BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg950803
Length=1319
Score E
Sequences producing significant alignments: (Bits) Value
AT5G60548.1 | Symbols: CPuORF62 | conserved peptide upstream op... 2215 0.0
AT5G60550.1 | Symbols: GRIK2, ATSNAK1 | geminivirus rep interac... 2215 0.0
AT3G45242.1 | Symbols: CPuORF61 | conserved peptide upstream op... 1046 0.0
AT3G45240.1 | Symbols: GRIK1, ATSNAK2 | geminivirus rep interac... 1046 0.0
> AT5G60548.1 | Symbols: CPuORF62 | conserved peptide upstream
open reading frame 62 | chr5:24339229-24342590 FORWARD LENGTH=1950
Length=1950
Score = 2215 bits (1199), Expect = 0.0
Identities = 1280/1320 (97%), Gaps = 1/1320 (0%)
Strand=Plus/Plus
Query 1 ttt-tttttGAGAAGTAGATCATGTTTCGTGATAGTTTTTTGTTTGCCCGTACCATGGGT 59
||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct 472 TTTATTTTTGAGAAGGAGATCATGTTTCGTGATAGTTTTTTGTTTGCCCGTACCATCGGT 531
Query 60 TGCTTTGGATGCTTTGGCACTTCTGGTAGTAGAACCCGACAATCGCCTAAGCCCTACGAT 119
||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||
Sbjct 532 TGCTTTGGATGCTTTGGCAGTTCTGGTAGTAGAAACCAACAATCGCCTAAGCCCTACGAT 591
Query 120 GATGATACATATTCCTGTGATAGTGATGTAACTAGCACCGCGAGAGGagaagaagaagaa 179
||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 592 GATGATACACATTCCTGTGATAGTGATGTAACTAGCACTGCAAGAGGAGAAGAAGAAGAA 651
Query 180 gatgaagaagaagtagagcagaagaGCCGCTCTAAACGATCTGAGGAAATTTTGAAATAT 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 652 GATGAAGAAGAAGTAGAGCAGAAGAGCCGCTCTAAACGATCTGAGGAAATTTTGAAATAT 711
Query 240 AGATTAGATAATGGATTAATCTGCAGGCACATTCCAGTGAGAGAAACTAATGAACTTATA 299
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 712 AGATTAGATAATGGATTAATCTGCAGACACATTCCAGTGAGAGAAACTAATGAACTTATA 771
Query 300 CGTGGAGAGGATGAAAATGGTGACAAGACTATCAATGAGTATGTTCGCGTATGTAAAATT 359
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 772 CGTGGAGAGGATGAAAATGGTGACAAGACAATCAATGAGTATGTTCGCGTGTGTAAAATT 831
Query 360 GGAGCTGGTAGCTATGGTAAAGTGGTTTTATATCGAAGCACGTTAGACGGCCAGTATTAT 419
||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 832 GGATCCGGTAGCTATGGTAAAGTGGTTTTATATCGAAGCACTTTAGACGGCCAGTATTAT 891
Query 420 GCTATCAAGGCATTTCACAAGTCACATTTATTAAGGCTAAGGGTTGCACCTTCAGAGACT 479
||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||
Sbjct 892 GCTATCAAGGCATTTCACAAGTCGCATTTATTAAGGCTAAGGGTGGCACCGTCAGAGACT 951
Query 480 GCTATGAGTGATGTTCTTCGAGAGGTTATGATTATGAAAATTTTGGAGCATCCTAACATC 539
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 952 GCTATGAGTGATGTTCTTCGTGAGGTTATGATTATGAAAATTTTGGAGCATCCTAACATC 1011
Query 540 GTGAACCTCATTGAGGTGATAGATGACCCTGAAACTGATCATTTTTACATGGTTCTCGAA 599
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1012 GTTAACCTCATTGAGGTGATAGATGACCCTGAAACTGATCATTTTTACATGGTTCTTGAA 1071
Query 600 TACGTTGATGGGAAATGGGTGTATGACGGTTCTGGACCGCCAGGTGCTCTCGGAGAGAAA 659
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1072 TACGTTGATGGAAAATGGGTGTATGACGGTTCTGGACCGCCGGGTGCTCTCGGAGAGAAA 1131
Query 660 ACTGCTAGAAAGTATTTGCGGGATATAGTTACTGGCCTGATGTATCTTCATGCTCATGAT 719
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 1132 ACTGCTAGAAAGTATTTGCGGGATATTGTTACTGGACTGATGTATCTTCATGCTCATGAT 1191
Query 720 GTAATTCACGGGGACATTAAACCCGACAATTTGCTGGTTACTAGTAGCGGTACAGTGAAG 779
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1192 GTTATTCACGGGGACATTAAACCCGACAATTTGCTGGTTACTAGTAGCGGTACAGTGAAG 1251
Query 780 ATAGGAGATTTCAGTGTCAGCCAAGTATTCAAGGATGATGATGATCAACTGCGTCGATCT 839
|||||||||||||||||||||||||| |||||||||||||| ||||| ||||| ||||||
Sbjct 1252 ATAGGAGATTTCAGTGTCAGCCAAGTTTTCAAGGATGATGACGATCAGCTGCGCCGATCT 1311
Query 840 CCCGGGACTCCAGTCTTCACTGCTCCAGAATGTTGTTTAGTATCAGGTATAACGTATAGT 899
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1312 CCCGGGACTCCTGTCTTCACTGCTCCAGAATGTTGTTTAGTATCAGGTATAACGTATAGT 1371
Query 900 GGCAGAGCTGCGGATACATGGGCAGTGGGAGTTACTTTGTATTGTATGATATTGGGACAA 959
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1372 GGCAGAGCTGCGGATACATGGGCAGTGGGAGTTACATTGTATTGTATGATATTGGGACAA 1431
Query 960 TACCCGTTTCTTGCGGATACTCTTCAGGACACGTACGACAAGATTGTTAACAACCCTCTG 1019
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1432 TACCCGTTTCTTGCGGATACTCTTCAGGACACCTACGACAAGATTGTTAACAACCCTCTG 1491
Query 1020 ATAATCCCGGATGGACTGAATCCTCTTCTTAGAGATTTGATCGAAGGTCTCCTTTGCAAA 1079
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1492 ATAATCCCGGATGGATTGAATCCTCTTCTCAGAGATTTGATCGAAGGTCTCCTTTGCAAA 1551
Query 1080 GATCCGAGCCAGAGAATGACACTGAAGAATGTGTCGGAGCATCCATGGGTCATTGGAGAA 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1552 GATCCGAGCCAGAGAATGACACTGAAGAATGTGTCGGAGCATCCATGGGTCATTGGAGAA 1611
Query 1140 GACGGGCACGTCCCTGAGTATTTTTGTTGGTGCAAACGCAATGCTGCCTCAAAGATTGAA 1199
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1612 GACGGGCATGTCCCGGAGTATTTTTGTTGGTGCAAACGCAATGCTGCCTCAAAGATTGAA 1671
Query 1200 GAAGAAGAAGCTAATGGGATCTCTGAAACCTCAGATCCTAACTaaaaaaaCTCGGATGCT 1259
|||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1672 GAAGGAGAAGCTAATGGGATCTCTGAAACCTCAGATCCTAACTAAAAAAACTTTGATGCT 1731
Query 1260 TTTGATCGTTTTAAGAAATGTACAAGCTTTGAAGAATAGATGCATCTACTTAACCGTACA 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1732 TTTGATCGTTTTAAGAAATGTACAAGCTTTGAAGAATAGATGCATCTACTTAACCGTACA 1791
> AT5G60550.1 | Symbols: GRIK2, ATSNAK1 | geminivirus rep interacting
kinase 2 | chr5:24339229-24342590 FORWARD LENGTH=1950
Length=1950
Score = 2215 bits (1199), Expect = 0.0
Identities = 1280/1320 (97%), Gaps = 1/1320 (0%)
Strand=Plus/Plus
Query 1 ttt-tttttGAGAAGTAGATCATGTTTCGTGATAGTTTTTTGTTTGCCCGTACCATGGGT 59
||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct 472 TTTATTTTTGAGAAGGAGATCATGTTTCGTGATAGTTTTTTGTTTGCCCGTACCATCGGT 531
Query 60 TGCTTTGGATGCTTTGGCACTTCTGGTAGTAGAACCCGACAATCGCCTAAGCCCTACGAT 119
||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||
Sbjct 532 TGCTTTGGATGCTTTGGCAGTTCTGGTAGTAGAAACCAACAATCGCCTAAGCCCTACGAT 591
Query 120 GATGATACATATTCCTGTGATAGTGATGTAACTAGCACCGCGAGAGGagaagaagaagaa 179
||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 592 GATGATACACATTCCTGTGATAGTGATGTAACTAGCACTGCAAGAGGAGAAGAAGAAGAA 651
Query 180 gatgaagaagaagtagagcagaagaGCCGCTCTAAACGATCTGAGGAAATTTTGAAATAT 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 652 GATGAAGAAGAAGTAGAGCAGAAGAGCCGCTCTAAACGATCTGAGGAAATTTTGAAATAT 711
Query 240 AGATTAGATAATGGATTAATCTGCAGGCACATTCCAGTGAGAGAAACTAATGAACTTATA 299
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 712 AGATTAGATAATGGATTAATCTGCAGACACATTCCAGTGAGAGAAACTAATGAACTTATA 771
Query 300 CGTGGAGAGGATGAAAATGGTGACAAGACTATCAATGAGTATGTTCGCGTATGTAAAATT 359
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 772 CGTGGAGAGGATGAAAATGGTGACAAGACAATCAATGAGTATGTTCGCGTGTGTAAAATT 831
Query 360 GGAGCTGGTAGCTATGGTAAAGTGGTTTTATATCGAAGCACGTTAGACGGCCAGTATTAT 419
||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 832 GGATCCGGTAGCTATGGTAAAGTGGTTTTATATCGAAGCACTTTAGACGGCCAGTATTAT 891
Query 420 GCTATCAAGGCATTTCACAAGTCACATTTATTAAGGCTAAGGGTTGCACCTTCAGAGACT 479
||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||
Sbjct 892 GCTATCAAGGCATTTCACAAGTCGCATTTATTAAGGCTAAGGGTGGCACCGTCAGAGACT 951
Query 480 GCTATGAGTGATGTTCTTCGAGAGGTTATGATTATGAAAATTTTGGAGCATCCTAACATC 539
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 952 GCTATGAGTGATGTTCTTCGTGAGGTTATGATTATGAAAATTTTGGAGCATCCTAACATC 1011
Query 540 GTGAACCTCATTGAGGTGATAGATGACCCTGAAACTGATCATTTTTACATGGTTCTCGAA 599
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1012 GTTAACCTCATTGAGGTGATAGATGACCCTGAAACTGATCATTTTTACATGGTTCTTGAA 1071
Query 600 TACGTTGATGGGAAATGGGTGTATGACGGTTCTGGACCGCCAGGTGCTCTCGGAGAGAAA 659
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1072 TACGTTGATGGAAAATGGGTGTATGACGGTTCTGGACCGCCGGGTGCTCTCGGAGAGAAA 1131
Query 660 ACTGCTAGAAAGTATTTGCGGGATATAGTTACTGGCCTGATGTATCTTCATGCTCATGAT 719
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 1132 ACTGCTAGAAAGTATTTGCGGGATATTGTTACTGGACTGATGTATCTTCATGCTCATGAT 1191
Query 720 GTAATTCACGGGGACATTAAACCCGACAATTTGCTGGTTACTAGTAGCGGTACAGTGAAG 779
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1192 GTTATTCACGGGGACATTAAACCCGACAATTTGCTGGTTACTAGTAGCGGTACAGTGAAG 1251
Query 780 ATAGGAGATTTCAGTGTCAGCCAAGTATTCAAGGATGATGATGATCAACTGCGTCGATCT 839
|||||||||||||||||||||||||| |||||||||||||| ||||| ||||| ||||||
Sbjct 1252 ATAGGAGATTTCAGTGTCAGCCAAGTTTTCAAGGATGATGACGATCAGCTGCGCCGATCT 1311
Query 840 CCCGGGACTCCAGTCTTCACTGCTCCAGAATGTTGTTTAGTATCAGGTATAACGTATAGT 899
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1312 CCCGGGACTCCTGTCTTCACTGCTCCAGAATGTTGTTTAGTATCAGGTATAACGTATAGT 1371
Query 900 GGCAGAGCTGCGGATACATGGGCAGTGGGAGTTACTTTGTATTGTATGATATTGGGACAA 959
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1372 GGCAGAGCTGCGGATACATGGGCAGTGGGAGTTACATTGTATTGTATGATATTGGGACAA 1431
Query 960 TACCCGTTTCTTGCGGATACTCTTCAGGACACGTACGACAAGATTGTTAACAACCCTCTG 1019
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1432 TACCCGTTTCTTGCGGATACTCTTCAGGACACCTACGACAAGATTGTTAACAACCCTCTG 1491
Query 1020 ATAATCCCGGATGGACTGAATCCTCTTCTTAGAGATTTGATCGAAGGTCTCCTTTGCAAA 1079
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1492 ATAATCCCGGATGGATTGAATCCTCTTCTCAGAGATTTGATCGAAGGTCTCCTTTGCAAA 1551
Query 1080 GATCCGAGCCAGAGAATGACACTGAAGAATGTGTCGGAGCATCCATGGGTCATTGGAGAA 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1552 GATCCGAGCCAGAGAATGACACTGAAGAATGTGTCGGAGCATCCATGGGTCATTGGAGAA 1611
Query 1140 GACGGGCACGTCCCTGAGTATTTTTGTTGGTGCAAACGCAATGCTGCCTCAAAGATTGAA 1199
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1612 GACGGGCATGTCCCGGAGTATTTTTGTTGGTGCAAACGCAATGCTGCCTCAAAGATTGAA 1671
Query 1200 GAAGAAGAAGCTAATGGGATCTCTGAAACCTCAGATCCTAACTaaaaaaaCTCGGATGCT 1259
|||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1672 GAAGGAGAAGCTAATGGGATCTCTGAAACCTCAGATCCTAACTAAAAAAACTTTGATGCT 1731
Query 1260 TTTGATCGTTTTAAGAAATGTACAAGCTTTGAAGAATAGATGCATCTACTTAACCGTACA 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1732 TTTGATCGTTTTAAGAAATGTACAAGCTTTGAAGAATAGATGCATCTACTTAACCGTACA 1791
> AT3G45242.1 | Symbols: CPuORF61 | conserved peptide upstream
open reading frame 61 | chr3:16570478-16573762 REVERSE LENGTH=1945
Length=1945
Score = 1046 bits (566), Expect = 0.0
Identities = 995/1199 (83%), Gaps = 41/1199 (3%)
Strand=Plus/Plus
Query 5 ttttGAGAAGTAGATCATGTTTCGTGATAGTTTTTTGTTTGCCCGTA-CCATGGGTTGCT 63
||||| | ||||||| |||||| ||||||||||| ||||||| | ||| ||||||
Sbjct 445 TTTTG-G-AGTAGATAATGTTTTGTGATAGTTTTGCATTTGCCC-AAGTGATGAGTTGCT 501
Query 64 TTGGATGCTTTGG-CACTTCTGGTAGTAGAACCCGACAATCGCCTAAGCCCTACGATGAT 122
| || || ||||| | ||| | || ||| | |||| || || || || || ||||||
Sbjct 502 TCGGGTGTTTTGGTGGC-TCT-G-AG-AGATCAAGACATTCACCAAATCCATATGATGAT 557
Query 123 GATACATATTCCTGTGATAGTGATGTAACTAGC-A-CCGCGA-GAG--Ga-gaagaagaa 176
|||||||||||| |||||||| || ||| ||| | ||| || ||| || ||||||| |
Sbjct 558 GATACATATTCCCATGATAGTGGTGAAACCAGCAATCCGGGAGGAGATGATGAAGAAGGA 617
Query 177 gaagatgaagaagaagtagagcag-aagaGCCGCTCTAAACGATCTGAGGAAATTTTGAA 235
||||| ||||| ||||||||| || | || || || ||||||||||| |||||||||||
Sbjct 618 GAAGAGGAAGAGGAAGTAGAGGAGCTA-AGTCGTTCCAAACGATCTGAAGAAATTTTGAA 676
Query 236 ATATAGATTAGATAATGGATTAATCTGCAGGCACATTCCAGT-GAGAGAAACTAATGAAC 294
|| || | || | |||||| || |||||||||| ||||||| || ||||||||| |||
Sbjct 677 ATGTAAACTACAAAATGGACTAGTCTGCAGGCAGTTTCCAGTCAAG-GAAACTAATAAAC 735
Query 295 TTATACGTGGAGAGGATGAAAATGGTGACAAGACTATCAATGAGTATGTTCGCGTA-TGT 353
||| ||| |||||||||||| |||| ||||||| || ||||||| |||||| | | ||
Sbjct 736 TTACACGCGGAGAGGATGAAGATGGAAACAAGACAATAAATGAGTTTGTTCGTG-AGCGT 794
Query 354 AAAATTGGAGCTGGTAGCTATGGTAAAGTGGTTTTATATCGAAGCACGT-TAGACGGCCA 412
||||||||| ||||||| ||||| ||||||||| | ||||||||||| | | || | | |
Sbjct 795 AAAATTGGATCTGGTAGTTATGGGAAAGTGGTTCTCTATCGAAGCAC-TGTCGATGACAA 853
Query 413 GTATTATGCTATCAAGGCATTTCACAAGTCACATTTATTAAGGCTAAGGGTTGCACCTTC 472
| |||||||||| ||||| ||||||||||||||||||| |||||| |||||||||||||
Sbjct 854 GCATTATGCTATTAAGGCTTTTCACAAGTCACATTTATCGAGGCTACGGGTTGCACCTTC 913
Query 473 AGAGACTGCTATGAGTGATGTTCTTCGAGAGGTTATGATTATGAAAATTTTGGAGCATCC 532
||| ||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct 914 AGAAACTGCTATGGGTGATGTTCTTCGTGAGGTTATGATTATGAAAACCCTGGAGCATCC 973
Query 533 TAACATCGTGAACCTCATTGAGGTGATAGATGACCCTGAAACTGATCATTTTTACATGGT 592
||| ||||| || |||||||||||||| ||||||||||| |||| |||||||||||||
Sbjct 974 TAATATCGTTAATCTCATTGAGGTGATTGATGACCCTGAGTTTGATGATTTTTACATGGT 1033
Query 593 TCTCGAATACGTTGATGGGAAATGGGTGTATGACGGTTCTGGACCGCCAGGTGCTCTCGG 652
||||||||| |||||||| ||||||| ||||| | ||||||||| || |||||||||||
Sbjct 1034 TCTCGAATATGTTGATGGAAAATGGGCCTATGATGATTCTGGACCACCGGGTGCTCTCGG 1093
Query 653 AGAGAA-AACTGCTAGAAAGTATTTGCGGGATATAGTTACTGGCCTGATGTATCTTCATG 711
||| || |||||||||||||| ||||| ||| ||||| | ||||| ||||| |||||||
Sbjct 1094 AGA-AATTACTGCTAGAAAGTACTTGCGCGATGTAGTTGCCGGCCTCATGTACCTTCATG 1152
Query 712 CTCATGATGTAATTCACGGGGACATTAAACCCGACAATTTGCTGGTTACTAGTAGCGGTA 771
||||| |||||||||| || ||||| ||||| |||||||| ||||||||||||| ||| |
Sbjct 1153 CTCATAATGTAATTCATGGTGACATCAAACCTGACAATTTACTGGTTACTAGTACCGGGA 1212
Query 772 CAGTGAAGATAGGAGATTTCAGTGTCAGCCAAGTATTCAAGGATGATGATGATCAACTGC 831
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 1213 GAGTGAAAATAGGAGATTTCAGTGTCAGCCAAGTATTCAAAGATGATGATGATCAACTCC 1272
Query 832 GTCGATCTCCCGGGACTCCAGTCTTCACTGCTCCAGAATGTTGTTTAGTATCAGGTATAA 891
|| |||| ||||| ||||| ||||| ||||| |||||||||||||||| | |||||
Sbjct 1273 GTAGATCACCCGGCACTCCTGTCTTTACTGCCCCAGAATGTTGTTTAG-----G-TATAA 1326
Query 892 CGTATAGTGGCAGAGCTGCGGATACATGGGCAGTGGGAGTTACTTTGTATTGTATGATAT 951
| || ||||| ||| |||| ||||| |||||||| ||||||||||||||||||||||| |
Sbjct 1327 CATACAGTGGAAGATCTGCAGATACGTGGGCAGTAGGAGTTACTTTGTATTGTATGATTT 1386
Query 952 TGGGACAATACCCGTTTCTTGCG-GATACTCTTCAGGACACGTACGACAAGATTGTTAAC 1010
| ||||||||||| ||||| | | ||||| ||||| || || || |||||||||||| ||
Sbjct 1387 TAGGACAATACCCATTTCTGG-GTGATACACTTCAAGATACTTATGACAAGATTGTTCAC 1445
Query 1011 AACCC-TCTGATAATCCCGGATGGACTGAATCCTCTTCTTAGAGATTTGATCGAAGGTCT 1069
||||| | ||||||| ||||| ||||| ||||||| ||| || || ||||||||||||||
Sbjct 1446 AACCCGT-TGATAATACCGGAAGGACTCAATCCTCGTCTAAGGGACTTGATCGAAGGTCT 1504
Query 1070 CCTTTGCAAAGATCCGAGCCAGAGAATGACACTGAA-GAATGTGTCGGAGCATCCATGGG 1128
||||||||||||||| | |||||| ||||| |||| | |||| ||||||||||||||
Sbjct 1505 CCTTTGCAAAGATCCAAACCAGAGGATGACGTTGAAAGC-TGTGGCGGAGCATCCATGGA 1563
Query 1129 TCATTGGAGAAGACGGG-C-ACGTCCCTGAGTATTTTTGTTGGTGCAAACGCAATGCTG 1185
||| |||||||||||| | | || || || | |||||||||||||||||| ||||
Sbjct 1564 TCACAGGAGAAGACGGGGCTATTTCG--GAATACTGTTGTTGGTGCAAACGCAAAGCTG 1620
> AT3G45240.1 | Symbols: GRIK1, ATSNAK2 | geminivirus rep interacting
kinase 1 | chr3:16570478-16573740 REVERSE LENGTH=2235
Length=2235
Score = 1046 bits (566), Expect = 0.0
Identities = 995/1199 (83%), Gaps = 41/1199 (3%)
Strand=Plus/Plus
Query 5 ttttGAGAAGTAGATCATGTTTCGTGATAGTTTTTTGTTTGCCCGTA-CCATGGGTTGCT 63
||||| | ||||||| |||||| ||||||||||| ||||||| | ||| ||||||
Sbjct 735 TTTTG-G-AGTAGATAATGTTTTGTGATAGTTTTGCATTTGCCC-AAGTGATGAGTTGCT 791
Query 64 TTGGATGCTTTGG-CACTTCTGGTAGTAGAACCCGACAATCGCCTAAGCCCTACGATGAT 122
| || || ||||| | ||| | || ||| | |||| || || || || || ||||||
Sbjct 792 TCGGGTGTTTTGGTGGC-TCT-G-AG-AGATCAAGACATTCACCAAATCCATATGATGAT 847
Query 123 GATACATATTCCTGTGATAGTGATGTAACTAGC-A-CCGCGA-GAG--Ga-gaagaagaa 176
|||||||||||| |||||||| || ||| ||| | ||| || ||| || ||||||| |
Sbjct 848 GATACATATTCCCATGATAGTGGTGAAACCAGCAATCCGGGAGGAGATGATGAAGAAGGA 907
Query 177 gaagatgaagaagaagtagagcag-aagaGCCGCTCTAAACGATCTGAGGAAATTTTGAA 235
||||| ||||| ||||||||| || | || || || ||||||||||| |||||||||||
Sbjct 908 GAAGAGGAAGAGGAAGTAGAGGAGCTA-AGTCGTTCCAAACGATCTGAAGAAATTTTGAA 966
Query 236 ATATAGATTAGATAATGGATTAATCTGCAGGCACATTCCAGT-GAGAGAAACTAATGAAC 294
|| || | || | |||||| || |||||||||| ||||||| || ||||||||| |||
Sbjct 967 ATGTAAACTACAAAATGGACTAGTCTGCAGGCAGTTTCCAGTCAAG-GAAACTAATAAAC 1025
Query 295 TTATACGTGGAGAGGATGAAAATGGTGACAAGACTATCAATGAGTATGTTCGCGTA-TGT 353
||| ||| |||||||||||| |||| ||||||| || ||||||| |||||| | | ||
Sbjct 1026 TTACACGCGGAGAGGATGAAGATGGAAACAAGACAATAAATGAGTTTGTTCGTG-AGCGT 1084
Query 354 AAAATTGGAGCTGGTAGCTATGGTAAAGTGGTTTTATATCGAAGCACGT-TAGACGGCCA 412
||||||||| ||||||| ||||| ||||||||| | ||||||||||| | | || | | |
Sbjct 1085 AAAATTGGATCTGGTAGTTATGGGAAAGTGGTTCTCTATCGAAGCAC-TGTCGATGACAA 1143
Query 413 GTATTATGCTATCAAGGCATTTCACAAGTCACATTTATTAAGGCTAAGGGTTGCACCTTC 472
| |||||||||| ||||| ||||||||||||||||||| |||||| |||||||||||||
Sbjct 1144 GCATTATGCTATTAAGGCTTTTCACAAGTCACATTTATCGAGGCTACGGGTTGCACCTTC 1203
Query 473 AGAGACTGCTATGAGTGATGTTCTTCGAGAGGTTATGATTATGAAAATTTTGGAGCATCC 532
||| ||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct 1204 AGAAACTGCTATGGGTGATGTTCTTCGTGAGGTTATGATTATGAAAACCCTGGAGCATCC 1263
Query 533 TAACATCGTGAACCTCATTGAGGTGATAGATGACCCTGAAACTGATCATTTTTACATGGT 592
||| ||||| || |||||||||||||| ||||||||||| |||| |||||||||||||
Sbjct 1264 TAATATCGTTAATCTCATTGAGGTGATTGATGACCCTGAGTTTGATGATTTTTACATGGT 1323
Query 593 TCTCGAATACGTTGATGGGAAATGGGTGTATGACGGTTCTGGACCGCCAGGTGCTCTCGG 652
||||||||| |||||||| ||||||| ||||| | ||||||||| || |||||||||||
Sbjct 1324 TCTCGAATATGTTGATGGAAAATGGGCCTATGATGATTCTGGACCACCGGGTGCTCTCGG 1383
Query 653 AGAGAA-AACTGCTAGAAAGTATTTGCGGGATATAGTTACTGGCCTGATGTATCTTCATG 711
||| || |||||||||||||| ||||| ||| ||||| | ||||| ||||| |||||||
Sbjct 1384 AGA-AATTACTGCTAGAAAGTACTTGCGCGATGTAGTTGCCGGCCTCATGTACCTTCATG 1442
Query 712 CTCATGATGTAATTCACGGGGACATTAAACCCGACAATTTGCTGGTTACTAGTAGCGGTA 771
||||| |||||||||| || ||||| ||||| |||||||| ||||||||||||| ||| |
Sbjct 1443 CTCATAATGTAATTCATGGTGACATCAAACCTGACAATTTACTGGTTACTAGTACCGGGA 1502
Query 772 CAGTGAAGATAGGAGATTTCAGTGTCAGCCAAGTATTCAAGGATGATGATGATCAACTGC 831
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 1503 GAGTGAAAATAGGAGATTTCAGTGTCAGCCAAGTATTCAAAGATGATGATGATCAACTCC 1562
Query 832 GTCGATCTCCCGGGACTCCAGTCTTCACTGCTCCAGAATGTTGTTTAGTATCAGGTATAA 891
|| |||| ||||| ||||| ||||| ||||| |||||||||||||||| | |||||
Sbjct 1563 GTAGATCACCCGGCACTCCTGTCTTTACTGCCCCAGAATGTTGTTTAG-----G-TATAA 1616
Query 892 CGTATAGTGGCAGAGCTGCGGATACATGGGCAGTGGGAGTTACTTTGTATTGTATGATAT 951
| || ||||| ||| |||| ||||| |||||||| ||||||||||||||||||||||| |
Sbjct 1617 CATACAGTGGAAGATCTGCAGATACGTGGGCAGTAGGAGTTACTTTGTATTGTATGATTT 1676
Query 952 TGGGACAATACCCGTTTCTTGCG-GATACTCTTCAGGACACGTACGACAAGATTGTTAAC 1010
| ||||||||||| ||||| | | ||||| ||||| || || || |||||||||||| ||
Sbjct 1677 TAGGACAATACCCATTTCTGG-GTGATACACTTCAAGATACTTATGACAAGATTGTTCAC 1735
Query 1011 AACCC-TCTGATAATCCCGGATGGACTGAATCCTCTTCTTAGAGATTTGATCGAAGGTCT 1069
||||| | ||||||| ||||| ||||| ||||||| ||| || || ||||||||||||||
Sbjct 1736 AACCCGT-TGATAATACCGGAAGGACTCAATCCTCGTCTAAGGGACTTGATCGAAGGTCT 1794
Query 1070 CCTTTGCAAAGATCCGAGCCAGAGAATGACACTGAA-GAATGTGTCGGAGCATCCATGGG 1128
||||||||||||||| | |||||| ||||| |||| | |||| ||||||||||||||
Sbjct 1795 CCTTTGCAAAGATCCAAACCAGAGGATGACGTTGAAAGC-TGTGGCGGAGCATCCATGGA 1853
Query 1129 TCATTGGAGAAGACGGG-C-ACGTCCCTGAGTATTTTTGTTGGTGCAAACGCAATGCTG 1185
||| |||||||||||| | | || || || | |||||||||||||||||| ||||
Sbjct 1854 TCACAGGAGAAGACGGGGCTATTTCG--GAATACTGTTGTTGGTGCAAACGCAAAGCTG 1910
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 64909304685
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5