BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg950770 Length=710 Score E Sequences producing significant alignments: (Bits) Value AT5G60142.1 | Symbols: | AP2/B3-like transcriptional factor fa... 508 2e-143 > AT5G60142.1 | Symbols: | AP2/B3-like transcriptional factor family protein | chr5:24216180-24217691 REVERSE LENGTH=1141 Length=1141 Score = 508 bits (275), Expect = 2e-143 Identities = 344/377 (91%), Gaps = 5/377 (1%) Strand=Plus/Plus Query 2 GTTAGGGTTTCAAAGAGGTG-A-A-GATGAACAGAGGAAATTCTGGGGGTAATTGTCTTC 58 |||||||||||||||||||| | | |||||||||||||| ||||| || | ||||||||| Sbjct 78 GTTAGGGTTTCAAAGAGGTGAAGATGATGAACAGAGGAATTTCTGTGGATGATTGTCTTC 137 Query 59 CAAAGTTCTTCAAAGTGTACTTACCTGATGAATCCGGAGATGATCTGGAATTACCCATCT 118 ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| Sbjct 138 CAAAGTTCTTCAAAGTGTACTTACCTGATGATTCCGGAGATGATTTGGAATTACCCATCT 197 Query 119 CTTTCAACAGCTTTTTACCAAAGTCGTTGCCTAAAAATGTAATTGTTAGAAGTATTTATG 178 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 198 CTTTCAACAGCTTTTTACCAAAGTCGTTGCCTAAAAATGTAATTGTTAGAAGCATTTATG 257 Query 179 GAAACATTTGGAAAATGGCGCTTAAGAAGTGTTGTGGTCAT-GTTGAGAGATTTACTATG 237 ||||||| |||||| ||||| ||| ||||| ||||||| || || ||||||||| |||| Sbjct 258 GAAACATCTGGAAAGTGGCGTTTAGGAAGTTTTGTGGTGATAGT-GAGAGATTTGTTATG 316 Query 238 GTTAATGGGTGGAAGAAGATTTTAAAGGACGAAAATCTGAAGGGTGGAGAGTTCTTGGAG 297 |||||||||||||||||||| | ||||||||| || |||| |||||||||||||| || Sbjct 317 GTTAATGGGTGGAAGAAGATAGTCAAGGACGAAGATTTGAAAGGTGGAGAGTTCTTAGAA 376 Query 298 TTTGAGTTTGATGGCTCTTGGTGTTTCAACTTCTGTATCTACGGCCGTGCAACGTTTAAA 357 ||||||||||||||||||||||||||||| ||||||||||| || |||||||||| |||| Sbjct 377 TTTGAGTTTGATGGCTCTTGGTGTTTCAATTTCTGTATCTATGGTCGTGCAACGTGTAAA 436 Query 358 AAGCTTAGAAGTTCAGT 374 | ||||||||||||||| Sbjct 437 AGGCTTAGAAGTTCAGT 453 Score = 490 bits (265), Expect = 8e-138 Identities = 302/320 (94%), Gaps = 1/320 (0%) Strand=Plus/Plus Query 371 CAGTACACTATCTGGATAATCACATGAACCCTTTCTTTACAGTGAACCAGCATCGGCAAA 430 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 823 CAG-ACAATATCTGGATAATCACATGAACCCTTTCTTTACAGTGAACCAGCATCGGCAAA 881 Query 431 TAAAATACAATCTGCTGCGCATACCAACTAAGGTCATAACTAAGTCTGGCTTACACTTCC 490 ||||||| ||| |||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct 882 TAAAATATAATATGCTGCGCATACCAACTAAGGTCATAACGAAGTATGGCTTACACTTCC 941 Query 491 CTGAGTTCATCAATCTGATTGATCCACTCGAGAAAATGTTCGGTAAGTTGAAGAGGAAAG 550 |||||||||||||| ||||||||||||||||||||| || ||||| ||||||||||||| Sbjct 942 CTGAGTTCATCAATTTGATTGATCCACTCGAGAAAAACTTTGGTAAATTGAAGAGGAAAG 1001 Query 551 TTGAGGGTCAAACAATCAAGGGATTCCGTAGTATAATCAGAAGGAATAATGTGAAGTTGA 610 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1002 TTAAGGGTCAAACAATCAAGGGATTCCGTAGTATAATCAGAAGGAATAATGTGAAGTTGA 1061 Query 611 CTGATAAAGTGATTTGTGAGTTAGTAAAGGAGATGGATGGTCTGGTTCGCGAAATCAAGG 670 ||| || |||||||||||||||| |||||||||||||||||| ||||| |||||||||| Sbjct 1062 ATGACAAGGTGATTTGTGAGTTAGAAAAGGAGATGGATGGTCTTGTTCGAGAAATCAAGG 1121 Query 671 TCCATGTTATAAGAGGATGA 690 |||||||||||||||||||| Sbjct 1122 TCCATGTTATAAGAGGATGA 1141 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 34410390695 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5