BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg950087
Length=786
Score E
Sequences producing significant alignments: (Bits) Value
AT5G54430.1 | Symbols: ATPHOS32, PHOS32 | Adenine nucleotide al... 1186 0.0
AT4G27320.1 | Symbols: ATPHOS34, PHOS34 | Adenine nucleotide al... 640 0.0
> AT5G54430.1 | Symbols: ATPHOS32, PHOS32 | Adenine nucleotide
alpha hydrolases-like superfamily protein | chr5:22097166-22099758
REVERSE LENGTH=1101
Length=1101
Score = 1186 bits (642), Expect = 0.0
Identities = 716/750 (95%), Gaps = 12/750 (2%)
Strand=Plus/Plus
Query 1 AACAACATCTGaaaaaaaTCATGAAT-C--CAGATTCCGATCATCCTCAGCTTCCCAACA 57
|||||||||||||||||||||||||| | |||||||||||||||| |||||||| ||||
Sbjct 46 AACAACATCTGAAAAAAATCATGAATCCAGCAGATTCCGATCATCCACAGCTTCCAAACA 105
Query 58 TCAAGAtccatcaccctccatctccacgtcactctcaccaccaccactcctcttccactc 117
|||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||
Sbjct 106 TCAAGATCCATCACCCTCCATCTCCACGTCACTCTCACCATCACCACTCCTCATCTACTC 165
Query 118 cctcctccgccgcaactccaactccaactGCCGGAGCTCGTCGTAAAATCGGAGTCGCCG 177
|||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
Sbjct 166 CCTCCTCCGCCGCAACTCCAACACCAACCGCCGGAGCTCGTCGTAAAATCGGAGTCGCAG 225
Query 178 TTGATCTCTCTGAAGAAAGCTCCTTCGCCGTTCGTTGGGCTGTAGATCACTACATCCGTC 237
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 226 TTGATCTCTCCGAAGAAAGCTCTTTCGCCGTTCGTTGGGCTGTAGATCACTACATCCGTC 285
Query 238 CCGGAGACGCCGTTGTTCTTCTCCACGTTTCTCCAACTTCCGTCCTCTTCGGTGCCGATT 297
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 286 CCGGAGACGCCGTTGTTCTTCTCCACGTTTCTCCAACCTCCGTCCTCTTCGGTGCCGATT 345
Query 298 GGGGACCTCTCCCTCTGAAAACTCAACCTTCTGTGGAAGATCCAAACGCTCAATCTCAGC 357
|||||||||||||||||||||||||| | | |||||||||||||||||| |||| |
Sbjct 346 GGGGACCTCTCCCTCTGAAAACTCAA----AT-T-GAAGATCCAAACGCTCAACCTCAAC 399
Query 358 CTAGTCAAGAAGATTTTGATGCTTTTACTTCAACAAAAGTTGCGGATCTAGCTAAGCCGT 417
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 400 CTAGTCAAGAGGATTTTGATGCTTTTACTTCAACAAAAGTTGCGGATCTAGCTAAACCGT 459
Query 418 TGAAGGAATTAGGGTTTCCTTATAAGATCCATATAGTGAAAGATCATGATATGAGGGAGA 477
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 460 TGAAGGAGTTAGGGTTTCCTTATAAGATCCATATAGTGAAAGATCATGATATGAGAGAGA 519
Query 478 GATTATGTCTTGAGATTGAGAGGCTTGGTCTTAGTGCTGTGATTATGGGAAGTAGAGGTT 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 520 GATTATGTCTTGAGATTGAGAGGCTTGGTCTTAGTGCTGTGATTATGGGAAGTAGAGGTT 579
Query 538 TTGGTGCTGAGAAAA---GAGGAAGTGATGGCAAGCTTGGCTCTGTTAGTGATTACTGTG 594
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 580 TTGGTGCTGAGAAAAAAAGAGGAAGTGATGGCAAGCTTGGCTCTGTTAGTGATTACTGTG 639
Query 595 TTCATCACTGTGTTTGTCCCGTTGTTGTGGTTAGATATCCTGATGATCGTGATGGACCTG 654
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 640 TTCATCACTGTGTTTGTCCTGTTGTTGTGGTTAGATATCCTGATGATCGTGATGGACCTG 699
Query 655 TTCCTGTTGTTACTGTCAAGTCTGGTGGAGATGATGATGAAGATGTTGTTGCTGCTTCTG 714
| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 700 TGCCTATTGTTACTGTCAAGTCTGGTGGAGATGATGATGGAGATGTTGTTGCTGCTTCTG 759
Query 715 CTTCTGCTCATCATGAACACATCAAAGATG 744
||||||||||||||||||||||||||||||
Sbjct 760 CTTCTGCTCATCATGAACACATCAAAGATG 789
> AT4G27320.1 | Symbols: ATPHOS34, PHOS34 | Adenine nucleotide
alpha hydrolases-like superfamily protein | chr4:13678464-13680924
REVERSE LENGTH=1300
Length=1300
Score = 640 bits (346), Expect = 0.0
Identities = 558/657 (85%), Gaps = 27/657 (4%)
Strand=Plus/Plus
Query 18 ATCATGAATCCAGATTCCGATCATCCTCAGCTTCCC-AACATCAAGAtccatcaccctcc 76
||||||||||||||||||||| ||||||| | |||| |||||||||||||| || ||| |
Sbjct 205 ATCATGAATCCAGATTCCGATTATCCTCATC-TCCCTAACATCAAGATCCACCATCCTTC 263
Query 77 atctccacgtcactctcaccaccaccactcctcttccactccctcctccgccgcaactcc 136
|||||| ||||||||| ||||||||||| || |||||| ||| |||||||| |||||
Sbjct 264 ATCTCCTCGTCACTCT---CACCACCACTCTTCCTCCACT-CCT--TCCGCCGCTACTCC 317
Query 137 aactccaactGCCGGAGCTCGTCGTAAAATCGGAGTCGCCGTTGATCTCTCTGAAGAAAG 196
|| ||||| ||||| ||||| ||||| ||||||||||||||||| || || ||||||||
Sbjct 318 TACCCCAACCGCCGGTGCTCGCCGTAAGATCGGAGTCGCCGTTGACCTTTCCGAAGAAAG 377
Query 197 CTCCTTCGCCGTTCGTTGGGCTGTAGATCACTACATCCGTCCCGGAGACGCCGTTGTTC- 255
| | ||||| ||||| |||||||| ||||| ||||||||||||||||||||||| | ||
Sbjct 378 CGCTTTCGCTGTTCGCTGGGCTGTCGATCATTACATCCGTCCCGGAGACGCCGTCG-TCA 436
Query 256 TTCTCCACGTTTCTCCAACTTCCGTCCTCTTCGGTGCCGATTGGGGACCTCTCCCTCTGA 315
||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||
Sbjct 437 TTCTCCACGTTTCTCCAACCTCCGTTCTCTTCGGCGCCGATTGGGGACCTCTCCCTCTCC 496
Query 316 AAACTCAACCT--T-C-T--G-TG-GA-AGAT-CCAAACGCTCAATCTCAGCCTAGTCAA 365
|||||| ||| | | | | | | ||| || | ||||| | ||||||||||
Sbjct 497 AAACTCCTCCTCCTCCTTCCGCCGCTACCGATCCCGGA-GCTCAGCCGAAGCCTAGTCAG 555
Query 366 GAAGATTTTGATGCTTTTACTTCAACAAAAGTTGCGGATCTAGCTAAGCCGTTGAAGGAA 425
|||||||| ||||| |||||||| | ||||| ||||||||||| |||||||||||||||
Sbjct 556 GAAGATTTCGATGCGTTTACTTCTTCCAAAGTAGCGGATCTAGCGAAGCCGTTGAAGGAA 615
Query 426 -TTAGGGTTTCCTTATAAGATCCATATAGTGAAAGATCATGATATGAGGGAGA-GATTAT 483
| ||||||||| ||||||||||||||||||||||||| |||||||| |||| | || |
Sbjct 616 GCT-GGGTTTCCTCATAAGATCCATATAGTGAAAGATCACGATATGAGAGAGAGGCTT-T 673
Query 484 GTCTT-GAGATTGAGAGGCTTGGTCTTAGTGCTGTGATTATGGGAAGTAGAGGTTTTGGT 542
| ||| |||| ||| |||||| ||| || || ||||| |||||||| ||||| ||||||
Sbjct 674 G-CTTAGAGACTGAAAGGCTTAATCTAAGCGCCGTGATAATGGGAAGCAGAGGATTTGGT 732
Query 543 GCTGAGAAAAGAGGAAGTGATGGCAAGCTTGGCTCTGTTAGTGATTACTGTGTTCATCAC 602
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 733 GCTGAGAAGAGAGGAAGTGATGGCAAGCTTGGCTCTGTTAGTGATTATTGTGTTCACCAT 792
Query 603 TGTGTTTGTCCCGTTGTTGTGGTTAGATATCCTGATGATCGTGATGGACCTGTTCCT 659
||||||||||| |||||||| |||||||||||||||||||||||||| |||| ||||
Sbjct 793 TGTGTTTGTCCTGTTGTTGTTGTTAGATATCCTGATGATCGTGATGGTCCTGCTCCT 849
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 38228185867
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5