BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg950094
Length=1967
Score E
Sequences producing significant alignments: (Bits) Value
AT5G54510.1 | Symbols: GH3.6, DFL1 | Auxin-responsive GH3 famil... 3291 0.0
AT4G27260.1 | Symbols: GH3.5, WES1 | Auxin-responsive GH3 famil... 1836 0.0
> AT5G54510.1 | Symbols: GH3.6, DFL1 | Auxin-responsive GH3 family
protein | chr5:22131093-22133678 REVERSE LENGTH=2181
Length=2181
Score = 3291 bits (1782), Expect = 0.0
Identities = 1905/1965 (97%), Gaps = 6/1965 (0%)
Strand=Plus/Plus
Query 6 TTAAACAC-AAACCTAAACGATGCCTGAGGCACCAAAGATCGTAGCTTTGGAGGTTTCTG 64
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 95 TTAAACACAAAACCTAAACGATGCCTGAGGCACCAAAGATCGCAGCTTTGGAGGTTTCTG 154
Query 65 ATGAGAGCCTCGCGGAGAAGAACAAGAACAAACTCCAATTCATCGAAGACGTGACCACGA 124
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 155 ATGAGAGCCTCGCTGAGAAGAACAAGAACAAACTCCAATTCATCGAAGACGTGACCACGA 214
Query 125 ACGCAGATGATGTTCAGAGACGAGTTCTTGAGGAGATCCTTTCACGTAATGCTGACGTGG 184
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 215 ACGCAGATGATGTTCAGAGACGAGTTCTTGAAGAGATCCTTTCACGTAATGCTGATGTGG 274
Query 185 AGTATCTCAAACGACACGGGCTCGATGGACGAACCGACCGTGAGACTTTCAAACATGTCA 244
||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||| |||
Sbjct 275 AGTATCTTAAACGACACGGGCTCGAAGGACGAACCGATCGTGAGACTTTCAAACATATCA 334
Query 245 TGCCTGTCGTAACTTACGAAGATATTCAACCTGAGATCAACAGAATCGCTAATGGTGATA 304
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 335 TGCCTGTCGTAACTTACGAAGATATTCAACCTGAGATCAACAGAATCGCCAATGGTGATA 394
Query 305 AATCCCAAATCCTCTGTTCTAACCCCATCTCTGAGTTCCTCACAAGTTCTGGGACTTCTG 364
| || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 395 AGTCTCAAGTCCTCTGTTCTAACCCCATCTCTGAGTTCCTCACAAGTTCTGGGACTTCTG 454
Query 365 GTGGAGAGAGGAAACTGATGCCAACAATAGAAGAGGAACTAGACAGAAGATCACTTCTCT 424
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 455 GTGGAGAGAGGAAACTGATGCCAACAATCGAAGAGGAACTAGACAGAAGATCACTTCTCT 514
Query 425 ACAGTCTCTTGATGCCTGTGATGAACCAGTTTGTTCCTGGTCTTGACAAAGGCAAAGGAA 484
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 515 ACAGTCTCTTGATGCCTGTGATGGACCAGTTTGTTCCTGGTCTTGACAAAGGCAAAGGGA 574
Query 485 TGTATTTTCTGTTTATCAAATCCGAATCCAAGACACCAGGTGGTCTCCCTGCTCGTCCTG 544
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 575 TGTATTTTCTGTTTATCAAATCAGAATCCAAGACACCAGGTGGTCTCCCTGCTCGTCCTG 634
Query 545 TTTTAACCAGTTACTACAAATCCTCTCACTTCAAAAACAGACCTTTTGATCCTTACAATA 604
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 635 TTTTAACCAGTTACTACAAATCCTCTCACTTCAAAAACAGACCTTATGATCCTTACACCA 694
Query 605 ACTACACAAGTCCCAACCAAACCATCCTTTGTTCTGACTCTTACCAGAGCATGTACTCTC 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 695 ACTACACAAGTCCCAACCAAACCATCCTTTGTTCTGACTCTTACCAGAGCATGTACTCTC 754
Query 665 AAATGCTTTGTGGTTTATGCCAACACAAAGAGGTTCTTCGTGTTGGTGCTGTTTTTGCCT 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 755 AAATGCTTTGTGGTTTATGCCAACACAAAGAGGTTCTTCGTGTTGGTGCTGTTTTTGCCT 814
Query 725 CTGGTTTCATTAGAGCCATCAAATTTCTTGAGAAACATTGGTCTGAGCTAGCCCGTGACA 784
|||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||
Sbjct 815 CTGGTTTCATTAGAGCCATCAAGTTTCTTGAGAAACATTGGCCTGAGCTAGCTCGTGACA 874
Query 785 TTAGAACCGGTACCCTCAGTTCCGAGATAACCGAT-CTTTCAGTTCGTGAGGCAGTCGGG 843
||||||||||||| ||||||||||||||||||||| ||| | ||||||||||| ||||||
Sbjct 875 TTAGAACCGGTACTCTCAGTTCCGAGATAACCGATTCTT-CGGTTCGTGAGGCGGTCGGG 933
Query 844 GAGATTCTTAAACCGGATCCTAAGCTTGCTGATTTCGTCGAATCGGAATGCAGGAAGACC 903
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 934 GAGATTCTTAAACCGGATCCTAAGCTTGCTGATTTCGTCGAATCTGAATGCAGGAAGACT 993
Query 904 TCTTGGCAAGGGATCATCACTAGGCTTTGGCCAAACACCAAGTATGTGGATGTGATTGTG 963
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 994 TCTTGGCAAGGGATCATCACTAGGCTTTGGCCAAACACTAAGTATGTGGATGTGATTGTG 1053
Query 964 ACCGGAACAATGTCACAGTATATTCCAACTCTGGATTATTATAGCAATGGTTTGCCTCTT 1023
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1054 ACTGGAACAATGTCACAGTATATTCCAACTCTGGATTATTACAGCAATGGTTTGCCTCTT 1113
Query 1024 GTCTGCACAATGTATGCTTCTTCGGAGTGTTACTTTGGTGTGAATCTCAGGCCTCTCTGC 1083
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 1114 GTCTGCACAATGTATGCTTCTTCGGAGTGTTACTTCGGTGTGAATCTCAGGCCACTCTGC 1173
Query 1084 AAACCAAGTGAAGTCTCTTACACTCTCATACCGAACATGGCGTATTTCGAGTTCTTGCCT 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1174 AAACCAAGTGAAGTCTCTTACACTCTCATACCGAACATGGCGTATTTCGAGTTCTTGCCT 1233
Query 1144 GTTCATAGGAACAGTGGAGTCACTAGCTCAATCAGTCTTCCGAAAGCACTCACTGAGAAA 1203
|||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||
Sbjct 1234 GTTCATAGGAACAGTGGAGTTACTAGCTCTATCAGTCTTCCAAAAGCACTCACTGAGAAA 1293
Query 1204 GAACAACAAGAGCTTGTTGATCTCGTTGATGTCAAGCTTGGTCAGGAGTACGAGCTTGTT 1263
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1294 GAACAACAAGAGCTTGTTGATCTCGTCGATGTCAAGCTTGGTCAGGAGTACGAGCTTGTT 1353
Query 1264 GTCACCACCTATGCTGGACTTTACAGGTACAGAGTGGGTGATGTCCTAAGCGTGGCTGGT 1323
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1354 GTCACCACCTATGCTGGGCTTTACAGGTACAGAGTGGGTGATGTCCTAAGCGTGGCTGGT 1413
Query 1324 TTCAAGAACAATGCGCCTCAGTTCAGCTTCATATGCCGCAAGAACGTTGCTCT-AAGCAT 1382
||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||
Sbjct 1414 TTCAAGAACAATGCGCCTCAGTTCAGCTTCATATGCCGCAAGAACGTGG-TCTTAAGCAT 1472
Query 1383 TGACTCAGACAAAACCGATGAGGTTGAGCTTCAAAACGCAGTTAAAAACGCGGTAACACA 1442
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1473 TGACTCGGACAAAACCGATGAGGTTGAGCTTCAAAACGCAGTTAAAAACGCGGTAACACA 1532
Query 1443 CCTTGTTCCGTTCGATGCCTCACTCTCCGAGTACACTAGCTATGCGGACACATCATCTAT 1502
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1533 CCTTGTTCCGTTTGATGCTTCACTCTCCGAGTACACTAGCTATGCGGACACATCATCTAT 1592
Query 1503 CCCAGGCCACTATGTCTTGTTCTGGGAGCTCTGCTTGAATGGTAACACGCCAATTCCTCC 1562
||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 1593 CCCGGGCCACTATGTCTTATTCTGGGAGCTCTGCTTGAACGGTAACACGCCAATTCCTCC 1652
Query 1563 CTCGGTCTTCGAGGATTGCTGTTTAACCATAGAAGAATCACTTAACAGTGTGTATAGACA 1622
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1653 CTCGGTCTTCGAGGATTGCTGTTTAACCATAGAGGAATCACTTAACAGTGTGTATAGACA 1712
Query 1623 AGGAAGGGTCAGTGACAAGTCCATTGGACCATTGGAGATCAAGATGGTCGAGTCAGGGAC 1682
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1713 AGGAAGGGTCAGTGATAAGTCCATTGGACCATTGGAGATCAAGATGGTCGAGTCAGGGAC 1772
Query 1683 TTTCGATAAGCTCATGGATTATGCGATAAGCTTGGGGGCATCGATCAATCAGTACAAGAC 1742
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1773 TTTCGATAAGCTCATGGATTATGCGATAAGCTTGGGTGCATCGATCAATCAGTACAAGAC 1832
Query 1743 ACCAAGGTGTGTGAAGTTTGCTCCGATCATTGAGCTTTTGAACTCTAGGGTTGTTGATAG 1802
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1833 ACCAAGGTGTGTGAAGTTTGCTCCGATCATTGAGCTTTTAAACTCTAGGGTTGTTGATAG 1892
Query 1803 TTACTTCAGCCCCAAGTGTCCTAAATGGGCCCCTGGTCACAAGCAATGGGGGAGTAACTA 1862
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1893 TTACTTCAGCCCCAAGTGTCCTAAATGGTCCCCTGGTCACAAGCAATGGGGGAGTAACTA 1952
Query 1863 AAGAGGAAACTTTGAGGAAGAAGAGAGACTCTCTATGAAGTAGAAGGTTCTGTTTTTGTA 1922
|||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct 1953 AAGAGGAAACTTTGGGGAAGAAGAAAGACTCTCTATGAAGTAGAAGGTTCTGTTTT-GTA 2011
Query 1923 ATCAAATGAATATCGGGAAAAGTGATTAATCATTATGTCTGTTTG 1967
||||||||||||||| |||||||||| ||| ||||||||||||||
Sbjct 2012 ATCAAATGAATATCGAGAAAAGTGATAAATTATTATGTCTGTTTG 2056
> AT4G27260.1 | Symbols: GH3.5, WES1 | Auxin-responsive GH3 family
protein | chr4:13653609-13656204 FORWARD LENGTH=2246
Length=2246
Score = 1836 bits (994), Expect = 0.0
Identities = 1616/1915 (84%), Gaps = 47/1915 (2%)
Strand=Plus/Plus
Query 19 TAAACGATGCCTGAGGCACCAAAGATCGTAGCTTTGGAGG-TTTCTGATGAGAGC-CTCG 76
||||| ||||||||||||||||||| | | |||| |||| |||| ||| || | || |
Sbjct 90 TAAACCATGCCTGAGGCACCAAAGAAAGAATCTTTAGAGGTTTTC-GATCTGA-CGCTTG 147
Query 77 -CGGAGAAGAACAAG-AACAAACTCCAATTCATCGAAG-ACGTGACCACGAACGCAGATG 133
| | || |||||| || || || || || ||||||| || | ||| | ||||| ||
Sbjct 148 AC-CAAAAAAACAAGCAA-AAGCTTCAGTTGATCGAAGAAC-TCACCTCTAACGCCGACC 204
Query 134 ATGTTCAGAGACGAGTTCTT-GAGGAGATCCTT-TCACGTAATGCTGACGTGGAGTATCT 191
| || || |||| || |||| |||||||| ||| | || ||||||||||||||||||||
Sbjct 205 AAGTCCAAAGACAAG-TCTTGGAGGAGAT-CTTGACCCGCAATGCTGACGTGGAGTATCT 262
Query 192 CAAACGACACGGGCTCGATGGACGAACCGACCGTGAGACTTTCAAACATGTCATGCCTGT 251
|| ||||||| ||| | || || || |||||||||||||||||| | ||||||| ||
Sbjct 263 CAGGCGACACGACCTCAACGGTCGCACTGACCGTGAGACTTTCAAAAACATCATGCCCGT 322
Query 252 CGTAACTTACGAAGATATTCAACCTGAGATCAACAGAATCGCTAATGGTGATAAATC-CC 310
| || |||||||||||| | |||||||||||||| |||||||||||||||||||| ||
Sbjct 323 TATCACCTACGAAGATATTGAGCCTGAGATCAACAGGATCGCTAATGGTGATAAATCACC 382
Query 311 AAATCCTCTGTTCTAACCCCATCTCTGAGTTCCTCACAAGTTCTGGGACTTCTGGTGGAG 370
||||||| ||| || ||||||||||||||||||||||| |||||||| |||||||| |
Sbjct 383 -TATCCTCTCTTCCAAACCCATCTCTGAGTTCCTCACAAGCTCTGGGACATCTGGTGGGG 441
Query 371 AGAGGAAACTGATGCCAACAATAGAAGAGGAACTAGACAGAAGATCACTTCTCTACAGTC 430
||||||| || ||||||||||| |||||||| |||||||| |||||||| ||||||||||
Sbjct 442 AGAGGAAGCTAATGCCAACAATCGAAGAGGAGCTAGACAGGAGATCACTCCTCTACAGTC 501
Query 431 TCTTGATGCCTGTGATGAACCAGTTTGTTCCTGGTCTTGACAAA-GGCAAAGGAATGTAT 489
|||||||||||||||||| |||||| ||||||||||| || ||| ||||||||||||||
Sbjct 502 TCTTGATGCCTGTGATGAGCCAGTTCGTTCCTGGTCTCGA-AAACGGCAAAGGAATGTA- 559
Query 490 TTTC-TGTTTATCAAATCCGAATCCAAGACACCAGGTGGTCTCCCTGCTCGTCCTGTTTT 548
|||| |||| ||||| |||||||||||||| ||||| || ||||||||||||||||| ||
Sbjct 560 TTTCTTGTTCATCAAGTCCGAATCCAAGACTCCAGGAGGCCTCCCTGCTCGTCCTGTCTT 619
Query 549 AACCAGTTACTACAAATCCTCTCACTTCAAA-AACAGACCTTTTGATCCTTACAATAACT 607
|||||||||||||||||| || || |||||| || ||||| | ||||||||||| ||||
Sbjct 620 AACCAGTTACTACAAATCTTCCCATTTCAAAGAA-AGACCCTATGATCCTTACACCAACT 678
Query 608 ACACAAGTCCC-AACCAAACCATCCTTTGTTCTGACTCTTACCAGAGCATGTACTCTCAA 666
||||||| ||| ||| | ||||||||||| |||||||||||||||||||||||||||||
Sbjct 679 ACACAAG-CCCTAACGAGACCATCCTTTGCTCTGACTCTTACCAGAGCATGTACTCTCAG 737
Query 667 ATGCTTTGTGGTTTATGCCAACACAAAGAGGTTCTTCGTGTTGGTGCTGTTTTTGCCTCT 726
||||||||||| ||||| |||||| | ||||||||| | || || ||||| || ||||||
Sbjct 738 ATGCTTTGTGGCTTATGTCAACACCAGGAGGTTCTTAGAGTCGGCGCTGTCTTCGCCTCT 797
Query 727 GGTTTCATTAGAGCCATCAAATTTCTTGAGAAACATTGG-TCTGAGCTAGCCCGTGACAT 785
|| ||||| ||||||||||| |||||||||||||| ||| || ||| | | |||||||||
Sbjct 798 GGATTCATCAGAGCCATCAAGTTTCTTGAGAAACACTGGATC-GAGTTGGTCCGTGACAT 856
Query 786 TAGAACCGGTACCCTCAGTTCCGAGATAACCGATCTTTCAGTTCGTGAGGCAGTCGGGGA 845
|||||||| || || |||||| ||| ||||||| |||||| |||||||| |||| |
Sbjct 857 CAGAACCGGGACTCTAAGTTCCCTGATCACCGATCCTTCAGTGCGTGAGGCGGTCGCCAA 916
Query 846 GATTCTTAAACCGGA-TCCTAAGCTTGCTGATTTCGTCGAATCGGAATGCAGGAAGACCT 904
||| |||||||| || || ||||| ||||||||||| |||| || |||| |||| | |
Sbjct 917 GATCCTTAAACC-GAGCCCAAAGCTAGCTGATTTCGTGGAATTTGAGTGCAAGAAGTCGT 975
Query 905 CTTGGCAAGGGATCATCACTAGGCTTTGGCCAAACACCAAGTATGTGGATGTGATTGTGA 964
| ||||||||||| || |||||||| ||||| ||||| ||||||||||||||||||||||
Sbjct 976 CCTGGCAAGGGATTATTACTAGGCTGTGGCCTAACACAAAGTATGTGGATGTGATTGTGA 1035
Query 965 CCGGAACAATGTCACAGTATATTCCAACTCTGGATTATTATAGCAATGGTTTGCCTCTTG 1024
|||| |||||||| || || ||||||||| |||| || || || ||||| ||||||||||
Sbjct 1036 CCGGGACAATGTCTCAATACATTCCAACTTTGGACTACTACAGTAATGGCTTGCCTCTTG 1095
Query 1025 TCTGCACAATGTATGCTTCTTCGGAGTGTTACTTTGGTGTGAATCTCAGGCCTCTCTGCA 1084
||||||||||||||||||| || ||||||||||||||||||||||| ||||| |||||||
Sbjct 1096 TCTGCACAATGTATGCTTCCTCTGAGTGTTACTTTGGTGTGAATCTAAGGCCACTCTGCA 1155
Query 1085 AACCAAGTGAAGTCTCTTACACTCTCATACCGA-ACATGGCGTATTTCGAGTTCTTGCCT 1143
||||||| || ||||||||||| |||||||| | |||||| ||||||||||||||||||
Sbjct 1156 AACCAAGCGAGGTCTCTTACACGCTCATACC-ATCCATGGCTTATTTCGAGTTCTTGCCT 1214
Query 1144 GTTCATAGGAACAGTGGAGTCACTAGCTCAATCAGTCTTCCGAAAGCACTCACTGAGAAA 1203
|||||||| |||| || || |||| ||| |||| ||||| ||||||||||||||||||
Sbjct 1215 GTTCATAGAAACAACGGTGTTACTAACTCCATCAACCTTCCTAAAGCACTCACTGAGAAA 1274
Query 1204 GAACAACAAGAGCTTGTTGATCTCGTTGATGTCAAGCTTGGTCAGGAGTACGAGCTTGTT 1263
|| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 1275 GAGCAACAAGAGCTTGTTGATCTAGTTGATGTCAAGCTTGGTCAGGAATACGAGCTTGTT 1334
Query 1264 GTCACCACCTATGCTGGACTTTACAGGTACAGAGTGGGTGATGTCCTAAGCGTGGCTGGT 1323
|||||||| || || || |||| ||| |||||||| |||||| | | || ||| |||||
Sbjct 1335 GTCACCACTTACGCCGGGCTTTGCAGATACAGAGTTGGTGATTTATTGAGAGTGACTGGT 1394
Query 1324 TTCAAGAACAATGCGCCTCAGTTCAGCTTCATATGCCGCAAGAACGTTGCTC-TAAGCAT 1382
||||||||||| |||||||| ||||| |||||||| ||||| || | || || | |||||
Sbjct 1395 TTCAAGAACAAAGCGCCTCAATTCAGTTTCATATGTCGCAAAAATG-TGGTCTTGAGCAT 1453
Query 1383 TGACTCAGACAAAACCGATGAGGTTGAGCTTCAAAACGCAGTTAAAAACGCGGTAACACA 1442
|| || ||||| ||||| |||||||||||||| ||||| || || ||||| || |||||
Sbjct 1454 AGATTCCGACAAGACCGACGAGGTTGAGCTTCAGAACGCGGTGAAGAACGCAGTGACACA 1513
Query 1443 CCTTGTTCCGTTCGATGCCTCACTCTCCGAGTACACTAGCTATGCGGACACATCATCTAT 1502
|||||| || || |||||||||||||| |||||||| |||||||| |||||| || ||
Sbjct 1514 CCTTGTCCCATTTGATGCCTCACTCTCTGAGTACACGAGCTATGCAGACACAAGTTCCAT 1573
Query 1503 CCCAGGCCACTATGTCTTGTTCTGGGAGCTCTGCTTGAATGGTAACACGCCAATTCCTCC 1562
||||||||| |||||| |||| |||||||| || ||| |||| ||||| || || |||||
Sbjct 1574 CCCAGGCCATTATGTCCTGTTTTGGGAGCTATGTTTGGATGGAAACACACCGATCCCTCC 1633
Query 1563 CTCGGTCTTCGAGGATTGCTGTTTAACCATAGAAGAATCACTT-AACAGTGTGTATAGAC 1621
|||||||||||||| ||||| ||| | ||||||| ||| || |||| ||| |||||||
Sbjct 1634 TTCGGTCTTCGAGGACTGCTGCTTAGCTGTAGAAGAGTCA-TTCAACACTGTTTATAGAC 1692
Query 1622 AAGGAAGGGTCAGTGACAAGTCCATTGGACC-ATTGGAGATCAAGATGGTCGAGTCAGGG 1680
|||||||||| |||||||||||||| || || || ||||||||||| || ||| |||||
Sbjct 1693 AAGGAAGGGTTAGTGACAAGTCCATAGGCCCGCTT-GAGATCAAGATTGTTGAGCCAGGG 1751
Query 1681 ACTTTCGATAAGCTCATGGATTATGCGATAAGCTTGGGGGCATCGATCAATCAGTACAAG 1740
|| |||||||||||||||||||| || || |||||||| |||||||| |||||||| |||
Sbjct 1752 ACATTCGATAAGCTCATGGATTACGCAATCAGCTTGGGAGCATCGATTAATCAGTATAAG 1811
Query 1741 ACACCAAGGTGTGTGAAGTTTGCTCCGATCATTGAGCTTTTGAACTCTAGGGTTGTTGAT 1800
|| || || || |||||||||||||| || || ||||| |||||||| ||||||||||||
Sbjct 1812 ACGCCGAGATGCGTGAAGTTTGCTCCAATTATCGAGCTATTGAACTCAAGGGTTGTTGAT 1871
Query 1801 AGTTACTTCAGCCCCAAGTGTCCTAAATGGGCCCCTGGTCACAAGCAATGGGGGAGTAAC 1860
||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||
Sbjct 1872 AGTTACTTCAGCCCCAAGTGTCCTAAATGGGTTCCTGGTCACAAACAGTGGGGGAGTAAC 1931
Query 1861 TAAAGA-GGAAACTTTGAGGAA-GAAGA-GAGACTCTCTATGAAG-TAGAAGGTT 1911
||| || |||| | || | || | || |||||||||| ||| | |||||||||
Sbjct 1932 TAA-GATGGAA--TGTG-G-AACGT-GAAGAGACTCTCTTTGA-GCTAGAAGGTT 1979
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 97439257845
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5