BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg950547 Length=469 Score E Sequences producing significant alignments: (Bits) Value AT5G58390.1 | Symbols: | Peroxidase superfamily protein | chr5... 403 7e-112 AT5G58400.1 | Symbols: | Peroxidase superfamily protein | chr5... 195 4e-49 > AT5G58390.1 | Symbols: | Peroxidase superfamily protein | chr5:23599567-23601325 REVERSE LENGTH=1220 Length=1220 Score = 403 bits (218), Expect = 7e-112 Identities = 321/371 (87%), Gaps = 6/371 (2%) Strand=Plus/Plus Query 20 CATGGTCGCCCTCTCTGGTGCTCACACCTTTGGACGAGCCAAATGTGTTACATTTAGAAA 79 |||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||| Sbjct 624 CATGGTCGCCCTCTCTGGTGCTCACACCATTGGACGAGCCCAATGTGTTACATTCAGAAA 683 Query 80 CCGTATCTACAACGAAAGTAACATCGACACCTCTTTCGCTATCTC-AAGACGGAAGAGTT 138 ||| |||||||||| ||| || ||||||||||||||||| ||||| || ||||| || | Sbjct 684 CCGAATCTACAACGCAAGCAATATCGACACCTCTTTCGCCATCTCTAA-ACGGAGGAACT 742 Query 139 GTCCAGCCGCCAATGGCTCCGGAGACAACAAGGAAGCCAATCTTGACGTCCGCACTCCTG 198 |||| ||| ||| ||||||||||||||||||| |||||||||||||||||||| |||| | Sbjct 743 GTCCTGCCACCAGTGGCTCCGGAGACAACAAGAAAGCCAATCTTGACGTCCGCTCTCCCG 802 Query 199 ATAGGTTCGACCACAACTACTATAAGCAACTTCTCAGCAATAAGGGTTTGCTTACGCCAG 258 |||||||||||||| || ||| ||||||||||| ||||| || |||||||||||| ||| Sbjct 803 ATAGGTTCGACCACGGCTTCTACAAGCAACTTCTGAGCAAAAAAGGTTTGCTTACGTCAG 862 Query 259 ACCAAGTCCTCTTTAATAACGGTCCCACCGACTCGATCGTCGTATCCTACAGCCGGAGTG 318 ||||||||||||||||||| ||||| ||||||||| ||||| || | ||||||| | | Sbjct 863 ACCAAGTCCTCTTTAATAATGGTCCTACCGACTCGCTCGTCATAGCTTACAGCCACAATC 922 Query 319 TCCGTTCCTTCTACCGCGA-TTTCGTAACGGCGATGATAAAAATGGGCA-ACATCAGCCC 376 || | ||||||||||||| ||| | || ||| ||||| || ||||| | |||||||||| Sbjct 923 TCAATGCCTTCTACCGCGACTTT-GCAAGGGCAATGATTAAGATGGG-AGACATCAGCCC 980 Query 377 ACTCACCGGAT 387 |||||||||| Sbjct 981 CCTCACCGGAT 991 > AT5G58400.1 | Symbols: | Peroxidase superfamily protein | chr5:23605202-23607028 REVERSE LENGTH=1194 Length=1194 Score = 195 bits (105), Expect = 4e-49 Identities = 288/375 (77%), Gaps = 18/375 (5%) Strand=Plus/Plus Query 20 CATGGTCGCCCTCTCTGGTGCTCACACCTTTGGACGAGCCAAATGTGTTACATTTAGAAA 79 |||||| || ||||| || ||||||||| |||| | ||||| || || || || || | Sbjct 631 CATGGTGGCGCTCTCCGGGGCTCACACCATTGGGCAAGCCAGGTGCGTCACCTTCAGGAG 690 Query 80 CCGTATCTACAACGAAAGTAACATCGACAC-CTC-TTTCG-C-TATCTCAAGACGGAAGA 135 ||| || || ||| || ||||||||| | || ||| | | |||| | ||||||| || Sbjct 691 CCGGATATATAACTCAACAAACATCGAC-CTTTCATTT-GCCTTATC-C-AGACGGAGGA 746 Query 136 GTTGTCCAGCCGCCAA-TGGCTCCGGAGACAACAAGGAAGCCAATCTTGA-CGTCCGCAC 193 | || || | || ||| ||||||||| || ||||| | |||| ||| || | ||||||| Sbjct 747 GCTGCCCTG-CGGCAACTGGCTCCGGCGATAACAACGCCGCCATTCTCGATC-TCCGCAC 804 Query 194 TCCTGATAGGTTCGACCACAACTACTAT-AAGCAACTTCTCAGCAATAAGGG-TTTGCTT 251 ||||| | ||||||| || ||||| | | ||| ||| ||| | | | ||| || || Sbjct 805 ACCTGAAAAGTTCGACGGCAGCTACT-TCATGCAGCTTGTCAACCACAGGGGACTT-CTC 862 Query 252 ACGCCAGACCAAGTCCTCTTTAA-TAACGGTCCCACCGACTCGATCGTCGTATCCTACAG 310 || |||| || ||| | || || | ||| |||||||||||||||||||||||||||| Sbjct 863 ACATCAGATCAGGTCTTGTTCAACGGA-GGTTCCACCGACTCGATCGTCGTATCCTACAG 921 Query 311 CCGGAGTGTCCGTTCCTTCTACCGCGATTTCGTAACGGCGATGATAAAAATGGGCAACAT 370 ||||||||||| | |||||| | ||||| ||| |||||||||||||||||||| |||| Sbjct 922 CCGGAGTGTCCAAGCATTCTACAGAGATTTTGTAGCGGCGATGATAAAAATGGGCGACAT 981 Query 371 CAGCCCACTCACCGG 385 ||||||||||||||| Sbjct 982 CAGCCCACTCACCGG 996 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 22303961268 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5