAACTTGTG 572
Query 563 CACAGTTTATGTCGTCTCAAA---AGGAGTATATATTCTTTCAAGAGATAAATTATCATC 619
|||||| ||||| |||||||| |||||| |||||||| | | | | | | | | ||
Sbjct 573 CACAGTCTATGTTGTCTCAAACGGAGGAGTCCATATTCTTGC-A-A-A-AGA-CA-CGTC 626
Query 620 AGACACCGAGAGGAATGAAAC-TCTAAGAGATTCTGGTAATGAGAAAACTGATTCCTCCA 678
|||||| ||||||||||| || || || ||| |||||| ||||| ||| ||||||||
Sbjct 627 AGACACGGAGAGGAATGACACTTC-AATAGAATCTGGTTTTGAGAGAAC---TTCCTCCA 682
Query 679 GCTGGTCTTCTGGTTCAGGACCAAACTCAGATGTAATGTCAAACGCACTCAAATCTAACC 738
|||| ||||||||||||||| | ||||||||||| ||||| || ||||||||||||||||
Sbjct 683 GCTGTTCTTCTGGTTCAGGAGCTAACTCAGATGTTATGTCGAATGCACTCAAATCTAACC 742
Query 739 CTCATGCTCTGTCCAAGAAGAGATTGCAACATCTCCCGACAATAATAAGAGGGGTTTCTG 798
|||| |||||||||| |||||| ||||| |||||||||||||| |||||||||||||||
Sbjct 743 CTCACACTCTGTCCAATAAGAGAATGCAAAATCTCCCGACAATAGTAAGAGGGGTTTCTG 802
Query 799 TTCCTATTGATGAAACTAGTTCTGCTGAGTCAGATGAAACT-AGAAGTATGTCTTCGGAT 857
|||||| || |||||||||||| ||||||||||||||||| | ||| | ||||||||||
Sbjct 803 TTCCTA-TG--GAAACTAGTTCTACTGAGTCAGATGAAACTAAAAAG-AGGTCTTCGGAT 858
Query 858 GTTGCCGAAGAAGTAAGCAAGAGAGGTAGCCCTGAAACTTCGCGTAGTGTTTCTTGGAAT 917
| ||| || |||| |||||||||| ||||||||||||| || ||||||||||||||||||
Sbjct 859 GCTGCAGAGGAAGCAAGCAAGAGAAGTAGCCCTGAAACATCACGTAGTGTTTCTTGGAAT 918
Query 918 CATCAGTTTAGAGATTTTGATGAGAGAAAAGACGCTATGAGTTCTATGTCTATGTATAGC 977
| |||||||||||||||||| ||||||||||||||||||||||| | |||| ||||
Sbjct 919 CCTCAGTTTAGAGATTTTGACGAGAGAAAAGACGCTATGAGTTC-----C-ATGTCTAGC 972
Query 978 AACCATGAATACGGAAA---TGTTACTCAAGGTGGAGATTATTTCACAGACAACCAGGAC 1034
||| |||||||||||| |||||||| |||| | |||||||||||||||||||||
Sbjct 973 AACTTTGAATACGGAAATGTTGTTACTCCCCTTGGACACTATTTCACAGACAACCAGGAC 1032
Query 1035 ACGCTCAATGAAATTTCGAAGTTGAGAGCTGAGCTTAGACACGCTCAAGAAATGTATGCA 1094
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1033 ACGCTTAATGAAATTTCGAAGTTGAGAGCTGAGCTTAGACACGCTCATGAAATGTATGCA 1092
Query 1095 GTGGCTCAAGTAGAAACGTTGGATGCTTCTCGCAAGCTAAACGAGCTTAAGTTTGAAGAG 1154
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1093 GTGGCTCAAGTTGAAACGTTGGATGCTTCTCGTAAGCTAAACGAGCTTAAGTTTGAAGAG 1152
Query 1155 CTAACGCTAAAGGAGCACGAAATGAAGGGGTTAGCAGAAAAGGAAACACAGACGTTTGAG 1214
|||||||| ||||||||||| ||||||| ||||| ||||||||||| ||| |||||||
Sbjct 1153 CTAACGCTTCTGGAGCACGAAACGAAGGGGATAGCAAAAAAGGAAACAGAGAAGTTTGAG 1212
Query 1215 AAGAAGTTACGGGAAGAGAGAGACA-CTGAACAAAGAAGAGAAGCCGAGATAAAAGCAGC 1273
||||| | ||||||||||||| | ||| ||||||||||||||| ||||| |||||| |
Sbjct 1213 CAGAAGAGAAGGGAAGAGAGAGA-AGCTGCACAAAGAAGAGAAGCTGAGATGAAAGCAAC 1271
Query 1274 CTGTGAAGCCAAAGAGAAGGAGAAGCTTGAAGAAATTTCCCTAGTGGCTCCTAAGCTGCA 1333
| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct 1272 CCATGAAGCCAAAGAGAAGGAGAAGCTTGAAGAAAGTTCCCTTGTGGCTCCTAAGCTGCA 1331
Query 1334 ATACCAAGAGTTCACTTGGGAAGAAATCATCACCGCAACTTCATCTTTCTCTGAAGATCT 1393
||||||||||||||| ||||||||||| || | |||||||||||| |||||||||||| |
Sbjct 1332 ATACCAAGAGTTCACGTGGGAAGAAATTATTAACGCAACTTCATCATTCTCTGAAGATTT 1391
Query 1394 AAAGATCGGAATGGGAGCTTACGGGGATGTTTACAAGTGCAATCTGCATCATACAATTGC 1453
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 1392 AAAGATCGGAATGGGAGCTTACGGGGATGTTTACAAATGCAATCTGCATCATACAATCGC 1451
Query 1454 CGCTGTCAAAGTTTTGCATTCCGCTGAAAGTAGTCTATCCAAGCAATTCGATCAAGAGCT 1513
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1452 CGCTGTCAAAGTTTTGCATTCTGCTGAAAGTAGTCTATCCAAGCAATTCGATCAAGAGCT 1511
Query 1514 CGAAATCTTGAGCAAGATCAGGCACCCACACTTGGTTCTCCTTCTAGGAGCATGTCCTGA 1573
||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1512 CGAAATCTTGAGCAAGATCAGGCACCCGCACTTGGTTCTTCTTCTAGGAGCATGTCCTGA 1571
Query 1574 ACGCGGCGCTCTAGTCTATGAGTACATGGAAAACGGTAGCTTGGAAGATAGACTATTCCA 1633
| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1572 TCATGGCGCTCTAGTGTATGAGTACATGGAAAACGGTAGCTTGGAAGATAGACTGTTCCA 1631
Query 1634 AGTCAACAATAGTGAACCAATCCCGTGGTTTGTGCGATTCAGAATCATTTGGGAAGTCGC 1693
||||||| ||||| |||||||||||||||| ||||| || |||||| ||||||||||||
Sbjct 1632 AGTCAACGATAGTCAACCAATCCCGTGGTTCGTGCGGTTAAGAATCGCTTGGGAAGTCGC 1691
Query 1694 ATCAGCGCTTGTTTTCCTCCACAAATCAAAACCGACACCAATCATCCACCGCGATCTGAA 1753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1692 ATCAGCGCTTGTTTTCCTCCACAAATCAAAACCGACACCAATCATCCACCGCGATCTTAA 1751
Query 1754 ACCCGCGAACATCTTGCTTGACCACAACTTTGTCAGCAAAGTAGGAGATGTTGGTCTCTC 1813
|| || |||||||||||| | ||||||||||||||||||||||||||||||||||| ||
Sbjct 1752 GCCTGCTAACATCTTGCTTAATCACAACTTTGTCAGCAAAGTAGGAGATGTTGGTCTTTC 1811
Query 1814 CACAATGATCCAAG-T-C-GATCCATTGTTAACCAAATTCACAATGTACAAACAGACAAG 1870
|||||||||||||| | | || ||||||| ||||||||||||||||||||| ||||||||
Sbjct 1812 CACAATGATCCAAGCTGCCGACCCATTGTCAACCAAATTCACAATGTACAAGCAGACAAG 1871
Query 1871 TCCCGTGGGAACGTTATGCTATATCGATCCTGAATATCAACGAACCGGAAGGATATCTCC 1930
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1872 CCCCGTGGGAACGTTATGCTATATCGATCCCGAATATCAACGAACCGGAAGGATATCTCC 1931
Query 1931 AAAATCAGACGTTTATGCTTTAGGAATGATCATTCTGCAGCTTCTCACCGCTCAACCGGC 1990
|||||||||||| |||||||| |||||||||||||||||||||||||| | ||||| |||
Sbjct 1932 AAAATCAGACGTGTATGCTTTCGGAATGATCATTCTGCAGCTTCTCACTGGTCAACAGGC 1991
Query 1991 TATGGCACTGACATATACAGTAGAAATAGCCATGGAGAACAACAATGACGATGAGCTAAT 2050
|||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||
Sbjct 1992 TATGGCACTGACATATACAGTAGAAACAGCCATGGAGAACAACAACGACGATGAGTTAAT 2051
Query 2051 ACAGATTCTTGATAAAAAAGCGGGTAATTGGCCAATAGAAGAAACCCGCCAATTAGCCGC 2110
||||||||||||| ||||||| ||||| |||||||| |||||||| | |||||||| ||
Sbjct 2052 ACAGATTCTTGATGAAAAAGCAGGTAACTGGCCAATCGAAGAAACTAGGCAATTAGCTGC 2111
Query 2111 TTTAGCGCTCTATTGTACAGAGCTCCGTGCTAAAGACAGGCCTGATTTGGAAGATCAGAT 2170
|||||| ||| | ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2112 TTTAGCACTCCAGTGTACAGAGCTCCGTTCTAAAGACAGGCCTGATTTGGAAGATCAGAT 2171
Query 2171 TCTTCCAGTATTGGAGAGCTTGAAGAAAGTAGCTGACAAAGCAAGAAACTCGCTTTCCGC 2230
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2172 TCTTCCAGTATTGGAAAGCTTGAAGAAAGTAGCTGATAAAGCAAGAAACTCGCTTTCCGC 2231
Query 2231 TGCGCCAAGTCAACCTCCAAGTCATTTCATCTGCCCATTACTTAAGGATGTGATGAAGGA 2290
||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||
Sbjct 2232 TGCGCCAAGTCAACCTCCAAGCCATTTCTTCTGTCCATTACTTAAGGATGTGATGAAGGA 2291
Query 2291 GCCATGTATTGCGGCTGATGGGTACACGTATGACCGGAGAGCCATAGAGGAGTGGATGGA 2350
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2292 GCCATGTATTGCGGCTGATGGGTACACTTATGACCGGAGAGCCATAGAGGAGTGGATGGA 2351
Query 2351 GAACCACCGGACGTCGCCGGTGACTAATTCGCCGTTACGAAACGTGAACCTTTTGCCCAA 2410
||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||
Sbjct 2352 GAACCACCGGACGTCTCCGGTTACTAATTCGCCGTTACAAAACGTGAACCTTTTGCCCAA 2411
Query 2411 TCACACCCTTTACGCAGCCATCGTTGAATGGAGAAATAGAAATCAGT 2457
|||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 2412 TCACACTCTTTACGCAGCCATCGTCGAATGGAGAAATAGAAATCAGT 2458
Score = 466 bits (252), Expect = 5e-130
Identities = 331/368 (90%), Gaps = 10/368 (3%)
Strand=Plus/Plus
Query 21 ATGGACTCTTATTTCAAAAACTCATATCTAGACCCGAA-GCAGGTGCGTGCCCAGCTTCC 79
|||||||||| |||||||||||||||||| ||||| || || |||||||||||||||||
Sbjct 1 ATGGACTCTTTTTTCAAAAACTCATATCTGGACCCAAAGGC-TGTGCGTGCCCAGCTTCC 59
Query 80 TAAGAGGGCTAGCTCTGATCTTGCGTCTCCTTCTCAACCGCTGACCATTGCGATAGCTAT 139
||||| || | ||||||||||| |||||||| ||||| ||||| ||||| |||||||
Sbjct 60 TAAGA-GG---G--CTGATCTTGCGGCTCCTTCTGAACCGATGACCGTTGCGTTAGCTAT 113
Query 140 TAGTGGGAGCAGTAAAAGCAAGAATGTAGTTAAGTGGGCGCTCAAAAAGTTTGGTTCTGA 199
||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct 114 TAGTGGGAGCATTAAAAGCAAGAATGTAATTAAGTGGGCGCTCAACAAGTTTGGTTCTGA 173
Query 200 -AGAAAATGTCATTTTCAAGCTGATTCACATTCATCCAAAGCTTACTTCTGTACCTACAC 258
| ||||||||| |||||||||||||||||| ||||||||| ||||| || ||||||||
Sbjct 174 CA-AAAATGTCACTTTCAAGCTGATTCACATCCATCCAAAGATTACTACTCTACCTACAG 232
Query 259 CTTCGGGAAACACAGTCTCTATCTCCGAGGCACCAGAGGATGTGGCGGCTACTTATAGAC 318
||||||| |||| ||||||||| ||||||| || |||||| || |||||| |||||||||
Sbjct 233 CTTCGGGGAACATAGTCTCTATATCCGAGGAACTAGAGGAAGTAGCGGCTGCTTATAGAC 292
Query 319 AAAACGTGATGCAGGAGACAAAAGAAACTCTTCTTAAACCTTTCAAGAAAATGTGCGAGC 378
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 293 AAAAAGTGATGCAGGAGACAAAAGAAACTCTTCTTAAACCTTTCAAGAAAATGTGCGAGC 352
Query 379 GGAAAAAG 386
||||||||
Sbjct 353 GGAAAAAG 360
> AT4G25160.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr4:12903191-12907338 REVERSE LENGTH=2832
Length=2832
Score = 833 bits (451), Expect = 0.0
Identities = 979/1232 (79%), Gaps = 43/1232 (3%)
Strand=Plus/Plus
Query 1229 AGAGAGAGACACTGAACAAAGAAGAGAAGCCGAGATAAAAGCAGC-CTGTGA-AGCCAAA 1286
||||||||| | || || |||||||||||||| | ||| | || | |||| | | |||
Sbjct 1445 AGAGAGAGAAATTGCGCAGAGAAGAGAAGCCGAAAGGAAATCCGCAC-GTGATA-CTAAA 1502
Query 1287 GAGAAGGAGAAGCTTGAAGAAATTTCCCTAGTGG-CTCCTAAGCTGCAATACCAAG-AGT 1344
||||| |||||||| || | | | || | || ||||| |||||||||| | || | |
Sbjct 1503 GAGAAAGAGAAGCTCGAGGGCA---CTCTCG-GGTCTCCTCAGCTGCAATATC-AGCACT 1557
Query 1345 TCACTTGGGAAGAAATCATCACCGCAACTTCATCTTTCTCTGAAGATCTAAAGATCGGAA 1404
| ||||||||||||| || | || |||||||| ||||| ||||| || ||||||||||
Sbjct 1558 TTGCTTGGGAAGAAATTATGGCTGCCACTTCATCATTCTCAGAAGAACTGAAGATCGGAA 1617
Query 1405 TGGGAGCTTACGGGGATGTTTACAAGTGCAATCTGCATCATACAATTGCCGCTGTCAAAG 1464
||||||||||||| | |||||||||||| |||||||||||||||| ||| | ||||||||
Sbjct 1618 TGGGAGCTTACGGAGCTGTTTACAAGTGTAATCTGCATCATACAACTGCAGTTGTCAAAG 1677
Query 1465 TTTTGCATTCCGCTGAAAGT-AGTCTATCCAAGCAATTCGATCAAGAGCTCGAAATCTTG 1523
||||||| || ||||||| | | || ||||| |||||| | ||||||||||||||||||
Sbjct 1678 TTTTGCAGTCAGCTGAAAATCA-ACTTTCCAAACAATTCCAACAAGAGCTCGAAATCTTG 1736
Query 1524 AGCAAGATCAGGCACCCACACTTGGTTCTCCTTCTAGGAGCATGTCCTGAACGCGGCGCT 1583
|||||||| ||||| ||||| |||||||||||||||||||| || || || | || |||
Sbjct 1737 AGCAAGATTAGGCATCCACATTTGGTTCTCCTTCTAGGAGCGTGCCCGGAGCAAGGTGCT 1796
Query 1584 CTAGTCTATGAGTACATGGAAAACGGTAGCTTGGAAGATAGACTATTCCAAGTCAACAAT 1643
|||| ||||||||||||||||||||||||||||| || ||||| ||||| ||||||||
Sbjct 1797 TTAGTTTATGAGTACATGGAAAACGGTAGCTTGGAGGACAGACTTTTCCAGGTCAACAAC 1856
Query 1644 AGTGAACCAATCCCGTGGTTTGTGCGATTCAGAATCATTTGGGAAGTCGCATCAGCGCTT 1703
||| ||| |||||||||||| ||| || || || ||||||||| ||| | || |||
Sbjct 1857 AGTCCGCCACTCCCGTGGTTTGAGCGGTTTAGGATTGCTTGGGAAGTTGCAGCGGCTCTT 1916
Query 1704 GTTTTCCTCCACAAATCAAAACCGACACCAATCATCCACCGCGATCTGAAACCCGCGAAC 1763
|| ||||||||||||||||| || | ||||||||| ||||| ||||| ||||| || |||
Sbjct 1917 GTCTTCCTCCACAAATCAAAGCCTAAACCAATCATTCACCGTGATCTTAAACCTGCAAAC 1976
Query 1764 ATCTTGCTTGACCACAACTTTGTCAGCAAAGTAGGAGATGTTGGTCTCTCCACAATGATC 1823
||||| ||||| |||||||||||||||||||| ||||| || || ||||| || ||| |
Sbjct 1977 ATCTTACTTGATCACAACTTTGTCAGCAAAGTTGGAGACGTGGGACTCTCAACGATGGTT 2036
Query 1824 CAAGTCGATCCAT-TGTTAACCAAATTCACAATGTACAAACAGACAAGTCCCGTGGGAAC 1882
||||||||||| | | | ||| |||||||| || |||||||| ||||| |||||||||||
Sbjct 2037 CAAGTCGATCC-TCTATCAACTAAATTCACTATATACAAACAAACAAGCCCCGTGGGAAC 2095
Query 1883 GTTATGCTATATCGATCCTGAATATCAACGAACCGGAAGGATATC-TCCAAAATCAGACG 1941
|||||||||||| ||||| |||||||| || || ||||||||||| || ||| |||||
Sbjct 2096 GTTATGCTATATTGATCCGGAATATCAGCGCACTGGAAGGATATCATCGAAA-TCAGATA 2154
Query 1942 TTTA-TGCTTTAGGAATGAT-CATTCTGCAGCTTCTCACCGCTCAACCGGCTATGGCACT 1999
| || | |||| |||||||| | |||| ||||||||||| || |||| ||||| ||| |
Sbjct 2155 TCTACTCCTTT-GGAATGATTC-TTCTTCAGCTTCTCACAGCAAAACCTGCTATTGCATT 2212
Query 2000 GACATATA-CAGTAGAAATAGCCATGGAGAACAACAATGACGATGAGCTAATACAGATTC 2058
|||| || | || || | || ||||| | || |||| | | || || |||| |
Sbjct 2213 GACACATTTC-GTTGAGAGCGCAATGGATAGTAATGATGA-GTTC--CT--TA-AGAT-C 2264
Query 2059 TT-GATAAAAAAGCGGGTAATTGGCCAATAGAAGAAACCCGCCAATTAGCCGCTTTAGCG 2117
|| ||| | ||||| ||||| ||||| || ||||||||||| |||| ||||| |||||
Sbjct 2265 TTAGATCAGAAAGCCGGTAACTGGCCGATTGAAGAAACCCGGGAATTGGCCGCATTAGCT 2324
Query 2118 CTCTATTGTACAGAGCTCCGTGCTAAAGACAGGCCTGATTTGGAAGATCAGATTCTTCCA 2177
| | |||||||||||| || | ||||| || ||||||||| |||||||||||||||||
Sbjct 2325 TTGTGTTGTACAGAGCTACGCGGGAAAGATAGACCTGATTTGAAAGATCAGATTCTTCCA 2384
Query 2178 GTATTGGAGAGCTTGAAGAAAGTAGCTGACAAAG-CAAGAAACTCGCTTTCCGCTGCGCC 2236
| | || | | | |||||||||||||| |||| |||| ||||| |||||| |||
Sbjct 2385 GCGCTCGAAAACCTAAAGAAAGTAGCTGA-AAAGGCAAGGAACTCATTTTCCG--GCGT- 2440
Query 2237 AA-GTCA-A-CCTCCAAGTCATTTCATCTGCCCATTACTTAAGGATGTGATGAAGGAGCC 2293
| | || | ||||| | ||||||||||||||||||||||||||| |||||||| |||||
Sbjct 2441 ATCGACACAGCCTCCCACTCATTTCATCTGCCCATTACTTAAGGACGTGATGAACGAGCC 2500
Query 2294 ATGTATTGCGGCTGATGGGTACACGTATGACCGG-AGAGCCATAGAGGAGTGGATGGAGA 2352
|| |||| || || || ||||| || ||||| | || |||||||||||| | ||
Sbjct 2501 GTGCGTTGCAGCAGACGGATACACATACGACCGTCAT-GCGATAGAGGAGTGGCTTAAGG 2559
Query 2353 ACCACCGGACGTCGCCGGTGACTAATTCGCCGTTACGAAA-CGTGAACCTTTTGCCCAAT 2411
| ||| || |||||| |||| |||| ||||| | | | | ||||||||| ||||||
Sbjct 2560 AGCACAACACATCGCCGATGACGGATTCACCGTTGC-ATAGCAAGAACCTTTTACCCAAT 2618
Query 2412 CACACCCTTTACGCAGCCATCGTTGAATGGAG 2443
| || |||||| |||||||| | ||||||||
Sbjct 2619 TATACTCTTTACACAGCCATCATGGAATGGAG 2650
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 123159845065
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5