BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg950958
Length=2752
Score E
Sequences producing significant alignments: (Bits) Value
AT5G61960.1 | Symbols: AML1, ML1 | MEI2-like protein 1 | chr5:2... 4348 0.0
AT5G07290.1 | Symbols: AML4, ML4 | MEI2-like 4 | chr5:2293353-2... 1975 0.0
> AT5G61960.1 | Symbols: AML1, ML1 | MEI2-like protein 1 | chr5:24878521-24884720
REVERSE LENGTH=3886
Length=3886
Score = 4348 bits (2354), Expect = 0.0
Identities = 2615/2738 (96%), Gaps = 30/2738 (1%)
Strand=Plus/Plus
Query 20 GATGCCGTCTGATATTATGGAACAGAGAGGTGTTTCAACACCTTCCCACTTTCATGATGA 79
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 658 GATGCCGTCTGATATAATGGAACAGAGAGGTGTTTCAACACCTTCCCACTTTCATGAAGA 717
Query 80 TATTCATATTACTTCAGAGAGGCAATTTGGGTTTATGAAAACAGACCTGATGCCTGAAAA 139
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 718 TATTCATATTACTTCAGAGAGGCAATTTGGGTTTATGAAAACAGACATGATGCCTGAAAA 777
Query 140 CCAAGGTGGTCGTGATAGACTTTCAAGTATGCCAAAGAGTTCCTGGACATCTGAAAGTTA 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 778 CCAAGGTGGTCGTGATAGACTTTCAAGTATGCCAAAGAGTTCCTGGACATCTGAAAGTTA 837
Query 200 CCAGCTGAAGCCACAATCTAGTTTTTCTGGGTCACACTCCTCTGTTAGCCCTAACTCAAG 259
||||||||||||||||||||||||||||||||| ||| |||||| |||||||||| ||||
Sbjct 838 CCAGCTGAAGCCACAATCTAGTTTTTCTGGGTCGCACCCCTCTGGTAGCCCTAACGCAAG 897
Query 260 AAACACTACAAATGGTAGTCAGTGGGAAAGCAGTTTATTTTCCAGCTCAATGTCTGATTT 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 898 AAACACTACAAATGGTAGTCAGTGGGAAAGCAGTTTATTTTCCAGCTCAATGTCTGATTT 957
Query 320 GTTTAGTAGAAAACTGCGGCTACAAGGAAGTGATATGCTATCCACTATGTCTGCAAACAC 379
||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 958 ATTTAGTAGAAAGCTGCGGCTACAGGGAAGTGATATGCTATCCACTATGTCTGCAAACAC 1017
Query 380 AGTTGTTACCCACCGTGAAGAAGAACCGTCTGAATCTTTAGAAGAGATTGAGGCACAAAC 439
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1018 AGTTGTTACCCACCGTGAAGAAGAACCGTCTGAATCTTTGGAAGAGATTGAGGCACAAAC 1077
Query 440 TATTGGAAATCTTCTCCCAGATGAAGATGATCTTTTTGCGGAAGTGACAGGTGAGGTTGG 499
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1078 TATTGGAAATCTTCTCCCAGATGAAGATGATCTTTTTGCAGAAGTGACAGGTGAGGTTGG 1137
Query 500 GCGTAAATCTCGTGCTAATACTGGAGATGATTTGGATGAGTTTGACCTCTTCAGCAGTGT 559
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 1138 GCGTAAATCTCGTGCTAATACAGGAGATGAGTTGGATGAGTTTGACCTCTTCAGCAGTGT 1197
Query 560 TGGTGGCATGGAACTAGATGGAGATGTTTTTTCTTCTGTGAGTCATAGAAATGGTGAGAG 619
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1198 TGGTGGCATGGAACTAGATGGAGATATTTTTTCTTCTGTGAGTCATAGAAATGGTGAGAG 1257
Query 620 AGGTGGCAATAATTCTGTTGGCGAACTTCATCGTGGGGAAATTCCATCCAGAACACTTTT 679
|||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||
Sbjct 1258 AGGTGGCAATAATTCTGTTGGCGAGCTTAACCGTGGGGAAATTCCATCCAGAACACTTTT 1317
Query 680 GGTCGGAAATATCAGTAGCAATATCGAAGACTATGAGTTGAGGGTTATTTTTGAGCAATT 739
|||||||||||||||||||||| | |||||||||||| ||| ||| |||||||||||||
Sbjct 1318 GGTCGGAAATATCAGTAGCAATGTTGAAGACTATGAGCTGAAGGTCCTTTTTGAGCAATT 1377
Query 740 TGGAGAAATCCAGGCTCTTCATACAGCTTGCAAAAATCGTGGCTTTATCATGGTATCGTA 799
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1378 TGGAGACATCCAGGCTCTTCATACAGCTTGCAAAAATCGTGGCTTTATCATGGTATCGTA 1437
Query 800 CTATGATATAAGGGCTGCTCAGAATGCGGCGAGAGCACTCCAGAATAAGCTGTTAAGAGG 859
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1438 CTGTGATATAAGGGCTGCTCAGAATGCGGCGAGAGCACTCCAGAATAAGCTGTTAAGAGG 1497
Query 860 AACAAAACTTGACATTCGTTATTCTATCTCTAAGGAAAATCCTTTAGAAAAGGATACATG 919
|||||||||||||||||||||||||||||||||||||||||||| | |||| |||||| |
Sbjct 1498 AACAAAACTTGACATTCGTTATTCTATCTCTAAGGAAAATCCTTCACAAAAAGATACAAG 1557
Query 920 TAAAGGAGCCTTGTTGGTTAATAATCTCGATTCTTCTATTTCGAATCAAGAGCTCAATCG 979
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1558 TAAAGGAGCCTTGTTGGTTAATAATCTCGATTCTTCTATTTCGAATCAAGAGCTGAATCG 1617
Query 980 CCTGGTCAAATCATATGGAGAGATCAAAGAGATCCGTAGAACCATGCATGATAACCCACA 1039
||||||||||| ||||||||| |||||||||| ||||| ||||||||||||||| ||||
Sbjct 1618 ACTGGTCAAATCGTATGGAGAGGTCAAAGAGATTCGTAGGACCATGCATGATAACTCACA 1677
Query 1040 GATATACATAGAGTTCTTTGACGTTCGAGCAGCAGCAGCTGCTCTTGGTGGACTAAATGG 1099
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1678 GATATACATAGAGTTCTTTGACGTTCGAGCTGCAGCAGCTGCTCTTGGTGGACTAAATGG 1737
Query 1100 ACTTGAGGTTGCCGGGAAGAAGCTCCAACTGGTGGCGACCTGTCCAGAGGGTACAAGATA 1159
|||||||||||| ||||||||||| ||||| ||| |||||| ||||||||||||||||||
Sbjct 1738 ACTTGAGGTTGCTGGGAAGAAGCTTCAACTTGTGCCGACCTATCCAGAGGGTACAAGATA 1797
Query 1160 CACGTCACAGGGTGCTGCACATGATACTGAAGGGTGTCTACCTAAAACGTCTTATAGTAA 1219
|||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1798 CACGTCGCAGTGTGCTGCAAATGATACTGAAGGGTGTCTACCTAAAACGTCTTATAGTAA 1857
Query 1220 TACATCATCGGGACACATAGGTAGACATTTCCCAGGAATGATGTCTTCAACCTCCAATGA 1279
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct 1858 TACATCATCGGGACACATAGGTAGACATTTCCCAGGAATGATTTCTTCAACCTCCAGTGA 1917
Query 1280 TGGTGGATCTATGCGGGTTATACATAATTCTGTCGGATCACCTGTGAATTCCTTCATTGA 1339
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 1918 TGGTGGATCTATGCGGGTTATACATAATTCTATTGGATCACCTGTGAATTCCTTCATTGA 1977
Query 1340 ACGGCATCGGAGTCTCAGCATTCCTATTGGATTCCCACCCTCAGCAAACGCCATCTCAGC 1399
||| ||||| ||||||||||||||||||||||||||||| || ||||||| |||||||||
Sbjct 1978 ACGACATCGTAGTCTCAGCATTCCTATTGGATTCCCACCTTCGGCAAACGGCATCTCAGC 2037
Query 1400 CAGCAAACCTGTAGGACTTCAGGAGCATGGCCACCATTTTGATAATTCAAATATGGGGAT 1459
|| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2038 AAGTAAGCCTGTAGGACTTCAGGAGCATGGCCACCATTTTGATAATTCAAATATGGGGAT 2097
Query 1460 CCAAAGCATGCCAAATCTCCATCCTCATTCTTTTTCAGATTACGTGGACAACTTTGCAAA 1519
|||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||
Sbjct 2098 CCAAAGCATGCCAAATCTCCATCCTCATTCTTTTTCGGAGTACGTCGACAACTTTGCAAA 2157
Query 1520 TGGTAGTCCATATAAGTCCTCTGCATTTTCTGAAATGGTCAATGATGGCTCAAAAGCAAA 1579
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2158 TGGTAGTCCATATACGTCCTCTGCATTTTCTGAAATGGTCAGTGATGGCTCAAAAGCAAA 2217
Query 1580 TGAAAGCTTTATGATACATAATGTTCGTGGAGTGGATGGCTTTAGTGGAGGGGGTATAGG 1639
|||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 2218 TGAAGGCTTTATGATACATAATGTTCGTGGAGTGGAAGGCTTTAGTGGAGGCGGTATAGG 2277
Query 1640 ATCTCCCATGCATCAAAGCTCCCGCCGCCCTAACCTTAATTTATGGAGCAACTCTAACAC 1699
||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||
Sbjct 2278 ATCTCCCATGCATCAAAGCTCTCGCCGCCCT-A--TTAATTTATGGAGCAACTCTAACAC 2334
Query 1700 TCAGCAACAGAATCCGTCAAGTGGCATGATGTGGCCTAACTCGCCATCTCACATCAACAG 1759
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2335 TCAGCAACAAAATCCGTCAAGTGGCATGATGTGGCCTAACTCGCCATCTCACATCAACAG 2394
Query 1760 CATTCCTACTCAGCGCCCACCTGTTACTGTATTCTCTAGAGCACCTCCTATAATGGTGAA 1819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2395 CATTCCTACTCAGCGCCCACCTGTTACTGTATTCTCTAGAGCACCTCCTATAATGGTGAA 2454
Query 1820 TATGGCATCTTCCCCTGTGCATCATCATATTGGATCTGCGCCGGTATTAAACTCGCCTTT 1879
||||||||||||||||||||| || || ||||||||||||||||||||||| || |||||
Sbjct 2455 TATGGCATCTTCCCCTGTGCACCACCACATTGGATCTGCGCCGGTATTAAATTCTCCTTT 2514
Query 1880 CTGGGACAGAAGACAAGCCTATGTAGCTGAATCTCTAGAATCATCTGGCTTCCACATAGG 1939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2515 CTGGGACAGAAGACAAGCCTATGTAGCTGAATCTCTAGAATCATCTGGCTTCCACATAGG 2574
Query 1940 TTCT--T-----CA--------CC---CTC---AC-ATC-CA---A-TGGACATTGGTTC 1972
|||| | || || ||| || ||| || | |||||||||||||
Sbjct 2575 TTCTCATGGTAGCATGGGGATTCCTGGCTCTTCACCATCACATCCAATGGACATTGGTTC 2634
Query 1973 TCATAAGACTTTCTCTGTTGGTGGGAATCGTATGGATGTAACTTCCCAAAATGCTGTACT 2032
|||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||
Sbjct 2635 TCATAAGACTTTCTCTGTTGGTGGGAATCGCATGGATGTAAATTCCCAAAATGCTGTCCT 2694
Query 2033 GCGATCTCCTCAACAGTTGTCTCATCTCTTTCCTGGAAGGAGTCCAATGGGTTCGATGCC 2092
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2695 GCGATCTCCTCAACAGTTATCTCATCTCTTTCCTGGAAGGAGTCCAATGGGTTCGATGCC 2754
Query 2093 AGGGTCGTTTGACTCGCCAAATGAAAGATACAGGAATCTCTCTCACCGTAGAAGCGAATC 2152
|||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct 2755 AGGGTCATTTGACTCGCCAAATGAACGATACAGGAATCTCTCTCACCGAAGAAGCGAATC 2814
Query 2153 TAGCTCTAGCAATGCTGACAAGAAACTGTATGAGCTTGACGTTGACCGTATATTACGTGG 2212
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2815 TAGCTCTAGCAATGCTGACAAAAAACTGTATGAGCTTGACGTTGACCGTATATTACGTGG 2874
Query 2213 GGATGACAGGAGGACAACTTTGATGATTAAAAACATTCCTAACAAGTACACTTCTAAGAT 2272
||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 2875 GGAGGACAGGAGGACAACATTGATGATTAAAAACATTCCTAACAAGTACACTTCGAAGAT 2934
Query 2273 GCTTCTATCTGCTATTGACGAGCACTGTAAAGGAACTTATGATTTCCTTTATTTGCCAAT 2332
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2935 GCTTCTATCTGCTATTGACGAGCATTGTAAAGGAACTTATGATTTCCTTTATTTGCCAAT 2994
Query 2333 TGACTTCAAGAACAAATGCAATGTGGGATATGCTTTCATCAATCTTATTGAACCTGAAAA 2392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2995 TGACTTCAAGAACAAATGCAATGTGGGATATGCTTTCATCAATCTTATTGAACCTGAAAA 3054
Query 2393 GATTGTCCCATTTTTTAAGGCATTTAATGGCAAAAAGTGGGAAAAGTTCAATAGCGAGAA 2452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3055 GATTGTCCCATTTTTTAAGGCATTTAATGGCAAAAAGTGGGAAAAGTTCAATAGCGAGAA 3114
Query 2453 GGTGGCAACGCTTACGTATGCTCGTATCCAAGGGAAAACAGCTCTTATTGCCCATTTCCA 2512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3115 GGTGGCAACGCTTACGTATGCTCGTATCCAAGGGAAAACAGCTCTTATTGCCCATTTCCA 3174
Query 2513 GAATTCAAGCTTAATGAACGAAGACAAACGTTGCAGACCTATTCTCTTCCACACTGACGG 2572
||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct 3175 GAACTCAAGCTTAATGAACGAAGACAAACGTTGCCGACCTATTCTCTTCCACACTGATGG 3234
Query 2573 TCCAAATGCTGGTGATCAGGAACCATTTCCAATGGGAAGCAACATACGATCAAGACCAGG 2632
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 3235 TCCAAATGCTGGTGATCAGGAACCATTTCCAATGGGAAGCAACATACGGTCAAGACCAGG 3294
Query 2633 AAAGCCACGAAGCAGTAGCATTGATAACTACAACAGCTTTAGCATCTCTTCTGTTTCTGA 2692
||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 3295 CAAGCCACGAAGCAGTAGCATTGACAACTACAACAGCTTTAGCATCTCTTCCGTTTCTGA 3354
Query 2693 AAACCGAGAAGAACCTCCTAATGGAACTGATCCGTTCT 2730
||||||||||||| ||||||||||||||||||||||||
Sbjct 3355 AAACCGAGAAGAAACTCCTAATGGAACTGATCCGTTCT 3392
> AT5G07290.1 | Symbols: AML4, ML4 | MEI2-like 4 | chr5:2293353-2298976
FORWARD LENGTH=3695
Length=3695
Score = 1975 bits (1069), Expect = 0.0
Identities = 2215/2747 (81%), Gaps = 164/2747 (6%)
Strand=Plus/Plus
Query 21 ATGCCGTCTGATATTA-TGGAACAGAGAGGTGTTTCAACACCTTCCCACTTTCATGATGA 79
||||| ||||||| || |||||| ||||||||| | |||||||| || |||||||| ||
Sbjct 487 ATGCCATCTGATA-TATTGGAACCGAGAGGTGTGCCTACACCTTCTCATTTTCATGAAGA 545
Query 80 TATTCATATTACTTCAGAGAGGCAATTTGGGTTT-ATG-AAAACAGA-CCTGATGCCTGA 136
|||| || ||| | |||| |||||| ||||| ||| |||||| | || |||||||
Sbjct 546 CATTCGCATCACTCCTGAGAAACAATTT-GGTTTCATGAAAAACA-ATCC-AATGCCTG- 601
Query 137 AAACCAAGGTGGTCGT-GATAGACTTTCAAGTATGCCAAAGAGTTCCTGGACATCTGAAA 195
|||||||| || |||||| ||||| | | || | ||||| ||||||||||| |
Sbjct 602 -----AAGGTGGT-GTGGATAGAAGTTCAAATCTACCGACTAGTTCTTGGACATCTGACA 655
Query 196 GTTACCAGCTGAAGCCACAATCTAGTTTTTCTGGGTCACACT-CCT-CTGTTAGCCCTAA 253
|||||||||| | |||||| || || |||||| | | | ||| || ||| ||||||
Sbjct 656 GTTACCAGCTCTCTCAACAATCAAGCTTGTCTGGGGCGC-TTCCCTCCT-TTATCCCTAA 713
Query 254 CT-CAAGAAAC-ACTACAAATGGTAGTCAGTGGGAAAGCAGTTTATTTTCCAGCTCAATG 311
| ||| ||| |||||||||| || ||| ||||| |||||| |||| || ||||| ||
Sbjct 714 -TGGAAG-AACAACTACAAATGATACTCACTGGGAGAGCAGTCTATTCTCAAGCTCTCTG 771
Query 312 TCTGATTTGTTTAGTAGAAAACTGCGGCTA-CAAGGAAGTGATATGCTATCCACTATGTC 370
||||| | |||||||||||| | || ||| ||| ||||||||| | || || ||||||
Sbjct 772 TCTGACCTATTTAGTAGAAAATTACGACTACCAA-GAAGTGATAAGTTAGCCTTTATGTC 830
Query 371 TGCAAACACAGTTGTTACCCACCGTGAAGAAGAACCGTCTGAATCTTTAGAAGAGATTGA 430
||||||| | | | || |||||||| || || || |||||||| || ||
Sbjct 831 TGCAAAC-C----G--------C--GAGGAAGAACCTTCAGAGTCCTTAGAAGAAATGGA 875
Query 431 GGCACAAACTATTGGAAATCTTCTCCCAGATGAAGATGATCTTTTTGCGGAAGTGACAGG 490
||| |||||||||||||||||||| || ||||| |||||||||||||| |||||| ||
Sbjct 876 GGCGCAAACTATTGGAAATCTTCTTCCTGATGAGGATGATCTTTTTGCAGAAGTGGTTGG 935
Query 491 TGAGGTTGGGCGTAAATCTCGTGCTAATACTGGAGATGATTTGGATGAGTT-TGACCTCT 549
||||| || | ||| |||||||| ||| |||||||||||||||||| || |||||| |
Sbjct 936 TGAGGGTGTCCATAAGTCTCGTGCCAATGGTGGAGATGATTTGGATGA-TTGTGACCTAT 994
Query 550 TCAGCAGTGTTGGTGGCATGGAACTAGATGGAGATGTTTTTTCTTCTGTGAGTCATAGAA 609
|||||||||||||||||||||||||||||||||||||||| || ||||| ||||| |||
Sbjct 995 TCAGCAGTGTTGGTGGCATGGAACTAGATGGAGATGTTTTCTCCTCTGTCAGTCAAAGAG 1054
Query 610 ATGGTGAGAGAGGTGGCAATAATT---CTGTTGGC-GAACTTCATCGTGGGGAAATTCCA 665
|||| ||||||| ||||| || ||||| || || | || || || |||||| |
Sbjct 1055 ATGGCAAGAGAGGCAGCAATGTTTCGACTGTT-GCTGAGCATCCTCAAGGAGAAATTTTA 1113
Query 666 TCCAGAACAC-TTTTGGTCGGAAATATCAG-TAGCAATATCGAAGACTATGAGTTGAGGG 723
||||||| || ||||| | || ||| | | ||||| || ||||| | ||| || |||
Sbjct 1114 TCCAGAATACTTTTTGTTAGG-AATGT-GGATAGCAGCATTGAAGATTGCGAGCTGGGGG 1171
Query 724 TTATTTTTGAGCAATTTGGAGAAATCCAGGCTCTTCATACAGCTTGCAAAAATCGTGGCT 783
| ||||| ||||||||||||| | | |||||||||||||||| |||| ||||||||||
Sbjct 1172 TCCTTTTTAAGCAATTTGGAGATGTTCGGGCTCTTCATACAGCTGGCAAGAATCGTGGCT 1231
Query 784 TTATCATGGTATCGTACTATGATATAAGGGCTGCTCAGAATGCGGCGAGAGCACTCCA-G 842
||||||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||| |
Sbjct 1232 TTATCATGGTATCATACTATGATATAAGAGCTGCTCAGAAAGCGGCAAGAGCACTCCACG 1291
Query 843 AATAAGCTGTTAAGAGGAACAAAACTTGACATTCGTTATTCTA-TCTCTAAGGAAAATCC 901
|| ||| ||||| |||| || ||||| ||||| ||||||| || | |||||||||||
Sbjct 1292 -GTAGGCTCTTAAGGGGAAGGAAGCTTGATATTCGCTATTCTATTC-CAAAGGAAAATCC 1349
Query 902 TTTAGAAAAGGA-TACATGTAAAGGAGCCTTGTTGGTTAATAATCTCGATTCTTCTATTT 960
|| || || | | || | |||||||||||| ||| |||||||| ||||||||||| |
Sbjct 1350 --TA-AAGAGAACTCCA-GCGAAGGAGCCTTGTGGGTAAATAATCTTGATTCTTCTATAT 1405
Query 961 CGAATCAAGAGC-TCAATC-GCCTGGTCAAATCATATGGAGAGATCAAAGAGATCCGTAG 1018
| ||| |||||| || | | | | ||| ||||||||||| || | |||| | |||||
Sbjct 1406 CCAATGAAGAGCTTC-A-CGGTATATTCAGTTCATATGGAGAAATTAGAGAGGTTCGTAG 1463
Query 1019 AACCATGCATGATAACCCAC-AGATATACATAGAGTTCTTTGACGTTCGAGCA-GCAGCA 1076
||| |||||||| ||| ||| || | ||||||||||||||||| |||||| | ||| |
Sbjct 1464 AACGATGCATGAGAACTCACAAG-TTTACATAGAGTTCTTTGATGTTCGA-AAGGCA-AA 1520
Query 1077 -GCTGCTCTTGGTGGACTAAATGGACTTGAGGTTGCCGGGAAGAAGCTCCAACTGGTGGC 1135
| ||| ||| |||||||||||||||||||| || |||| | |||| |||| | |
Sbjct 1521 GGTTGCACTTCAAGGACTAAATGGACTTGAGGTCGCTGGGAGGCAGCTTAAACTTGCACC 1580
Query 1136 GACCTGTCCAGAGGGTACAAGATACACGTCACAGGGT-GCTGCACATGATACTGAAGGGT 1194
|||||||||||||||||||| | | | |||| | | ||| || ||||| ||| |||
Sbjct 1581 AACCTGTCCAGAGGGTACAAGTTTCTGGCCACA-GTTCGCTTCAGATGATGGTGAGGGGG 1639
Query 1195 GTCTACCTAAAACGTCTTATAGTAATAC-ATCATCGGGACACATAGGTAGACATTTCCCA 1253
|||||||||||| | ||| || ||| | |||||| | ||||| || ||||||||||||
Sbjct 1640 GTCTACCTAAAATGGCTTTTAATAA-CCTATCATCAGCTCACATGGGGAGACATTTCCCA 1698
Query 1254 GGAATGA-T-GTCTTCAACCTCCAATGATGGTGGATCTATGCG-GGTTATACATAATTCT 1310
||||| | | | |||||||||||| ||||||||||||||| || || ||| || ||||||
Sbjct 1699 GGAAT-ATTAG-CTTCAACCTCCATTGATGGTGGATCTATTCGAGG-TATGCACAATTCT 1755
Query 1311 GTCGGATCACCTGTGAATTCCTTCATTGAACGGCATCGGAGTCTCAGCA--TTCCTATTG 1368
|| || |||||| |||| |||||||||||||| |||| ||||||| | | |||||||||
Sbjct 1756 GTTGGGTCACCTATGAACTCCTTCATTGAACGTCATCAGAGTCTC-G-ATGTTCCTATTG 1813
Query 1369 GATTCCCACCCTCAGCAA-ACGCCATCTCAGCCAGCAAACCTGTAGGACTTCAGGAGCAT 1427
| || ||||| || |||| | | ||||||||| ||||| ||||| || ||||||||| |
Sbjct 1814 GTTTGCCACCATCGGCAAGA-GTCATCTCAGCTAGCAAGCCTGTTGGTCTTCAGGAGTTT 1872
Query 1428 GGCCA-CCATTTTGATAATTC-AAATATGGGGATCCAAAGCATGCCAAATCTCCATCCTC 1485
|| | ||| ||||||||||| ||| | |||||||||||| |||||||||||||||||||
Sbjct 1873 GGAAACCCA-TTTGATAATTCGAAA-ACGGGGATCCAAAGTATGCCAAATCTCCATCCTC 1930
Query 1486 ATTCTTTTTCAGATTACGTGGACAACTTTGCAAATGGTAGTCCATATAAGTCCTCT--G- 1542
| |||| | |||||| | ||||||||||||| |||||||||||||| |||||| |
Sbjct 1931 A---TTTTCCTGATTACCTTGACAACTTTGCAAGCGGTAGTCCATATAAATCCTCTACGA 1987
Query 1543 CATTTTCTGAAATGGTCAA-TGATGGCTC-AAAAGCAAATGAAAGCTTTATGATACA-TA 1599
|||| ||||||||||| || |||||| | |||||||||||| |||||||||| | |
Sbjct 1988 CATTCTCTGAAATGGT-AAGCGATGGC-CAAAAAGCAAATGAGGGCTTTATGAT-GAGCA 2044
Query 1600 ATGTTCGTGGAGT----G--GATGGCTTTAGTGGAGGGGGT-ATAGGATCTCCCATGCAT 1652
||||||||||||| | ||||| |||| |||| || || |||||||||||||| ||
Sbjct 2045 ATGTTCGTGGAGTGGGAGTAGATGGATTTAATGGA-GGTGTCATAGGATCTCCCATAAAT 2103
Query 1653 CAAAGCTCCCGCCGCCCTAACCTTAATTTATGGAGCAACTCTAACACTCAGCAACAGAAT 1712
||| | |||| || |||||| || |||||||| |||||||||| ||||||||| |||
Sbjct 2104 CAAGGATCCCATCGTGGTAACCTCAACTTATGGAGTAACTCTAACAGTCAGCAACATAAT 2163
Query 1713 CCGTCAAGTGGCATGATGTGGCCTAACTCGCCATCTCACATCAACAGCATT-CCTACTCA 1771
| ||||||||||||||||||||||||||| ||||||| | ||||| || || ||| ||||
Sbjct 2164 CAGTCAAGTGGCATGATGTGGCCTAACTCACCATCTCGCGTCAACGGCGTTCCCT-CTCA 2222
Query 1772 GCG---CCCACCTGTTACTGTATTCTCTAGAGCACCTCCTATAATGGTGAATATGGCATC 1828
||| |||||||||||||| ||||||||||||| ||||| |||||||||| ||||||||
Sbjct 2223 GCGCATCCCACCTGTTACTGCATTCTCTAGAGCATCTCCTTTAATGGTGAACATGGCATC 2282
Query 1829 TTCCCCTGTGCATCATCATATTGGATCTGCGCCGGTATTAAACTCGCCTTTCTGGGACAG 1888
|| |||||||| || || ||||||||||| |||||||||||||| ||||| ||||| ||
Sbjct 2283 ATCGCCTGTGCACCACCACATTGGATCTGCCCCGGTATTAAACTCACCTTTTTGGGATAG 2342
Query 1889 AAGACAAGCCTATGTAGCTGAATCTCTAGAA---TC---A--T--C-T-GG--CTTCC-- 1932
|||||| || |||||||||||||||| |||| || | | | | || || ||
Sbjct 2343 AAGACAGGCATATGTAGCTGAATCTCCAGAATCTTCAGGATTTCACTTAGGTTCTCCCGG 2402
Query 1933 -A-CATAGG---T--T--CT--TCACCCTCACATCCAATGGACATTGGTTCTCATAA-G- 1979
| ||| || | | || || ||||||||||||||||| ||||||||||||| |
Sbjct 2403 TAGCATGGGATTTCCTGGCTCGTCTCCCTCACATCCAATGGATTTTGGTTCTCATAAGGT 2462
Query 1980 ACTTTCTC-TGTTGGTGGGAATCGTATGGATG-TAACTTCCCAAAATGCTGTACTGCGAT 2037
|||||| ||| ||||||||||| ||||| | || ||| ||||||||||| | ||||
Sbjct 2463 TTTTTCTCATGTCGGTGGGAATCGCATGGAGGCCAA-TTCAAAAAATGCTGTATTACGAT 2521
Query 2038 C-TCCTCAACAGTTGTCTCATCTCTTTCCTGGAAGGAGTCCAATGGGTTCGA-TGCCAGG 2095
| | | | |||| || |||| |||||| |||||||||| |||||| ||| | || ||||
Sbjct 2522 CAT-CGCGACAGATGCCTCACCTCTTTACTGGAAGGAGCCCAATGCTTTC-AGTGTCAGG 2579
Query 2096 GTCGTTTGACTCGCCAAATGAAAGATACAGGAATCTCTCTCACCGTAGAAGCGAATCTAG 2155
|| ||||||| ||| |||||| |||||||||||||||||||||| ||||| |||||||
Sbjct 2580 CTCATTTGACTTGCCTAATGAACGATACAGGAATCTCTCTCACCGAAGAAGTGAATCTAA 2639
Query 2156 CTCTAGCAATGCTGACAAGAAACTGTATGAGCTTGACGTTGACCGTATATTACGTGGGGA 2215
|||||| |||||||| |||||||||||||||||||| || || || ||||||||||||||
Sbjct 2640 CTCTAGTAATGCTGAAAAGAAACTGTATGAGCTTGATGTAGATCGCATATTACGTGGGGA 2699
Query 2216 TGACAGGAGGACAACTTTGATGATTAAA-AACATTCCTAACAAGTACACTTCTAAGATGC 2274
||||| || ||||| ||||||| |||| ||||||||||| ||||| |||||||||||||
Sbjct 2700 AGACAGTAGAACAACGTTGATGA-TAAAGAACATTCCTAATAAGTATACTTCTAAGATGC 2758
Query 2275 TTCTATCTGCTATTGACGAGCACTGTAAAGGAACTTATGATTTCCTTTATTTGCCAATTG 2334
| ||| |||||||||| ||| ||||||||||||| |||||||| ||||||||||||||||
Sbjct 2759 TCCTAGCTGCTATTGATGAGTACTGTAAAGGAACATATGATTTTCTTTATTTGCCAATTG 2818
Query 2335 ACTTCAAGAACAAATGCAATGTGGGATATGCTTTCATCAATCTTATTGAACCTGAAAAGA 2394
|||||||||| ||||||||||| ||||||||||||||||| ||||| ||||||||||| |
Sbjct 2819 ACTTCAAGAATAAATGCAATGTCGGATATGCTTTCATCAACCTTATCGAACCTGAAAATA 2878
Query 2395 TTGTCCCATTTTTTAAGGCATTTAATGGCAA-AAAGTGGGAAAAGTTCAATAGCGAGAAG 2453
|||| || |||| ||||||||| || || || ||| |||||||||||||| |||||||||
Sbjct 2879 TTGTTCCGTTTTATAAGGCATTCAACGGTAAGAAA-TGGGAAAAGTTCAACAGCGAGAAG 2937
Query 2454 GTGGCAACGCTTACGTATGCTCGTATCCAAGGGAAAACAGCTCTTATTGCCCATTTCCAG 2513
|||||| ||||| | |||| ||| || || |||||| |||||||||||||||||||||||
Sbjct 2938 GTGGCATCGCTTGCATATGGTCGGATTCAGGGGAAATCAGCTCTTATTGCCCATTTCCAG 2997
Query 2514 AATTCAAGCTTAATGAACGAAGACAAACGTTGCAGACCTATTCTCTTCCACACTGAC-GG 2572
|| ||||| || ||||||||||||||||||||||| ||||||||||||||||||| | ||
Sbjct 2998 AACTCAAGTTTGATGAACGAAGACAAACGTTGCAGGCCTATTCTCTTCCACACTG-CTGG 3056
Query 2573 TCCAAATGCTGGTGATCAGGAACCATTTCCAATGGGAAGCAA-CATACGATCAAGACCAG 2631
|||||||||||||||||||||||||||||||||||| ||| ||| || ||||||||||
Sbjct 3057 TCCAAATGCTGGTGATCAGGAACCATTTCCAATGGGTT-CAAACATCCGGTCAAGACCAG 3115
Query 2632 GAAAGCCA-CGAAGCAG-TAGCATTGATAACTACAACAGCTTTAGCA 2676
| |||| | |||| || |||||| || ||||||| || ||||||||
Sbjct 3116 GCAAGC-ATCGAA-CAAATAGCATCGAGAACTACACCAACTTTAGCA 3160
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 136704919675
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5