BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg950058 Length=472 Score E Sequences producing significant alignments: (Bits) Value AT5G54210.1 | Symbols: | Haloacid dehalogenase-like hydrolase ... 688 0.0 AT1G20320.1 | Symbols: | Haloacid dehalogenase-like hydrolase ... 285 3e-76 > AT5G54210.1 | Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr5:22008612-22009532 FORWARD LENGTH=921 Length=921 Score = 688 bits (372), Expect = 0.0 Identities = 424/450 (94%), Gaps = 0/450 (0%) Strand=Plus/Plus Query 1 TGTTTTCCATGTATGTTTACACGATGGGAGATCGTGATTACGCAAAGAACGTGTTGAAGC 60 ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| | Sbjct 461 TGTTTTCCATGTATGTTTACACGATGGGAGATCGTGATTACGCAATGAATGTGTTGAACC 520 Query 61 TGATTGATCCGGAGAAAGTATACTTTGGGGATCGAGTGATAACCAGAAACGAGAGTCCTT 120 ||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||| Sbjct 521 TGATTGATCCGGAAAAAGTATACTTTGGAGATCGAGTGATAACTAGAAACGAGAGTCCTT 580 Query 121 ATATAAAGACACTTGATCTTGTTTTGGCAGATGAGTGTGGAGTTGTGATTGTGGATGATA 180 |||| ||||| |||||||||||||| || ||||||||||| ||||||||||||||||||| Sbjct 581 ATATTAAGACGCTTGATCTTGTTTTAGCTGATGAGTGTGGTGTTGTGATTGTGGATGATA 640 Query 181 CTGCTCAAGTTTGGCCTGATCACAAGAGGAACCTGCTAGAGATCACCAAATACAATTATT 240 || |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 641 CTCCTCATGTTTGGCCTGATCACAAGAGGAATTTGCTAGAGATCACCAAATACAATTATT 700 Query 241 TTAGTGACAAGACAAGACGCGATGTGAAGTACTCGAAATCTTATGCAGAGGAGAAGAGAG 300 |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct 701 TTAGTGACAAGACAAGACACGATGTGAAGTACACGAAATCTTATGCAGAGGAGAAGAGAG 760 Query 301 ACGAGGGTCGAAACGATGGATCGTTGGGGAATGTTTTGAAAGTTATCAAGGAAGTTTATG 360 ||||| |||||||||||||||| |||| |||||||||||||||||||||| ||||||||| Sbjct 761 ACGAGAGTCGAAACGATGGATCTTTGGCGAATGTTTTGAAAGTTATCAAGCAAGTTTATG 820 Query 361 AACGATTCTTTAGCGGCGGAGTTGAGAAAGAGTTAGATATTGATTCAAAGGATGTGAGGT 420 || ||||||| || || |||||||||||||| |||||||||||||||||||||||||||| Sbjct 821 AAGGATTCTTCAGTGGAGGAGTTGAGAAAGACTTAGATATTGATTCAAAGGATGTGAGGT 880 Query 421 TGTTGCTTCATGATGCACGTAGACCAAAGT 450 |||||||||||||||||||||||||||||| Sbjct 881 TGTTGCTTCATGATGCACGTAGACCAAAGT 910 > AT1G20320.1 | Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr1:7033657-7034874 REVERSE LENGTH=1218 Length=1218 Score = 285 bits (154), Expect = 3e-76 Identities = 345/433 (80%), Gaps = 30/433 (7%) Strand=Plus/Plus Query 3 TTT-TCCATGTATGTTTACACGAT-GGGAGATCGTGATTACGCAAAGAAC-GTGTTGAAG 59 ||| ||||||||||| |||||||| |||| ||||||| ||||| || | ||| |||| Sbjct 414 TTTCTCCATGTATGTCTACACGATGGGGA-ATCGTGACTACGCTCAG-GCTGTGCTGAA- 470 Query 60 CT-GATTGATCCGGAGAAAGTATACTTTGGGGATCGAGTGATAACCAGAAACGAGAGTCC 118 | |||||||||| |||||||||||||||||||| |||| || |||||| |||||||| Sbjct 471 ATGGATTGATCCGAAGAAAGTATACTTTGGGGATAGAGTCATTACCAGAGACGAGAGTGG 530 Query 119 TTATAT-AAAGACACTTGATCTTGTTTTGGCAGATGAGTGTGGAGTTGTGATTGTGGATG 177 || | | ||||| ||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct 531 TT-TTTCGAAGACGCTTGATCTTGTGTTGGCTGATGAGTGTGGAGTTGTGATTGTGGATG 589 Query 178 ATACT-GCTCAAGTTTGGCCTGATCACAAGAGGAACCTGCTAGAGATCACCAAATACAAT 236 | ||| | ||| |||||||||||||| ||||||| |||||| |||| ||||| |||| | Sbjct 590 ACACTCG-TCATGTTTGGCCTGATCATGAGAGGAATCTGCTACAGATTACCAAGTACAGT 648 Query 237 TATTTTAGTGACAAGACAAGACGCGATGTGAAGTACTCGAAATCTTATGCAGAGGAGAAG 296 || || || || | | | | ||| ||| | || |||||||| |||||||||||| Sbjct 649 TACTTCAGAGATTATA---GTCATGAT---AAGGAGTCAAAATCTTACGCAGAGGAGAAG 702 Query 297 AGAGACGAGGGTCGAAACGATGGATCGTTGGGGAATGTTTTGAAAGTTATCAAGGAAGTT 356 ||||||||| || | ||| | ||||| |||| |||||||||||||||| ||||||| ||| Sbjct 703 AGAGACGAGAGTAGGAACCAGGGATCATTGGCGAATGTTTTGAAAGTTCTCAAGGATGTT 762 Query 357 TATGAACGA-TTCTTT-AGCGGCGGAGTTGAGAAAGAGTTAGATATTGATTCAAAGGATG 414 | || || || ||| || |||||| ||||| || |||||| | ||||||| | Sbjct 763 CACCAA-GAATT-TTTCAGAGGCGGAATTGAGGAA---TTAGAT-T-----CAAAGGACG 811 Query 415 TGAGGTTGTTGCT 427 ||||| ||||||| Sbjct 812 TGAGGCTGTTGCT 824 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 22454663709 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5