BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg950840 Length=836 Score E Sequences producing significant alignments: (Bits) Value AT5G60880.1 | Symbols: BASL | breaking of asymmetry in the stom... 1293 0.0 > AT5G60880.1 | Symbols: BASL | breaking of asymmetry in the stomatal lineage | chr5:24488289-24489778 REVERSE LENGTH=1128 Length=1128 Score = 1293 bits (700), Expect = 0.0 Identities = 790/832 (95%), Gaps = 12/832 (1%) Strand=Plus/Plus Query 8 aaaCATAACAGCCATGGCTTCACAGTGGACAATACCAAAACTTGTCACTTGGAGAGTCAA 67 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 63 AAACATAACAGCCATGGCTTCACAGTGGACAATACCAAAACTTGTCACTTGGAGAGTCAG 122 Query 68 AGATTGGGCTTCCTGTTTCTTGGCTTGCAAGATTCCTCTAGACGTAGATGAAGATGGAGT 127 |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 123 AGATTGGGCTTCTTGTTTCTTGGCTTGCAAGATTCCTCTAGACGGAGATGAAGATGGAGC 182 Query 128 TAATAACAATGGAAACACTACGAACAACAATAATCTAACGTTCAAGAGGATTAAGAGGAA 187 |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 183 TAATAATAATGGAAACACTACGAACAACAATAATCTAACGTTCAAAAGGATTAAGAGGAA 242 Query 188 GA-TAAAGAGTACTAAGAAGAAGAGATCAGAGAGGAAACTCAGTCTAAGCCCACCGGGTA 246 || |||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct 243 GATTAAA-AGTACTAAGAAGAAGAGATCAGAGAGGAAACTCAGCCTAAGCCCACCAGGTA 301 Query 247 CACGTCATCATCATCTTCATCTAAGAAGCAGTAGCGTTTCTCCGACGACGTCGGCGTCTC 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 302 CACGTCATCATCATCTTCATCTAAGAAGCAGTAGCGTTTCTCCGACGACGTCGGGGTCTC 361 Query 307 AACACCGGCGCTTGAGCTGGCCTCAGCCACCTGTCTCAGAAGAATCTGGTTTCATTGTCT 366 | |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct 362 AGCACCGGCGCTTGAGCTGGCCTCAGCCCCCTGTCTCAGAAGAATCTGGATTCATTGTCT 421 Query 367 TCTGCTTCGATCGCGAAGATGGAGGATTT-GATGTGGTTAAAGAGGGTAAACAAGAGAGG 425 |||||||||||||||||||||| || ||| |||||||||||||||||||||||||||| | Sbjct 422 TCTGCTTCGATCGCGAAGATGGTGG-TTTCGATGTGGTTAAAGAGGGTAAACAAGAGAAG 480 Query 426 AAAGAGACCGAATTGTCGTCGGAAAAGTCACCGAGGACGGTGAATCGTAAGCTTATATAT 485 |||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 481 AAAGAGACGGAATCGTCCTCGGAAAAGTCACCGAGGACGGTGAATCGTAAGCTTATATAT 540 Query 486 GGAGGAGACCAAGGAGTAGGAGAAACAGAAAAGAATAAGTCGCCGGAGAATAAAGGAACA 545 ||||||||||||||||||| |||||| |||||||| |||||||||| |||||| ||| Sbjct 541 ---GGAGACCAAGGAGTAGGAGGAACAGAGAAGAATAACTCGCCGGAGACTAAAGGGACA 597 Query 546 GAACAAGATCAGAACGATAACACTTCATGTCAAGAAACTAAAGATGTCTCTTGTGATGTT 605 |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| Sbjct 598 GAACAAGATCAGAACGATAACACTTCATGTCAAGGAACTAAAGATGTCTCTAGTGATGTT 657 Query 606 ACA-CAAGAAACCgaagaagaagaagaagaCATTGATGCCTCTGATAAATCTAGCGGGTC 664 ||| ||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct 658 ACAGAAAG-AACC--A-AAGAAGAAGAAGACATTGATGCCTCTGATAAATCTAGCGGGTC 713 Query 665 TAGTCACTCAGATGAAGGAAGGGGATCTTTTGCATTTCCCATATTAGGAGTAGAGTGGAT 724 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 714 TAGTCACTCAGATGAAGGAAGGGGATCTTTTGCATTTCCCATATTAGGAGTAGAGTGGAT 773 Query 725 GGGGAGCCCTGTTAAGATGCCTGAATCAGATGACTTGTCTCCCAAGAAACAAAAGCCGGT 784 |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 774 GGGGAGTCCTGCTAAGATGCCTGAATCAGATGACTTGTCTCCCAAGAAACAAAAGCCAGT 833 Query 785 TGCTTTAGGGTTCCAATGCTGTAGATTCTGAAAAAGATAACATTCTACAAGT 836 |||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct 834 TGCTTTAGGGTTCCAATGTTGTAGATTCTGAAAAAGATAACATCCTACAAGT 885 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 40739893217 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5