BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg950161

Length=317
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G07706.1 | Symbols:  | unknown protein; BEST Arabidopsis tha...  73.1    1e-12


> AT2G07706.1 | Symbols:  | unknown protein; BEST Arabidopsis thaliana 
protein match is: unknown protein (TAIR:ATMG00470.1); 
Has 35333 Blast hits to 34131 proteins in 2444 species: Archae 
- 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants 
- 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI 
BLink). | chr2:3381901-3386102 REVERSE LENGTH=2080
Length=2080

 Score = 73.1 bits (39),  Expect = 1e-12
 Identities = 39/39 (100%), Gaps = 0/39 (0%)
 Strand=Plus/Plus

Query  236   CAGTTGTTCGAGCAAGCAAATGGCTAGCAGGGCCGAGGA  274
             |||||||||||||||||||||||||||||||||||||||
Sbjct  1468  CAGTTGTTCGAGCAAGCAAATGGCTAGCAGGGCCGAGGA  1506



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 14728450457


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5