BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg949847 Length=299 Score E Sequences producing significant alignments: (Bits) Value AT5G49010.1 | Symbols: SLD5 | DNA replication protein-related |... 195 3e-49 > AT5G49010.1 | Symbols: SLD5 | DNA replication protein-related | chr5:19866231-19868365 FORWARD LENGTH=1187 Length=1187 Score = 195 bits (105), Expect = 3e-49 Identities = 117/123 (95%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 73 GAAGAAACAATTGAAGATTATGTGGAAAATGGCATAGACCCTCTCATGGTGTCTCTTTAT 132 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||| Sbjct 402 GAAGAAACAATTGAAGATTATGTGGAAAATGGCATAGATCCTCTGGTGGTGTCTCTATAT 461 Query 133 CAGATGGATTTGGACAGAGCCCAGTTTCTACTCAGATCTTATCTCAGGGTTAGGCTTCTC 192 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct 462 CAGATGGATTTGGACAGAGCCCAGTTTCTACTCAGATCATATCTCAGAGTTAGGCTTCTC 521 Query 193 AAG 195 ||| Sbjct 522 AAG 524 Score = 99.0 bits (53), Expect = 2e-20 Identities = 55/56 (98%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 7 GATTATGAAACATTGATGTCGACATCGGACGTTGAGCTATTGAAGAGGGCGTGGCG 62 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 267 GATTACGAAACATTGATGTCGACATCGGACGTTGAGCTATTGAAGAGGGCGTGGCG 322 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 13823630975 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5