BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg950508

Length=610
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G58070.1 | Symbols: ATTIL, TIL | temperature-induced lipocal...   976    0.0  


> AT5G58070.1 | Symbols: ATTIL, TIL | temperature-induced lipocalin 
| chr5:23500061-23501209 REVERSE LENGTH=1065
Length=1065

 Score =  976 bits (528),  Expect = 0.0
 Identities = 584/611 (96%), Gaps = 3/611 (0%)
 Strand=Plus/Plus

Query  1    agaagaag-aaagaaaagagaagagaaatgacagagaagaaagagaTGCAGGTGGTGAAA  59
            |||||||| |||||||| |||||||||||||||||||||||||||||| | |||||||||
Sbjct  28   AGAAGAAGAAAAGAAAA-AGAAGAGAAATGACAGAGAAGAAAGAGATGGAAGTGGTGAAA  86

Query  60   GGGCTCGACTTGGAGAGATACATGGGTCGATGGTACGAGATTGCTTCTTTCCCCTCAAGG  119
            |||||| || |||||||||||||||| || ||||||||||||||||||||||| ||||||
Sbjct  87   GGGCTCAACGTGGAGAGATACATGGGCCGTTGGTACGAGATTGCTTCTTTCCCATCAAGG  146

Query  120  TTTCAGCCTAAGAACGGCGTCGACACTCGCGCCACCTACACCCTTAACCCCGACGGTACG  179
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct  147  TTTCAGCCAAAGAACGGCGTCGACACTCGCGCCACCTACACCCTTAACCCCGACGGTACC  206

Query  180  GTGCACGTCTTGAACGAAACGTGGAGCAACGGGAAGAGGGGTTTTATCGAAGGCAGCGCC  239
             | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  207  ATACACGTCTTGAACGAAACGTGGAGCAACGGGAAGAGGGGTTTTATCGAAGGCAGCGCC  266

Query  240  TATAAGGCCGATCCTAAAAGCGACGAGGCTAAGCTCAAAGTCAAGTTCTACGTCCCTCCT  299
            |||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||
Sbjct  267  TATAAGGCCGATCCTAAAAGCGACGAAGCCAAGCTCAAAGTCAAGTTCTATGTCCCTCCT  326

Query  300  TTCCTCCCAATCATTCCCGTCACCGGCGACTACTGGGTGCTCTACATCGATCCTGACTAC  359
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct  327  TTCCTCCCAATCATTCCCGTCACCGGAGACTACTGGGTGCTCTACATCGATCCTGACTAC  386

Query  360  CAGCACGCTCTCATCGGCCAGCCTTCCAGGAGTTATCTCTGGATATTGAGCAGGACGGCG  419
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct  387  CAGCACGCTCTCATTGGCCAGCCTTCCAGGAGTTATCTCTGGATATTGAGCAGGACGGCG  446

Query  420  CATATGGAGGAAGAGACGTATAAGCAGCTGGTGGAGAAGGCGGTGGAGGAAGGTTACGAC  479
            || |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct  447  CAAATGGAGGAAGAGACGTATAAGCAGCTGGTGGAGAAGGCAGTGGAGGAAGGTTATGAC  506

Query  480  ATCAGCAAGCTTCACAAGACTCCTCAGAGCGACACACCACCTGAGTCCAACACTGCCCCT  539
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct  507  ATCAGCAAGCTTCACAAGACTCCTCAGAGTGACACACCACCTGAGTCCAACACTGCCCCT  566

Query  540  GAAGACTCCAAGGGCATTTGGTGGTTCAAATCTCTCTTCGGCAAATAGATTACTCAACAC  599
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |  |||
Sbjct  567  GAAGACTCCAAGGGCGTTTGGTGGTTCAAATCTCTCTTCGGCAAATAGATTACACGGCAC  626

Query  600  ACAAAAGACTT  610
            ||||| |||||
Sbjct  627  ACAAA-GACTT  636



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 29386975995


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5