BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg949680

Length=374
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G76140.1 | Symbols:  | Prolyl oligopeptidase family protein ...   279    9e-75


> AT1G76140.1 | Symbols:  | Prolyl oligopeptidase family protein 
| chr1:28571130-28575036 FORWARD LENGTH=2629
Length=2629

 Score =  279 bits (151),  Expect = 9e-75
 Identities = 178/190 (94%), Gaps = 5/190 (3%)
 Strand=Plus/Plus

Query  95    TGGATCACA-CCATGTTTGCTCTATGCATATGGT-GGTTTAACATAAGCATAACACCGTC  152
             ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct  1680  TGGATCACACCCATGTTTGCTCTATGCATATGGTGGGTTTAACATAAGCATAACACCGTC  1739

Query  153   TTTCAGTGGAAGCCACATTGTGCTTAGCAAGCATCTCGGTGTTGTTTTCTGCTTTGCAAA  212
             ||||||||  ||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1740  TTTCAGTGCCAGCCGTATTGTGCTTAGCAAGCATCTCGGTGTTGTTTTCTGCTTTGCAAA  1799

Query  213   CATTCGGGGGTGGTGG--AGTATGGTTACGAATGGCACAAAGCAGGTTCACTTGCCAAAA  270
             ||||||||| ||||||  |||||||| | |||||||||||||||||||||||||||||||
Sbjct  1800  CATTCGGGG-TGGTGGGGAGTATGGTGAGGAATGGCACAAAGCAGGTTCACTTGCCAAAA  1858

Query  271   TGCAGAACTG  280
              |||||||||
Sbjct  1859  AGCAGAACTG  1868



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 17593712150


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5