BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg950506
Length=2305
Score E
Sequences producing significant alignments: (Bits) Value
AT5G58050.1 | Symbols: SVL4 | SHV3-like 4 | chr5:23494249-23497... 3465 0.0
AT5G58170.1 | Symbols: SVL5 | SHV3-like 5 | chr5:23540049-23543... 3097 0.0
> AT5G58050.1 | Symbols: SVL4 | SHV3-like 4 | chr5:23494249-23497581
REVERSE LENGTH=2599
Length=2599
Score = 3465 bits (1876), Expect = 0.0
Identities = 2164/2305 (94%), Gaps = 12/2305 (1%)
Strand=Plus/Plus
Query 6 GATCAATCACA-AGAGATGCTGAGGTTTTTCATTCTTTTCTCCCTTTTCTTACACTCCTG 64
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 73 GATCAATCAGATAGAGATGCTGAGGTTTTTCATTCTTTTCTCCCTTTTCTTACACTCTTC 132
Query 65 TGTTGCGGCACCCAAGACTCCTGCTGCTGCCGCGGCTGTTCCTGCCAAGAAATGGCTTAC 124
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 133 TGTTGCGGCACCCAAGACTCCTGCTGCTGCCGCAGCTGTTCCTGCCAAGAAATGGCTTAC 192
Query 125 CCTTAACGGACAAGAGCCTGCCGTTGTGGCCAGAGGCGGCTTCTCGGGTCTTTTCCCTGA 184
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 193 CCTTAACGGACAAGAGCCTGCCGTTGTGGCCAGAGGGGGCTTCTCGGGTCTTTTCCCTGA 252
Query 185 GTCAAGCGCCCCTGCAAACGACATGGCTGTTAGCACCAGCTCGCCTGGCCTCACAATGTT 244
||||||| | ||||||||||| ||||| || ||||||||||||||||| ||||||||||
Sbjct 253 GTCAAGCATCTCTGCAAACGACTTGGCTATTGGCACCAGCTCGCCTGGCTTCACAATGTT 312
Query 245 GTGCAACCTTCAGATGACTAAGGACGGTGTGGGCCTTTGCTTGTCAGATATCAGACTTGA 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 313 GTGCAACCTTCAGATGACTAAGGACGGTGTGGGCCTTTGCTTGTCAGATATCAGACTTGA 372
Query 305 CAATGCAACCACCATCTCCTCGCTCTTCCCCAAAGCCCAGAAGACCTACAAGGTCAACGG 364
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 373 CAATGCAACCACCATCTCCTCGGTCTTCCCCAAAGCCCAGAAGACCTACAAGGTCAACGG 432
Query 365 TCAGGACCTCAAGGGCTGGTTTGTCCTTGATTACGATGCCGACACCATCTTCTCCAATGT 424
||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||| ||
Sbjct 433 TCAGGACCTCAAGGGCTGGTTTGTCATTGATTACGATGCCGACACCATATTCAACAAAGT 492
Query 425 CTCTCTGGTCCAAAACATCTTCTCTCGGCCCAGCATCTTCGACGGCCAAATGCCGGTTTC 484
| |||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct 493 CACTCTGGTCCAGAACATCTTCTCTCGGCCTAGCATCTTCGACGGCCAAATGTCGGTTTC 552
Query 485 CGCAGTGGAGGACGTCCTCGGAACCAAGCCTCCCAAGTTCTGGTTGAGCGTTCAGTACGA 544
||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 553 TGCAGTGGAGGATGTCCTTGGAACCAAGCCTCCCAAGTTCTGGTTGAGCGTTCAGTACGA 612
Query 545 TGCCTTCTACATGGAACACAAGCTGAGCGCAGCCGAGTACCTGAGAAGCTTGCGATTCCG 604
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 613 TGCCTTCTACATGGAACACAAGCTGAGCCCAGCCGAGTACCTGAGAAGCTTGCGATTCCG 672
Query 605 CGGCATTAATGTCATTTCATCTCCAGAGATAGGTTTCTTGAAGAGCATTGGGATGGACGC 664
||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 673 CGGCATTAATGTCATCTCATCTCCAGAGATTGGTTTCTTGAAGAGCATCGGGATGGACGC 732
Query 665 AGGCAGGGCCAAAACAAAGCTCATATTCGAGTTCAAAGAGCCCGAGGCAATTGAGCCCAC 724
||||||||||| |||||||||||||| ||||||||||| ||||||||| ||||||||||
Sbjct 733 GGGCAGGGCCAAGACAAAGCTCATATTTGAGTTCAAAGACCCCGAGGCAGTTGAGCCCAC 792
Query 725 CACAAACAAGAAGTACAGCGAGCTTCAGCAGAACCTCGCAGCCATCAAGGCCTTTGCTTC 784
||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 793 CACCAACAAGAAGTACAGCGAGATTCAGCAGAACCTCGCAGCCATCAAGGCCTTTGCTTC 852
Query 785 AGGCGTTCTTGTCCCCAAAGACTACATTTGGCCTC-TTGACTCAGCTAAGTACCTTAAGC 843
|||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct 853 AGGCGTTCTTGTGCCCAAAGACTACATTTGGCC-CATTGACTCAGCTAAGTACCTTAAGC 911
Query 844 CTGCCACCACTTTTGTGGCTGATGCCCATAAAGCCGGTCTAGAGGTCTATGCTTCTGGGT 903
| ||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||
Sbjct 912 CCGCCACCACTTTTGTGGCTGATGCTCACAAAGCCGGTCTAGAGGTCTATGCTTCAGGGT 971
Query 904 TTGCCAACGACATGCGCACTAGCTTCAACTACAGCTACGATCCCTCCACTGAGTATCTCC 963
||||||||||| ||||||| ||||| ||||||||||| |||||||| ||||||||||||
Sbjct 972 TTGCCAACGACTTGCGCACCAGCTTTAACTACAGCTATGATCCCTCTGCTGAGTATCTCC 1031
Query 964 AGTTTGTGGACAATGGCGAGTTCTCTGTTGATGGCGTCATCACCGACTTTCCA-CCAACA 1022
||||||||||||||||| |||||||||||||||| ||||||||||| ||||| ||||||
Sbjct 1032 AGTTTGTGGACAATGGCCAGTTCTCTGTTGATGGTGTCATCACCGA-TTTCCCGCCAACA 1090
Query 1023 GCATCACAAGCCATCACTTGCTTTTCTCACCAAAAGGGCAATCTCCCAAAAGCAGGGCAT 1082
||||||||| | ||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 1091 GCATCACAATCAATCACTTGCTTTTCTCACCAAAACGGCAATCTCCCCAAAGCAGGGCAT 1150
Query 1083 GCATTAGTTATAACTCACAATGGAGCAAGCGGGGACTATCCAGGCTGCACTGATCTGGCT 1142
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1151 GCATTGGTTATAACTCACAATGGAGCAAGCGGAGACTATCCAGGCTGCACTGATCTGGCT 1210
Query 1143 TACCAGAAAGCAATCGACGATGGAGCAGACGTGATCGACTGCTCTGTTCAGATGTCTAAA 1202
|||||||||||||||||||||||||||||| | || |||||||||||||||||||| |||
Sbjct 1211 TACCAGAAAGCAATCGACGATGGAGCAGACATAATTGACTGCTCTGTTCAGATGTCCAAA 1270
Query 1203 GATGGAATCGCTTTCTGCCATGATGCTGCAGACCTCACAGCAAGCACCACTGCCATGACT 1262
|| ||||||||||||||||||||||||||||||||| ||||||| ||||| |||| ||||
Sbjct 1271 GACGGAATCGCTTTCTGCCATGATGCTGCAGACCTCTCAGCAAGTACCACCGCCAGGACT 1330
Query 1263 ACTTTCATGTCCCGAGCCACCAGCGTTCCTGAGATCCAGCCTACCAACGGCATTTTCTCT 1322
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 1331 ACTTTCATGTCCCGAGCCACCAGCGTTCCTGAGATCCAGCCTACCAACGGAATCTTCTCT 1390
Query 1323 TTTGATCTTACATGGGCCGAGATACAGTCTGTGAAGCCACAAATCGAGAACCCCTTCACT 1382
||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||
Sbjct 1391 TTTGATCTTACATGGGCCGAGATCCAGTCTGTGAAGCCACAAATAGAAAACCCCTTCACT 1450
Query 1383 TCCACGGGCTTCCTGAGAAATCCAGCAAACAAGAACGCTGGGAAGTTCACGACTCTTGCG 1442
|||||||||||| |||||| || |||||||||||||| |||||||||||||||||||||
Sbjct 1451 GCCACGGGCTTCCAGAGAAACCCCGCAAACAAGAACGCCGGGAAGTTCACGACTCTTGCG 1510
Query 1443 GACTTCCTTGAGCTCAGCAAAGAAAAGGCAGTCACTGGAGTTTTAATCAACATTGAGAAT 1502
||||||||||||||| |||||| |||||||||||| |||||||||||||||||| |||||
Sbjct 1511 GACTTCCTTGAGCTCGGCAAAGCAAAGGCAGTCACCGGAGTTTTAATCAACATTCAGAAT 1570
Query 1503 GCTGCTTATTTAGCCTCGAAGAAAGGCCTAGGAATCGTAGACGCAGTCAAGTCTGCTCTG 1562
||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||
Sbjct 1571 GCTGCTTATTTAGCCTCGAAGAAAGGCTTAGGAGTCGTAGACGTAGTCAAGTCTGCTCTT 1630
Query 1563 ACCAATTCCACACTCGACAAGCAATCAACTCAGAAGGTTTTGATTCAGTCGGATGACAGT 1622
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1631 ACAAATTCCACACTCGACAAGCAATCAACCCAGAAGGTTTTGATTCAGTCGGATGACAGT 1690
Query 1623 TCAGTTCTATCTAGTTTCGAGGCTGTCCCTCCTTACACTAGAGTCTTGAGTATCGACAAG 1682
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1691 TCAGTTCTATCTAGTTTCGAGGCTGTCCCTCCTTACACAAGAGTCTTGAGTATCGACAAG 1750
Query 1683 GAGATCGGAGATGCTCCTAAGCCATCCGTCGAAGAAATCAAGAAGCACGCAGATGCCGTC 1742
||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||| |||
Sbjct 1751 GAGATCGGAGATGCTCCTAAGACATCCATCGAAGAAATCAAGAAGCATGCAGATGCTGTC 1810
Query 1743 AATCTCATGAGAACTTCCCTCGTCACCGTCTCCCAAAGCTTTGCCACAGGAAAAACTAAC 1802
|||||| |||||||||||||| ||||||||||||||||||||||||| || ||||||||
Sbjct 1811 AATCTCTTGAGAACTTCCCTCATCACCGTCTCCCAAAGCTTTGCCACGGGGAAAACTAAT 1870
Query 1803 GTGGTAGAGGAAATGCACAAAGCGAATATCTCTGTTTACGTCTCGGTCCTAAGAAATGAG 1862
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 1871 GTGGTAGAGGAAATGCACAAAGCGAATATCTCTGTATACGTCTCGGTGCTAAGAAATGAG 1930
Query 1863 TACATCTCCATAGCGTTCGACTACTTCTCTGATCCTACGGTAGAGCTTGCAACATTCATT 1922
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1931 TACATCGCCATAGCGTTCGACTACTTCTCTGATCCTACGATAGAGCTTGCAACATTCATT 1990
Query 1923 GCAGGGAGTGGCGTCGATGGAGTAATCACAGAGTTCCCTGCCACCGCAACCAGATACTTA 1982
|||||||| ||||| |||||||| ||||| ||||||||||||||||| ||||||||| ||
Sbjct 1991 GCAGGGAGAGGCGTTGATGGAGTCATCACGGAGTTCCCTGCCACCGCTACCAGATACCTA 2050
Query 1983 AGGAGTCCATGCTCAGATTTAAACAAAGACCAGCCCTATGCCATCTTACCTGCAGAAGCT 2042
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 2051 AGGAGTCCATGTTCAGATTTGAACAAAGACCAGCCCTATGCCATCTTACCTGCAGATGCT 2110
Query 2043 GGCGCTCTACTCTCCGTTGCAGACAAGGAAGCACAACCACCAGCTAGTGCGCCAAACCCA 2102
|| ||||||||| |||| ||||||||||||||||||| |||||||| | | |||||||||
Sbjct 2111 GGAGCTCTACTCACCGTGGCAGACAAGGAAGCACAACTACCAGCTATTCCCCCAAACCCA 2170
Query 2103 CCTCTTGATGCCAAAGACGTGATTGATCCGCCTCTGCCCCCGGTTGCAAACATGGCCTCC 2162
|||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct 2171 CCTCTTGATGCCAAAGACGTGATTGATCCGCCTCTGCCTCCAGTTGCAAAGTTGGCCTCC 2230
Query 2163 TCCAATGGGACTGGAGAAGGTCCGCCACATACTCCTCCTTC-TTCAGGCACCGGTGCCAC 2221
||||| |||| || ||||||||||| ||||||||| | ||||||||||| |||||
Sbjct 2231 ---AATGGAACTGAAGGTGGTCCGCCACAAACTCCTCCT-CGTTCAGGCACCGTTGCCAT 2286
Query 2222 TGCTGCTAATCTCAGCCTTTCCTTGCTGGCAATGATGGCTTTGGGAATCCTATATACAGC 2281
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct 2287 TGCTGCTAATCTCAGCCTTTCCTTGCTGGCAATGATGGCTTTGGGACTCCTTTATACAGC 2346
Query 2282 CTAATA-AGATTGATCACTCCATAT 2305
|||| | ||||||||||| ||||||
Sbjct 2347 CTAA-AGAGATTGATCACACCATAT 2370
> AT5G58170.1 | Symbols: SVL5 | SHV3-like 5 | chr5:23540049-23543345
REVERSE LENGTH=2622
Length=2622
Score = 3097 bits (1677), Expect = 0.0
Identities = 2078/2273 (91%), Gaps = 21/2273 (1%)
Strand=Plus/Plus
Query 6 GATCAATCACA-AGAGATGCTGAGGTTTTTCAT-TCTTTTCTCCCTTTTCT-TACACTCC 62
||||||||| | |||||||||||||||| |||| | ||||||||||||| | ||||||
Sbjct 142 GATCAATCATACAGAGATGCTGAGGTTTATCATAT-TTTTCTCCCTTTT-TATACACTTA 199
Query 63 TGTGTTGCGGCACCCAAGACTCCTGCTGCTGCCGCGGCTGTTCCTGCCAAGAAATGGCTT 122
|||||||| || ||| |||||||||||||||||||||| |||||||| |||||||||||
Sbjct 200 TGTGTTGCAGCCCCCCAGACTCCTGCTGCTGCCGCGGCGGTTCCTGCTAAGAAATGGCTC 259
Query 123 ACCCTTAACGGACAAGAGCCTGCCGTTGTGGCCAGAGGCGGCTTCTCGGGTCTTTTCCCT 182
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 260 ACCCTTAATGGACAAGAGCCTGCCGTTGTGGCCAGAGGGGGCTTCTCGGGTCTTTTCCCT 319
Query 183 GAGTCAAGCGCCCCTGCAAACGACATGGCTGTTAGCACCAGCTCGCCTGGCCTCACAATG 242
|||||||||||| ||||||||||| ||||| || ||||||||||||||||||||||||||
Sbjct 320 GAGTCAAGCGCCTCTGCAAACGACTTGGCTATTGGCACCAGCTCGCCTGGCCTCACAATG 379
Query 243 TTGTGCAACCTTCAGATGACTAAGGACGGTGTGGGCCTTTGCTTGTCAGATATCAGACTT 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 380 TTGTGCAACCTTCAGATGACTAAGGACGGTGTGGGCCTTTGCTTGTCAGATATCATACTT 439
Query 303 GACAATGCAACCACCATCTCCTC-GCTCTTCCCCAAAGCCCAGAAGACCTACAAGGTCAA 361
||||||||||||||||| || || | ||||||| ||||||||||||||||||||||||||
Sbjct 440 GACAATGCAACCACCATATCTTCAG-TCTTCCCTAAAGCCCAGAAGACCTACAAGGTCAA 498
Query 362 CGGTCAGGACCTCAAGGGCTGGTTTGTCCTTGATTACGATGCCGACACCATCTTCTCCAA 421
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct 499 CGGTCAGGACCTCAAGGGATGGTTTGTCCTTGATTACGATGCCGACACCATCTTCAACAA 558
Query 422 TGTCTCTCTGGTCCAAAACATCTTCTCTCGGCCCAGCATCTTCGACGGCCAAATGCCGGT 481
|||| || ||||||| ||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct 559 TGTCACTTTGGTCCAGAACATCTTCTCTCGGCCTAGCATCTTCGACGGCCAAATGTCGGT 618
Query 482 TTCCGCAGTGGAGGACGTCCTCGGAACCAAGCCTCCCAAGTTCTGGTTGAGCGTTCAGTA 541
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 619 TTCCGCAGTGGAGGACGTCCTTGGAACCAAGCCTCCCAAGTTTTGGTTGAGCGTTCAGTA 678
Query 542 CGATGCCTTCTACATGGAACACAAGCTGAGCGCAGCCGAGTACCTGAGAAGCTTGCGATT 601
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 679 CGATGCCTTCTACATGGAACACAAGCTGAGCCCAGCCGAGTACCTGAGAAGCTTGCAATT 738
Query 602 CCGCGGCATTAATGTCATTTCATCTCCAGAGATAGGTTTCTTGAAGAGCATTGGGATGGA 661
|||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||
Sbjct 739 CCGCGGCATTAATGTCATCTCATCTCCAGAGATTGGTTTCTTGAAGAGCATCGGGATGGA 798
Query 662 CGCAGGCAGGGCCAAAACAAAGCTCATATTCGAGTTCAAAGAGCCC-GAGGCAATTGAGC 720
||| ||||||||||| |||||||||||||||||||||||||| ||| |||||| ||||||
Sbjct 799 CGCGGGCAGGGCCAAGACAAAGCTCATATTCGAGTTCAAAGA-CCCAGAGGCAGTTGAGC 857
Query 721 CCACCACAAACAAGAAGTACAGCGAGCTTCAGCAGAACCTCGCAGCCATCAAGGCCTTTG 780
||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 858 CCACCACCAACAAGAAGTACAGTGAGATTCAGCAGAACCTCGCAGCCATCAAGGCCTTTG 917
Query 781 CTTCAGGCGTTCTTGTCCCCAAAGACTACATTTGGCCTC-TTGACTCAGCTAAGTACCTT 839
|||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||
Sbjct 918 CTTCAGGCGTTCTTGTGCCCAAAGACTACATTTGGCC-CATTGACTCAGCTAAGTACCTT 976
Query 840 AAGCCTGCCACCACTTTTGTGGCTGATGCCCATAAAGCCGGTCTAGAGGTCTATGCTTCT 899
||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 977 AAGCCCGCCACCACTTTTGTGGCTGATGCCCACAAAGCCGGTCTAGAGGTCTATGCTTCA 1036
Query 900 GGGTTTGCCAACGACATGCGCACTAGCTTCAACTACAGCTACGATCCCTCCACTGAGTAT 959
||||||||||| ||| ||||||| ||||| ||||||||||| ||||||||| ||||||||
Sbjct 1037 GGGTTTGCCAATGACTTGCGCACCAGCTTTAACTACAGCTATGATCCCTCCGCTGAGTAT 1096
Query 960 CTCCAGTTTGTGGACAATGGCGAGTTCTCTGTTGATGGCGTCATCACCGACTTTCCA-CC 1018
||||||||||||||||||||| |||| ||||||||||||||||| || || ||||| ||
Sbjct 1097 CTCCAGTTTGTGGACAATGGCCAGTTTTCTGTTGATGGCGTCATTACTGA-TTTCCCGCC 1155
Query 1019 AACAGCATCACAAGCCATCACTTGCTTTTCTCACCAAAAGGGCAATCTCCCAAAAGCAGG 1078
||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 1156 AACAGCATCACAATCCATCACTTGCTTTTCTCACCAAAATGGCAATCTCCCCAAAGCAGG 1215
Query 1079 GCATGCATTAGTTATAACTCACAATGGAGCAAGCGGGGACTATCCAGGCTGCACTGATCT 1138
|||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1216 GCATGCGTTGGTTATAACTCACAATGGAGCAAGCGGAGACTATCCAGGCTGCACTGATCT 1275
Query 1139 GGCTTACCAGAAAGCAATCGACGATGGAGCAGACGTGATCGACTGCTCTGTTCAGATGTC 1198
|||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1276 GGCTTACCAGAAAGCAGTCGATGATGGAGCAGACGTGATCGACTGCTCTGTTCAGATGTC 1335
Query 1199 TAAAGATGGAATCGCTTTCTGCCATGATGCTGCAGACCTCACAGCAAGCACCACTGCCAT 1258
|||||| |||||||||||||||||||||||||||||||| |||||||| ||||| |||||
Sbjct 1336 TAAAGACGGAATCGCTTTCTGCCATGATGCTGCAGACCTTACAGCAAGTACCACCGCCAT 1395
Query 1259 GACTACTTTCATGTCCCGAGCCACCAGCGTTCCTGAGATCCAGCCTACCAACGGCATTTT 1318
||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 1396 GACTATTTTCATGTCCCGAGCCACAAGCGTTCCTGAGATCCAGCCTACCAATGGCATTTT 1455
Query 1319 CTCTTTTGATCTTACATGGGCCGAGATACAGTCTGTGAAGCCACAAATCGAGAACCCCTT 1378
|||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||
Sbjct 1456 TTCTTTTGATCTTACATGGGCTGAGATCCAGTCTGTGAAGCCACAAATAGAGAACCCCTT 1515
Query 1379 CACTTCCACGGGCTTCCTGAGAAATCCAGCAAACAAGAACGCTGGGAAGTTCACGACTCT 1438
|||| |||||||||||| |||||||||||||||||| |||||||| ||||||| |||||
Sbjct 1516 CACTGCCACGGGCTTCCAGAGAAATCCAGCAAACAAAAACGCTGGAAAGTTCATTACTCT 1575
Query 1439 TGCGGACTTCCTTGAGCT-CAGCAAAGAAAAGGCAGTCACTGGAGTTTTAATCAACATTG 1497
|||||| |||||||| || |||||||| |||||| ||||| |||||| | |||||||| |
Sbjct 1576 TGCGGATTTCCTTGA-CTTCAGCAAAGCAAAGGCTGTCACCGGAGTTATGATCAACATCG 1634
Query 1498 AGAATGCTGCTTATTTAGCCTCGAAGAAAGGCCTAGGAATCGTAGACGCAGTCAAGTCTG 1557
||||||||||||| ||||||| ||||| ||||||||| ||||||||||||| ||||| |
Sbjct 1635 AGAATGCTGCTTACCTAGCCTCAAAGAAGGGCCTAGGAGTCGTAGACGCAGTTAAGTCGG 1694
Query 1558 CTCTGACCAATTCCACACTCGACAAGCAATCAACTCAGAAGGTTTTGATTCAGTCGGATG 1617
||||| |||| ||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 1695 CTCTGGCCAAGTCCACACTCGACAAGCAATCAACTCAGAAAGTTTTGATTCAGTCAGATG 1754
Query 1618 ACAGTTCAGTTCTATCTAGTTTCGAGGCTGTCCCTCCTTACACTAGAGTCTTGAGTATCG 1677
||||||| || || | ||||| |||||||||||||| ||||| ||||||||||| || |
Sbjct 1755 ACAGTTCGGTCCTGGCCAGTTTTGAGGCTGTCCCTCCGTACACGAGAGTCTTGAGCATTG 1814
Query 1678 ACAAGGAGATCGGAGATGCTCCTAAGCCATCCGTCGAAGAAATCAAGAAGCACGCAGATG 1737
||||||| ||||||| |||||| |||||||| ||||| |||||||||||| ||||||| |
Sbjct 1815 ACAAGGAAATCGGAGGTGCTCCCAAGCCATCAGTCGATGAAATCAAGAAGTACGCAGAAG 1874
Query 1738 CCGTCAATCTCATGAGAACTTCCCTCGTCACCGTCTCCCAAAGCTTTGCCACAGGAAAAA 1797
| ||||||||| ||||||||||||| ||||| ||||||||||| ||| ||||||| || |
Sbjct 1875 CTGTCAATCTCTTGAGAACTTCCCTAGTCACTGTCTCCCAAAGTTTTACCACAGGGAAGA 1934
Query 1798 CTAACGTGGTAGAGGAAATGCACAAAGCGAATATCTCTGTTTACGTCTCGGTCCTAAGAA 1857
||||||| || |||||||||||||||| ||||||||||||||| || || || |||||||
Sbjct 1935 CTAACGTTGTGGAGGAAATGCACAAAGGGAATATCTCTGTTTATGTTTCAGTGCTAAGAA 1994
Query 1858 ATGAGTACATCTCCATAGCGTTCGACTACTTCTCTGATCCTACGGTAGAGCTTGCAACAT 1917
| |||||||||||| |||||||||||||||||||||| ||||| |||||||||| ||||
Sbjct 1995 ACGAGTACATCTCCGTAGCGTTCGACTACTTCTCTGACCCTACAATAGAGCTTGCCACAT 2054
Query 1918 TCATTGCAGGGAGTGGCGTCGATGGAGTAATCACAGAGTTCCCTGCCACCGCAACCAGAT 1977
||||| ||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||
Sbjct 2055 TCATTTCAGGGAGTGGCGTTGATGGAGTCATCACGGAGTTCCCTGCCACCGCTACCAGAT 2114
Query 1978 ACTTAAGGAGTCCATGCTCAGATTTAAACAAAGACCAGCCCTATGCCATCTTACCTGCAG 2037
|||||| |||||||||||||||||| |||||||| ||||||||||| |||||||| ||||
Sbjct 2115 ACTTAAAGAGTCCATGCTCAGATTTGAACAAAGAACAGCCCTATGCAATCTTACCAGCAG 2174
Query 2038 AAGCTGGCGCTCTACTC-TCCGTTGCAGACAAGGAAGCACAACCACCAGCTAGTGCGCCA 2096
|||| || | |||| || || || |||||||||||||||||||||||||||||||| |||
Sbjct 2175 AAGCCGGTGGTCTAGTCGTC-GTGGCAGACAAGGAAGCACAACCACCAGCTAGTGCCCCA 2233
Query 2097 AACCCACCTCTTGATGCCAAAGACGTGATTGATCCGCCTCTGCCCCCGGTTGCAAACATG 2156
||||| |||||||| ||||||||||||||||||||||||||||| || ||||||||| ||
Sbjct 2234 AACCCGCCTCTTGAGGCCAAAGACGTGATTGATCCGCCTCTGCCTCCAGTTGCAAACTTG 2293
Query 2157 GCCT-CCTCCAATGGGACTGGAGAAGGTCCGCCACATACTCCTCCTTCTTCAGGCACCGG 2215
|| | ||||||||| ||||||| || || | ||||| |||||||| ||||||| ||||
Sbjct 2294 GC-TGCCTCCAATGCAACTGGAGGAGCTCAGTCACATCCTCCTCCTGCTTCAGGAACCGT 2352
Query 2216 TGCCA-CTGCTGCTAATCTCAGCCTTTCCTTGCTGGCAATGATGGCTTTGGGA 2267
||||| | ||||| |||||| | |||||||||||||||||| |||| || |||
Sbjct 2353 TGCCAAC-GCTGCAAATCTCGGTCTTTCCTTGCTGGCAATGTTGGCCTTAGGA 2404
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 114407042055
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5