BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg949805
Length=1501
Score E
Sequences producing significant alignments: (Bits) Value
AT5G52450.1 | Symbols: | MATE efflux family protein | chr5:212... 2386 0.0
AT2G34360.1 | Symbols: | MATE efflux family protein | chr2:145... 1216 0.0
AT1G73700.1 | Symbols: | MATE efflux family protein | chr1:277... 785 0.0
> AT5G52450.1 | Symbols: | MATE efflux family protein | chr5:21288898-21291862
REVERSE LENGTH=1718
Length=1718
Score = 2386 bits (1292), Expect = 0.0
Identities = 1435/1505 (95%), Gaps = 6/1505 (0%)
Strand=Plus/Plus
Query 1 CTTTGCTATTTCTC--aaaaaaaTGAGGGACGATAGAGAAAGAGGAGAGGATGAATTGTC 58
|||||||||||||| ||||||||||||||||| |||||||||||||||| ||| |||||
Sbjct 92 CTTTGCTATTTCTCAAAAAAAAATGAGGGACGACAGAGAAAGAGGAGAGGGTGATTTGTC 151
Query 59 ATGGCCTTTGATCGGAGAGAAAAGTAGTGTCAAGGAGGAAGTGAAGAAGCAGATATGGCT 118
|||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct 152 ATGGCCTTTGATCGGAGAGAAAAGTAGTGTCAAGGAAGAAGTGAAGAAGCAGCTATGGCT 211
Query 119 TTCGGGTCCACTCATCACCGTGAGCCTTCTTCAGTTTTGTCTACAAGTTATCTCCGTCAT 178
||| || ||||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct 212 TTCAGGCCCACTCATCGCCGTGAGTCTTCTTCAGTTTTGTCTACAAGTTATCTCCGTCAT 271
Query 179 GTTCGTCGGTCATCTTGGCTCTCTTCCTCTCTCCGCCGCCTCTATCGCCACTTCTTTCGC 238
|||||| || ||||||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct 272 GTTCGTTGGCCATCTTGGCTCTCTTCCTCTCTCCGCCGCATCCATCGCCACCTCTTTCGC 331
Query 239 CTCAGTCACCGGTTTCAGCTTCCTCATGGGAACAGCAAGTGCCTTAGATACACTTTGTGG 298
||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 332 CTCCGTCACCGGTTTCAGCTTCCTCATGGGAACAGCAAGTGCGTTAGATACGCTTTGTGG 391
Query 299 CCAAGCTTACGGAGCAAAGAAGTACGGAATGTTAGGAATACAAATGCAAAGAGCAATGTT 358
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 392 CCAAGCGTACGGAGCAAAGAAGTACGGAATGTTAGGAATACAAATGCAAAGAGCTATGTT 451
Query 359 TGTTCTTACACTAGCTTCTATTCCTCTCTCCATCATATGGGCTAACACAGAGCATCTTCT 418
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 452 TGTTCTTACACTAGCTTCTATTCCTCTCTCCATCATTTGGGCTAACACAGAGCACCTTCT 511
Query 419 CGTCTTCTTTGGACAAAACAAATCCATTGCTACACTCGCTGGCTCCTACGCAAAATTCAT 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 512 CGTCTTCTTTGGACAAAACAAATCCATTGCTACACTCGCTGGCTCCTACGCAAAATTCAT 571
Query 479 GATCCCAAGCATCTTCGCCTACGGTCTCCTTCAATGCTTTAACAGGTTTTTGCAGGCCCA 538
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 572 GATCCCAAGCATCTTCGCCTACGGTCTTCTTCAATGCTTTAACAGGTTCTTGCAGGCCCA 631
Query 539 AAACAATGTGTTTCCTGTGGTTTTCTGCTCTGGAGTCACCACTTCTCTTCATGTCCTCCT 598
|||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||
Sbjct 632 AAACAATGTGTTTCCTGTGGTTTTCTGCTCTGGAGTAACAACTTCTCTACATGTCCTCCT 691
Query 599 TTGTTGGATCTTGGTTTTTAAATCTGGTTTAGGGTTTCAAGGAGCTGCTCTTGCCAACTC 658
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 692 TTGTTGGGTCTTGGTTTTCAAATCTGGTTTAGGGTTTCAAGGAGCTGCTCTTGCCAACTC 751
Query 659 CATTTCGTATTGGCTTAATGTCATTCTCTTGTTCTGTTACGTTAAGTTTTCGCCTTCTTG 718
|||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct 752 CATTTCGTATTGGCTTAATGTCGTTCTCTTGTTCTGTTACGTCAAGTTTTCGCCTTCTTG 811
Query 719 CTCACTGACTTGGACCGGTTTCTCTAAGGAGGCTCTACGCGATATCCTCCCTTTTCTGAG 778
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 812 CTCACTAACTTGGACCGGTTTCTCTAAGGAGGCTCTACGCGATATCCTCCCTTTTCTGAG 871
Query 779 ACTAGCTGTTCCTTCTGCACTTATGGTCTGCTTAGAGATGTGGTCCTTTGAATTTTTAGT 838
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 872 ACTAGCTGTTCCTTCTGCACTTATGGTCTGCTTAGAGATGTGGTCCTTTGAACTTTTAGT 931
Query 839 TCTCTTATCAGGACTTCTTCCAAACCCGGTTCTAGAAACTTCTGTTCTCTCTATCTGCCT 898
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 932 TCTCTTATCAGGACTTCTTCCAAACCCGGTTCTAGAAACTTCTGTTCTCTCAATCTGCCT 991
Query 899 TAATACAGCAGGAACAATGTGGATGATCCCATTTGGTCTCAGTGGCGCTGCAAGCACGAG 958
||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 992 TAATACATCAGGAACAATGTGGATGATCCCATTTGGTCTAAGTGGCGCTGCAAGCACGAG 1051
Query 959 GATCTCGAATGAGTTAGGAGCGGGTAATCCGAAAGTGGCTAAGCTTGCGGTGCGTGTGGT 1018
|||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1052 GATCTCAAATGAATTAGGAGCGGGTAACCCGAAAGTGGCTAAGCTTGCGGTGCGTGTGGT 1111
Query 1019 CATATGCATTGCAGTCGCAGAAAGTATAGTGATCGGATCAATTTTGATATTGATAAGGAA 1078
||| ||||||||||| |||||||||||||||||||||||| | |||||||||||||||||
Sbjct 1112 CATTTGCATTGCAGTAGCAGAAAGTATAGTGATCGGATCAGTCTTGATATTGATAAGGAA 1171
Query 1079 TATATGGGGATTGGCTTATAGTAGTGAACCGGAAGTAGTCA-CTTACGTAGCCTCCATGA 1137
|||||||||||| |||||||||||||||| |||||||||| || |||||||||| ||||
Sbjct 1172 TATATGGGGATTAGCTTATAGTAGTGAACTAGAAGTAGTCAGCT-ACGTAGCCTCGATGA 1230
Query 1138 TGCCGATTCTCGCCTTAGGCAATTTTCTAGACAGTCTTCAATGCGTTCTCTCAGGGGTTG 1197
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1231 TGCCAATTCTCGCCTTAGGAAATTTTCTAGACAGTCTTCAATGCGTTCTCTCAGGGGTTG 1290
Query 1198 CTAGAGGATGTGGATGGCAGAAGATAGGAGCAATCATTAACCTTGGTTCATATTATCTTG 1257
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1291 CTAGAGGATGTGGATGGCAGAAGATAGGAGCAATCATTAATCTTGGTTCATATTATCTTG 1350
Query 1258 TTGGAGTTCCTTCAGGCTTGTTACTTGCTTTCCACTTTCACGTTGGTGGTCGGGGGCTTT 1317
|||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1351 TTGGAGTTCCTTCAGGATTGTTACTTGCTTTTCACTTTCACGTTGGTGGTCGGGGGCTTT 1410
Query 1318 GGCTTGGAATCATATGTGCCCTCGTTGTTCAAGTTTTTGGTCTTGCCCTCGTCACCATTT 1377
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 1411 GGCTTGGAATCATATGTGCCCTCGTTGTTCAAGTTTTTGGTCTTGGCCTCGTCACTATTT 1470
Query 1378 TTACAAATTGGGATGAAGAGGCCAAGAAAGCTACAAATAGAATTGAGTCTTCTTCAAGTG 1437
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1471 TTACAAATTGGGATGAAGAGGCCAAGAAAGCTACAAACAGAATTGAGTCTTCTTCAAGTG 1530
Query 1438 T-AAAGGATTCTGCACTTGATGATGGGTCAATTGTTGTATTCTGAGAGCCATTGTGTGTT 1496
| |||| ||| |||| | ||||| | ||| |||||||||| ||||| |||||||||||
Sbjct 1531 TGAAAG-ATTTTGCAGTCGATGACAGATCAGTTGTTGTATTTTGAGAACCATTGTGTGTG 1589
Query 1497 TTTTG 1501
|||||
Sbjct 1590 TTTTG 1594
> AT2G34360.1 | Symbols: | MATE efflux family protein | chr2:14507294-14510231
FORWARD LENGTH=1443
Length=1443
Score = 1216 bits (658), Expect = 0.0
Identities = 1217/1475 (83%), Gaps = 85/1475 (6%)
Strand=Plus/Plus
Query 40 GAG-GAGAGGATGA-ATTGTCATGGCCTTTGATC---G-G--AGAG-A-A-AAGTAG--- 85
||| |||||||| | |||||||||||| ||||| | | |||| | | ||||||
Sbjct 10 GAGAGAGAGGAT-ATGTTGTCATGGCCTCTGATCGGAGAGAAAGAGAAGAGAAGTAGATT 68
Query 86 TGTCAAGGAGGAAGTGAAGAAGCAGATA-TGGCTT-TCGGGTCCACTCATCACCGTGAGC 143
||| |||||||||||| |||||||| || | | || || || ||||| ||| | |||||
Sbjct 69 TGTAAAGGAGGAAGTGGAGAAGCAGCTACT-G-TTGTCTGGACCACTAATCGCAGTGAGT 126
Query 144 CTTCTTCAGTTTTGTCTACAAGTTATCTCCGTCATGTTCGTCGGTCATCTTGGCTCTCTT 203
||||||||||||||||| ||| | ||||| |||||||||||||| |||||||||||||||
Sbjct 127 CTTCTTCAGTTTTGTCTGCAAATAATCTCAGTCATGTTCGTCGGCCATCTTGGCTCTCTT 186
Query 204 CCTCTCTCCGCCGCCTCTATCGCCACTTCTTTCGCCTCAGTCACCGGTTTCAGCTTCCTC 263
||||| |||||||||||||| ||||| || |||||||| |||||||| |||| |||||||
Sbjct 187 CCTCTATCCGCCGCCTCTATTGCCACCTCCTTCGCCTCCGTCACCGGCTTCACCTTCCTC 246
Query 264 ATGGGAACAGCAAGTGCCTTAGATACACTTTGTGGCCAAGCTTACGGAGCAAAGAA-GTA 322
||||||||||||||||| | || ||| ||||||| ||| | ||||||||||| || |||
Sbjct 247 ATGGGAACAGCAAGTGCGATGGACACAGTTTGTGGTCAATCGTACGGAGCAAA-AATGTA 305
Query 323 CGGAATGTTAGGAATACAAATGCAAAGAGCAATGTTTGTTCTTACACTAGCT-TCTATTC 381
||| |||||||| ||||| ||||||||||||||| |||||||||| || | ||| |||
Sbjct 306 CGGTATGTTAGGCATACAGATGCAAAGAGCAATGCTTGTTCTTACTCT-TTTATCTGTTC 364
Query 382 CTCTCTCCATCATATGGGCTAACACAGAGCATCTT-CTCGTCTTCTTTGGACAAAACAAA 440
||||||||||| | ||||| ||||||||||| ||| || |||||||| || ||| ||||
Sbjct 365 CTCTCTCCATCGTTTGGGCCAACACAGAGCA-CTTCCTGGTCTTCTTCGGCCAAGACAAG 423
Query 441 TCCATTGCTACA-CTCGCTGGCTCCTACGCAAAATTCATGATCCCAAGCATCTTCGCCTA 499
|||||||| ||| ||| ||||||||||||| | |||||||||||| ||||||||||||||
Sbjct 424 TCCATTGC-ACACCTCTCTGGCTCCTACGCCAGATTCATGATCCCTAGCATCTTCGCCTA 482
Query 500 CGGTCTCCTTCAATGCT-TTAACAGGTTTTTGCAGGCCCAAAACAATGTGTTTCCTGTGG 558
|||||| |||||||| | | ||||||||||||||||| || |||||||| |||||||||
Sbjct 483 CGGTCTTCTTCAATG-TCTCAACAGGTTTTTGCAGGCGCAGAACAATGTAATTCCTGTGG 541
Query 559 TTTTCTGCTCTGGAGTCACCACTTCTCTTCATGTCCTCCTTTGTTGGATCTTGGTTTTTA 618
|| |||| ||||||||||||||||||||||| || || | |||||| ||||||| || |
Sbjct 542 TTATCTGTTCTGGAGTCACCACTTCTCTTCACGTGATCATCTGTTGGGTCTTGGTGTTGA 601
Query 619 AATCTGGTTTAGGGTTTCA-AGGAGCTGCTCTTGCCAACT-CCATTTCGTATTGGCTTAA 676
||||||||||||||||| | |||||||||| | || || | | || ||||||||||| ||
Sbjct 602 AATCTGGTTTAGGGTTT-AGAGGAGCTGCTGTCGCTAA-TGCGATCTCGTATTGGCTCAA 659
Query 677 TGTCATTCTCTTGTTC-TGTTACGTTAAGTTTTCGCCTTCTTGCTCACTGACTTGGACCG 735
||||||||||||| || |||||||| |||||||||||||||||||| ||||| |||||||
Sbjct 660 TGTCATTCTCTTG-TCGTGTTACGTCAAGTTTTCGCCTTCTTGCTCCCTGACCTGGACCG 718
Query 736 GTTTCTCTAAGGAGGCTCTACGCGATATCCTCCCTTTTCTGAGACTAGCTGTTCCTTCTG 795
||||||||||||| |||| ||||||||| |||||||| ||| ||||| | |||||||||
Sbjct 719 GTTTCTCTAAGGAAGCTCGGCGCGATATCATCCCTTTTATGAAACTAGTTATTCCTTCTG 778
Query 796 CACTTATGG--T-CTGCTTAGAGATGTGGTCCTTTGAATTTTTAGTTCTCTTATCAGGAC 852
|| |||||| | | |||||||||||||||| ||||| |||| ||||||| |||||||
Sbjct 779 CATTTATGGTTTGCAGCTTAGAGATGTGGTCATTTGAGCTTTTGGTTCTCTCGTCAGGAC 838
Query 853 TTCTTCCAAACCCGGTTCTAGAAACTTCTGTTCTCTCTATCTGCCTTAATACAGCAGGAA 912
||||||| |||||||||||||||||||| || || | || | | || | |
Sbjct 839 TTCTTCCGAACCCGGTTCTAGAAACTTC--TTGTC-C--TC-G-----A-AC--C--G-- 880
Query 913 CAATGTGGATGATCCCATTTGGTCTCAGTGGCGCTGCAAGCACGAGGATCTCGAATGAGT 972
| ||||||||||| ||||| || |||||||| || ||||| ||| | || |||||||
Sbjct 881 ---TCTGGATGATCCCGTTTGGCCTTAGTGGCGCCGCTAGCACAAGGGTGTCAAATGAGT 937
Query 973 TAGGAGC-GGGTAATCCGAAAGTGGCTAAGCTTGCGGTGCGTGTGGTCAT-ATGC-ATTG 1029
||||| | ||| |||||||||| ||||||||||||||| || |||||| | | || ||
Sbjct 938 TAGGATCAGGG-AATCCGAAAGGGGCTAAGCTTGCGGTTCGCGTGGTCTTGA-GCTTTTC 995
Query 1030 CAGTCGCAGAAAGTATAGTGA-TCGGATCAATTTTGATA-TTGATAAGGAATATATGGGG 1087
|| ||| ||| |||||| | | | ||| | | |||||| || |||||||| || |||||
Sbjct 996 CA-TCGTAGAGAGTATACT-AGTTGGAACGGTCTTGATACTT-ATAAGGAAGATCTGGGG 1052
Query 1088 ATTGGCTTATAGTAGTGAACCGGAAGTAGTCA-CTTACGTAGCCTCCATGATGCCGATTC 1146
||| || || |||||||| ||||||||||||| | | |||||||| ||| |||||||||
Sbjct 1053 ATTCGCATACAGTAGTGACCCGGAAGTAGTCAGC-CATGTAGCCTCGATGTTGCCGATTC 1111
Query 1147 TCGCCTTAGG-CAATTTTCTAGACAGTCTT-CAATGCGTTCTCTCAGGGGTTGCTAGAGG 1204
| |||||||| | ||| || ||||| ||| ||| |||||| ||||||||||| |||||
Sbjct 1112 TTGCCTTAGGTC-ATTCCCTGGACAG-CTTCCAAACCGTTCTTTCAGGGGTTGCGAGAGG 1169
Query 1205 ATGTGGATGGCAGAAGATAGGAGCAATCATTAACCTTGGTTCATATTATCTTGTTGGAGT 1264
||||||||||||||||||||||||| | | || ||||| |||||||||||||| |||||
Sbjct 1170 ATGTGGATGGCAGAAGATAGGAGCATTTGTGAATCTTGGATCATATTATCTTGTCGGAGT 1229
Query 1265 TCC-TTCAGGCTTGTTACTTGCTTTCCACTTTCACGTTGGTGGTCGGGGGCTTTGGCTTG 1323
||| ||| || || ||||||| ||| ||||||||||| |||||||||||||||||| |||
Sbjct 1230 TCCGTTC-GGTTTATTACTTGGTTTTCACTTTCACGTCGGTGGTCGGGGGCTTTGG-TTG 1287
Query 1324 G-AATCATATGTGCCCTCGTTGTTCAAGTTTT-TGGTCTTGCCCTCGTCACCATTTTTAC 1381
| ||| |||||||| ||| | ||||||| | | || |||| ||||| ||||| |||||||
Sbjct 1288 GGAATTATATGTGCACTCATCGTTCAAGGTGTATG-TCTTTCCCTCATCACCTTTTTTAC 1346
Query 1382 AAATTGGGATGAAGAGGCCAAGAAAGCTACAAATAGAATTGAGTCTTCTTCA-AGTGTAA 1440
||||||||||||||||| |||||||||||| | || | ||||||||||| | ||||
Sbjct 1347 AAATTGGGATGAAGAGGTCAAGAAAGCTACCAGCCGAGCTAAGTCTTCTTCAGAA-GTAA 1405
Query 1441 AGGA-TTCTGCACTTGATGATGGGTCAATTGTTGT 1474
|||| || |||| | || | ||||||||| ||||
Sbjct 1406 AGGAATT-TGCAGTAGACAACGGGTCAATTCTTGT 1439
> AT1G73700.1 | Symbols: | MATE efflux family protein | chr1:27717380-27719648
REVERSE LENGTH=1623
Length=1623
Score = 785 bits (425), Expect = 0.0
Identities = 1064/1367 (78%), Gaps = 66/1367 (5%)
Strand=Plus/Plus
Query 85 GTGTCAAGGAGGAAGTGAAGAAGCAGATATGGCTTTCGGGTCCACTCATCACCGTGAGCC 144
|||| |||||||| |||||||||||| |||||||||| | ||||||||| || ||||
Sbjct 77 GTGTGAAGGAGGAGGTGAAGAAGCAGCTATGGCTTTCTGCTCCACTCATTGGTGTTAGCC 136
Query 145 TTCTTCAGTTTTGTCTACAAGTTATCTCCGTCATGTTCGTCGGTCATCTTGGCTCTCTTC 204
||||||| | | ||| ||||| ||||||||||||||||| || ||||||||||||||||
Sbjct 137 TTCTTCAATACTCTCTCCAAGTCATCTCCGTCATGTTCGTTGGCCATCTTGGCTCTCTTC 196
Query 205 CTCTCTCCGCCGCCTCTATCGCCA-CTTCTTTCGCCTCAGTCACCGGTTTCAGCTTCCTC 263
||||||| |||||||||||||||| || |||| ||||| || ||||| |||| |||||||
Sbjct 197 CTCTCTCTGCCGCCTCTATCGCCACCTCCTTT-GCCTCCGTTACCGGCTTCACCTTCCTC 255
Query 264 ATGGGAACAGCAAGTGCCTTAGATACACTTTGTGGCCAAGCTTACGGAGC-AAAGAAGTA 322
|||||||||||||||| || || ||||| |||||||||||||||||||| ||| | ||
Sbjct 256 TTGGGAACAGCAAGTGCATTGGAGACACTATGTGGCCAAGCTTACGGAGCAAAACTA-TA 314
Query 323 CGGAATGTTAGGAATACAAATGCAAAGAGCAATGTTTG---TTCTTACACTAGCTTCTAT 379
|||| || ||||| |||||||| ||||||||||||| |||||| ||| | ||| |
Sbjct 315 TGGAAAATTGGGAATTCAAATGCAGAGAGCAATGTTTGTACTTCTTATACT--C-TCTGT 371
Query 380 TCCTCTCTCCATCATATGGGCTAACACAGAGCATCTTCTCGTCTTCTTTGGA-CAAAACA 438
||||||||| ||||| |||||||||||||| || ||||||| || | | ||| |||
Sbjct 372 TCCTCTCTCAATCATTTGGGCTAACACAGAACAGATTCTCGTATT-GGTCCATCAAGACA 430
Query 439 AATCCATTGCTACACTCGCTGGCTCCTACGCAAAATTCATGATCCCAAGCATCTTCGCCT 498
| |||||||| | | |||||||||||||| |||| ||||||||| ||| |||||||||
Sbjct 431 AGTCCATTGCAAGTGTTGCTGGCTCCTACGCTAAATACATGATCCCGAGCCTCTTCGCCT 490
Query 499 ACGGTCTCCTTCAATGCT-TTAACAGGTTTTTGCAGGCCCAAAACAATGTGTTTCCTGTG 557
|||| || |||||||| | | |||||||| ||||| || || ||||||||||| |||||
Sbjct 491 ACGGACTGCTTCAATG-TATCAACAGGTTCTTGCAAGCGCAGAACAATGTGTTCCCTGT- 548
Query 558 GTTT-TCTGCTCTGG-AGTCACCACTTCTCTTCATGTCCTCCTTTGTTGGATCTTGGTTT 615
||| |||||||||| | |||| || | ||||||| | || || |||||| | || || |
Sbjct 549 CTTTGTCTGCTCTGGTA-TCACTACATGTCTTCATTTGCTTCTCTGTTGGTTGTTTGTGT 607
Query 616 TTAA-ATCTGGTTTAGGGTTTCA-AGGAGCTGCTCTTGCCAACTCCATTTCGTATTGGCT 673
| || | |||||||| || | || ||||||||||||||| | || | || || ||| |
Sbjct 608 TGAAGA-CTGGTTTA-GGATACAGAGGAGCTGCTCTTGCTATTTCGGTCTCTTACTGG-T 664
Query 674 T-AATGTCATTCTCTTGTTC-TGTTACGTTAAGTTTTCGCCTTCTTGCTCAC-TGACTTG 730
| || ||||||||| | || ||||| || |||||||||||||||||||| | | | |||
Sbjct 665 TCAACGTCATTCTCCT-CTCGTGTTATGTCAAGTTTTCGCCTTCTTGCTCGCAT-AGTTG 722
Query 731 GACC-GGTTTCTCTAAGGAGGCTCTACGCG-A-TATCCTCCCTTT-TCTGAGACTAGCTG 786
|||| ||||| || || |||||| | | | | | | | ||| ||| | | | |||
Sbjct 723 GACCGGGTTT-TCGAAAGAGGCTTTTCAAGAACT-TTAT-GATTTCTCT-AAAATTGCTT 778
Query 787 TTCCTTCTGCACTTATGGTCTGCTTAGAGATGTGGTCCTTTGAATTTTTAGTTCTCT-TA 845
||||||| || | |||||||| || ||| | |||||||| || || | ||||| |
Sbjct 779 TTCCTTCAGCGGTCATGGTCTGTTTGGAGCTTTGGTCCTTCGAGCTTCTGGTTCT-TGCC 837
Query 846 TCAGGACTTCTTCCAAACCCGGTTCTAGAAACTTCTGTTCTCTCTATCTGCCTTAATACA 905
||||| |||||||| ||||||||| |||||||||| || || || ||||| || |||||
Sbjct 838 TCAGGCCTTCTTCCTAACCCGGTTTTAGAAACTTCGGTGCTTTCAATCTGTCTAAATACT 897
Query 906 GCAGGAACAATGTGG-ATGATCCCATTTGGTCTCAGTGGCGCTGCAAGCACGAGGATCTC 964
| |||||| ||| | ||| | ||||||| ||||||||||||||| ||| ||||
Sbjct 898 TCCCTAACAATCTGGCA-GATTTCGGTTGGTCTTGGTGGCGCTGCAAGCATAAGGGTCTC 956
Query 965 GAATGAGTTAGGAGC-GGGTAATCCGA-AAGTGGCTAAGCTTGCGGTGCGTGTGGTCATA 1022
|| ||||||||||| ||| ||||| | ||||||| || || || || ||| | ||
Sbjct 957 AAACGAGTTAGGAGCAGGG-AATCC-ACAAGTGGCAAAACTGGCTGTATATGTCATTGTA 1014
Query 1023 TGCATTGCAGTCGCAGAAAGTATAGTGATCGGATCAATTTTGATATTGATAAGGAATAT- 1081
|||| ||||| || || | || ||| | | | || ||||| | | ||| |||| ||
Sbjct 1015 GGCATAGCAGTAGCCGAGGGAATTGTGGTTGTAACAGTTTTGTTGTCGATTCGGAAGATC 1074
Query 1082 AT-GGGGATTGGCTTATAGTAGTGAACCGGAAGT-AGTCACTTACGTAGCCTCCATGATG 1139
| || | | |||| ||| || || ||| || | | || | || | || || |||||
Sbjct 1075 TTAGGTCA-T-GCTTTTAGCAGCGACCCGAAAATCA-TCGCATATGCCGCATCAATGATA 1131
Query 1140 CCGATTCTCGCCT-TAGGCAATTTTCTAGACAGTCTT-CAATGCGTTCTCTCAGGGGTTG 1197
|||||| | || | | || || || || || | ||| |||||||| |||||||||||||
Sbjct 1132 CCGATTGTTGCATGT-GGAAACTTCCTTGA-TGGCTTACAATGCGTACTCTCAGGGGTTG 1189
Query 1198 CTAGAGGATGTGGATGGCAGAAGATAGGAGCAATCAT-T-AACCTTGGTTCATATTATCT 1255
|||||||||||||||||||||| || |||||| | | | || ||||| |||||||||||
Sbjct 1190 CTAGAGGATGTGGATGGCAGAAAATTGGAGCA-TG-TGTGAATCTTGGATCATATTATCT 1247
Query 1256 TGTTGGAGTTCC-TTCAGGCTTGTTACTTGCTTTCCACTTTC-ACGTTGGTGGTCGGGGG 1313
|||||||||||| || ||| |||||||||| |||||| |||| || ||||||||||||||
Sbjct 1248 TGTTGGAGTTCCATT-AGGATTGTTACTTGGTTTCCA-TTTCCACATTGGTGGTCGGGGG 1305
Query 1314 CTTTGGCTTGGAATCATATGTGCCCTCGT-TGTTCAAGTTTT-TGGTCTTGCCCTCGTCA 1371
|||||||| |||||| || || | || ||||||||| || || |||| || | ||||
Sbjct 1306 CTTTGGCTGGGAATCGTAACAGCATT-GTCTGTTCAAGTGTTGTG-TCTTTCCTTAGTCA 1363
Query 1372 CCATTTTTACAAATTGGGATGAAGAGGCCAAGAAAGCTACAAATAGA 1418
| || || ||||| |||||| ||||||| ||||||||||| || |||
Sbjct 1364 CTATATTCACAAACTGGGATAAAGAGGCAAAGAAAGCTACGAACAGA 1410
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 74045803875
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5