BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg950331 Length=1561 Score E Sequences producing significant alignments: (Bits) Value AT5G56590.1 | Symbols: | O-Glycosyl hydrolases family 17 prote... 2529 0.0 AT4G29360.1 | Symbols: | O-Glycosyl hydrolases family 17 prote... 97.1 4e-19 > AT5G56590.1 | Symbols: | O-Glycosyl hydrolases family 17 protein | chr5:22907319-22909559 FORWARD LENGTH=1846 Length=1846 Score = 2529 bits (1369), Expect = 0.0 Identities = 1496/1559 (96%), Gaps = 2/1559 (0%) Strand=Plus/Plus Query 1 AAGTGTGTAGTTACACAGCAATGGCGAGAGACTTCAAGCTCATCTTCTCCATTTCTCTTC 60 |||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 183 AAGTGTGTAGTTACTCAGCAATGGCGAGAGACTTCAAGCTTATCTTCTCCATTTCAATTC 242 Query 61 TGCTTCTGCTTCTTGACTGTTGCTACGGTGGCAAGGTCGGAGTTTGTTACGGAAGAAGCG 120 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 243 TGCTTCTGCTTCTAGACTGTTGTTACGGTGGCAAGGTCGGAGTTTGTTACGGAAGAAGCG 302 Query 121 CCGACGATCTTCCAACACCGGCAAAAGTTGTTCAATTGATTCAACAGCACAACATCAAAT 180 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 303 CCGACGATCTTCCAACACCGTCAAAAGTTGTTCAATTGATTCAACAGCACAACATCAAAT 362 Query 181 ACGTTAGAATCTACGATTACAATTCTCAAGTCCTCAAAGCATTTGGAAACACAAGCATTG 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 363 ACGTTAGAATCTACGATTACAATTCTCAAGTCCTCAAAGCATTTGGAAACACAAGCATTG 422 Query 241 AGCTTATGATTGGAGTTCCAAACTCTGATCTTAATGCTTTCTCACAATCCCAATCAAATG 300 |||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct 423 AGCTAATGATTGGAGTTCCAAACTCTGATCTTAACGCTTTCTCTCAATCCCAATCAAATG 482 Query 301 TAGATACGTGGCTTAAGAACAGCGTCTTACCTTACTATCCAACGACCAAGATCACTTACA 360 | || || ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 483 TGGACACCTGGCTTAAGAACAGCGTCTTACCATACTATCCAACGACCAAGATCACTTACA 542 Query 361 TTACCGTTGGAGCTGAGTCTACTGATGATCCACACATCAATGCTTCATCTTTTGTTGTTC 420 |||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| | Sbjct 543 TTACCGTTGGAGCTGAATCTACTGATGATCCACACATCAATGCTTCGTCTTTCGTTGTCC 602 Query 421 CCGCGATGCAGAATGTGTTAACCGGTCTGAGGAAAGTCGGTTTGAGTAGAAGAATCAAGG 480 |||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||| Sbjct 603 CCGCGATGCAGAATGTCTTAACCGCTCTGAGAAAAGTCGGTTTGAGTAGAAGAATCAAGG 662 Query 481 TTTCGACGACTCTTTCGCTCGGGATTCTCTCTAGATCTTTCCCTCCTTCTGCTGGAGCAT 540 ||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct 663 TTTCGACTACTCTTTCCCTCGGAATTCTCTCTAGATCTTTCCCTCCTTCTGCTGGAGCAT 722 Query 541 TCAACAGCAGCTATGCTTATTTCTTGAGACCAATGTTAGAGTTCCTTGCAGAGAATAATT 600 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct 723 TCAACAGCAGCTATGCTTATTTCTTGAGACCAATGTTAGAGTTTCTTGCAGAGAATAAGT 782 Query 601 CTCCTTTCATGATCGATCTTTATCCGTATTACGCTTATAGAGACTCTCCAAACAATGTGT 660 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct 783 CTCCTTTCATGATCGATCTTTATCCGTACTACGCTTACAGAGACTCTCCGAACAATGTGT 842 Query 661 CTTTGGATTATGTGTTGTTTGAGTCTTCCTCTGAAGTGATTGACCCGAACACGGGTTTGC 720 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 843 CTTTGGATTATGTGTTGTTTGAGTCTTCCTCTGAAGTGATTGACCCAAACACGGGTTTGC 902 Query 721 TTTACAAGAACATGTTTGATGCTCAAGTTGATGCTCTCTATTATGCTCTCACGGCTTTAA 780 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct 903 TTTACAAGAACATGTTTGATGCTCAAGTTGATGCTCTTTATTACGCTCTCACGGCTTTAA 962 Query 781 ACTTCCGAACAATCAAGATTATGGTTACCGAGACTGGATGGCCAACCAAAGGTTCACCGA 840 ||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 963 ACTTCAGGACAATCAAGATTATGGTTACTGAGACTGGATGGCCAACCAAAGGTTCACCGA 1022 Query 841 AGGAGAAAGCTGCTGCGTCTCCTGACAACGCGGAGACATACAATTCAAACATAATCCATC 900 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct 1023 AGGAGAAAGCTGCTGCGTCTTCTGACAACGCGGAGACATACAATTCAAACATAATCCGTC 1082 Query 901 ATGTGGTTACCAACCAAGGCACACCTGCAAAACCAGGAGAGGCGATGAACGTTTATATAT 960 |||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 1083 ATGTAGTTACCAACCAAGGCACACCTGCAAAGCCAGGAGAGGCAATGAACGTTTATATAT 1142 Query 961 TCTCATTGTTCAACGAGAATCGAAAAGCGGGTTTAGATTCAGAGAGAAACTGGGGATTGT 1020 |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct 1143 TCTCATTGTTCAACGAGAATCGGAAAGCGGGTTTGGATTCAGAGAGAAACTGGGGATTGT 1202 Query 1021 TCTACCCTGACCAGACGAGCGTTTATCAGTTGGATTTCACGGGAAAGAGTAACGGGTTTC 1080 |||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||| Sbjct 1203 TCTACCCTGACCAGACAAGTGTTTATCAGTTGGATTTCACGGGAAAGAGCAACGGGTTTC 1262 Query 1081 ACTCGAATTCGAGTGGTACAAACTCGAGTGGGAGTAGTAATAGCTGGTGCATTGCTTCCT 1140 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 1263 ACTCTAATTCGAGTGGTACAAACTCAAGTGGGAGTAGTAATAGCTGGTGCATTGCTTCTT 1322 Query 1141 CTAAAGCTTCAGAGAGAGATCTGAAAGGTGCTTTGGATTGGGCTTGTGGTCCTGGAAATG 1200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1323 CTAAAGCTTCAGAGAGAGATCTGAAAGGTGCTTTGGATTGGGCTTGTGGTCCTGGAAATG 1382 Query 1201 TTGATTGCACAGCTATTCAGCCAAGCCAGCCTTGTTTCCAACCAGATACTTTGGTTTCTC 1260 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1383 TTGATTGCACAGCTATTCAGCCAAGCCAGCCTTGTTTTCAACCAGATACTTTGGTTTCTC 1442 Query 1261 ATGCTTCTTTCGTGTTCAATAGCTATTTCCAGCAGAATAGAGCAACAGACGTTGCTTGTA 1320 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | Sbjct 1443 ATGCTTCTTTCGTGTTCAATAGCTATTTCCAACAGAACAGAGCAACAGACGTTGCTTGCA 1502 Query 1321 GCTTTGGAGGAGCTGGTGTTAAGGTCAACAAGGACCCTAGTTATGACAAATGCATATACA 1380 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1503 GCTTTGGAGGAGCTGGTGTTAAAGTCAACAAGGACCCTAGTTATGACAAATGCATATACA 1562 Query 1381 TAACTGCAGGAGGGAACAAAACCAAGGCGACGAATGCAACTGCATTGACCTCCTCTGCTT 1440 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1563 TTACTGCAGGAGGGAACAAAACCAAGGCGACGAATGCAACTGCATTGACCTCCTCTGCTT 1622 Query 1441 CAACTAAAAGTGGAAACGAACCACTCCGATGGATTTTGAAACTCTGTCTCATGATCTCGT 1500 ||||| | |||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 1623 CAACTCCACGTGGAAACGAACTACTCCAATGGATTTTGAAACTCTGTCTCATGATCTCGT 1682 Query 1501 TGTTCTTCAGTTTGCACTCTATGAATTCACAGGCACTGTAACCAGAA-TCTGAAAGAAA 1558 |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||| Sbjct 1683 TGTTCTTCAGTTTGCAAACTATGAATTCACAGGCACTGTAACC-GAAATCTGAAAGAAA 1740 > AT4G29360.1 | Symbols: | O-Glycosyl hydrolases family 17 protein | chr4:14451421-14453915 REVERSE LENGTH=1974 Length=1974 Score = 97.1 bits (52), Expect = 4e-19 Identities = 190/253 (75%), Gaps = 24/253 (9%) Strand=Plus/Plus Query 1125 TGGTGCATTGCTTCCTCTA-AAGCTTCAG-AGA-GAGATCTGAAAG-GTGCTTTGGATTG 1180 ||||| |||||||| || | ||||||| | | | | || ||| || ||| ||||| || Sbjct 1399 TGGTGTATTGCTTCTTC-ACAAGCTTCGGTA-ACG-GAACTG-CAGACTGCATTGGACTG 1454 Query 1181 GGCTTGTGGTCCTGGAAATGTTGATTGCACAGCTATTCAGCCA-AGCCAGCCTTG-TTTC 1238 ||||||||||||||||||||||||||| ||||| |||| ||| | ||| ||||| ||| Sbjct 1455 GGCTTGTGGTCCTGGAAATGTTGATTGTTCAGCTGTTCAACCAGA-CCAACCTTGCTTTG 1513 Query 1239 CAACCAGATACT-TTGGTTTCTCATGCTTCTT-TCGTGTTCAATAGCT-ATTTCCAGCAG 1295 ||||||||||| || | || || || |||| | | ||||| | || ||| ||| ||| Sbjct 1514 -AACCAGATACTGTTC-TCTCACACGCATCTTAT-GCATTCAACA-CTTATTACCAACAG 1569 Query 1296 AATAGAGCAA-CAGACGTTGCTTGTAGCTTTGGA-GGAGCTGGTGTT-AAGGTCAACAAG 1352 | |||||| ||| | | | ||| |||||| | ||||| | ||| ||| | | |||| Sbjct 1570 AGCGGAGCAAGCAG-CATAGATTGCAGCTTTA-ATGGAGCCAGCGTTGAAGTTGA-CAAG 1626 Query 1353 GACCCTAGTTATG 1365 || || ||||||| Sbjct 1627 GATCCAAGTTATG 1639 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 77057836575 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5