BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg951011
Length=1384
Score E
Sequences producing significant alignments: (Bits) Value
AT5G62390.1 | Symbols: ATBAG7, BAG7 | BCL-2-associated athanoge... 2132 0.0
> AT5G62390.1 | Symbols: ATBAG7, BAG7 | BCL-2-associated athanogene
7 | chr5:25051978-25054289 REVERSE LENGTH=1859
Length=1859
Score = 2132 bits (1154), Expect = 0.0
Identities = 1316/1392 (95%), Gaps = 19/1392 (1%)
Strand=Plus/Plus
Query 1 AAACACT-TAAAAACAAAACCATGAGTTGGTTCCATAGACTCGATCTCATCGATCCGTAC 59
||||||| | ||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 100 AAACACTCT-AAAACAAAACCATGACTTTGTTCCATAGACTCGATCTCATCGATCCGTAC 158
Query 60 ACGTGTTCACCACTCATCGTCCGTGAAACCTCCATTGTTGAACCTTCTTCATTGTTCTTA 119
|||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 159 ACGTGTACACCACTCATCGTCCGTGAAACCTCCATTGTTGAACCTTCATCATTGTTCCTA 218
Query 120 GGGTTTCCTTCCTTCATCGACGAAGATGTTGAAGATCTCTTCGACTTTTCATCACCTAGT 179
|||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |
Sbjct 219 GGGTTTCCTTCCTTCATCGACGAAGACATTGAAGATCTCTTCGAGTTTTCATCACCTAAT 278
Query 180 CCTCTCGATCTATTCGAAACCGTGACGGATCTGGTTCAGATTGAGAAATCTCCGTCGTCT 239
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 279 CCTCTCGATCTATTCGAAACCGTGACGGATCTGGTTAAGATTAAGAAATCTCCGTCGTCT 338
Query 240 TGCAAGTACAAGGTGATTCGTCGGAGATTGGAGCCGGAGTATCCATTGAAGTATCTTTGT 299
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 339 TGCAAGTACAAGGTGATTCGTCGGAGATTAGAGCCGGAGTATCCATTGAAGTATCTTTGT 398
Query 300 GACCGTGTTTCTGATTTGGAATCCAAGTTTGATAGATTGGTTAGTCCTAAGAGTGATAGG 359
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 399 GACCGTGTTTCTGATTTGGAATCAAAGTTTGATAGATTGGTTAGTCCTAAGAGTGATAGG 458
Query 360 AAGTATACATTGACGAAGGAGATTAAGGGAAGTGGTGAGAGGAAGTATAAATGGGAAGCG 419
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 459 AAGTATACATTGACGAAGGAGATAAAGGGAAGTGGTGAGAGGAAGTATAAATGGGAGGCG 518
Query 420 GAGATTCAGGGACCGCCGGAGAGGAAGTATAAGTTGGAAGCTGAGATTGAAGGTTCGGGA 479
|||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GAGATTCAAGGACCGTTGGAGAGGAAGTATAAGTTGGAAGCTGAGATTGAAGGTTCGGGA 578
Query 480 GAGAGCAAGTATAAATGGACGACGGAGATTAAAGGAGGGAAGAAGGATGAGGAAGGGTTA 539
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 579 GAGAGGAAGTATAGATGGACGACGGAGATTAAAGGAGGGAAGAAGGATGAGGAAGGGTTA 638
Query 540 AAGTTAGCTGCTTTgaagaaggagaaggc----g--aaagctattgctgctgctgaagcg 593
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct 639 AAGTTAGCTGCTTTGAAGAAGGAGAAGGCGAAAGCTAAAGCTATTGCTGCTGCTGAAGCG 698
Query 594 gagaagaagaataagaataagaagaagaagagttacaattggacgacggaggtgaagagt 653
||||||||||| || || || |||||||||||||| ||||||||||||||||||||||||
Sbjct 699 GAGAAGAAGAAGAATAAGAATAAGAAGAAGAGTTATAATTGGACGACGGAGGTGAAGAGT 758
Query 654 gagagagagaatggagagaTTTCGCACACTTATATCATCAAGGCTTCTACTggaggggag 713
|||||||||||||| ||| ||||||| |||||||||||||||||| |||||||||| |||
Sbjct 759 GAGAGAGAGAATGGTGAGGTTTCGCATACTTATATCATCAAGGCTACTACTGGAGGAGAG 818
Query 714 aaaaagaagaaacatgaggagaaggagaagaaggagaagaaagagaaggtagagactaag 773
|||||||||||||||||||||||||||||||| || || | || | |||||||||||
Sbjct 819 AAAAAGAAGAAACATGAGGAGAAGGAGAAGAA--AG-AG--A-AG-A--TAGAGACTAAG 869
Query 774 agcaagaagaaggagaaAACTCGTGTTGTGGTGATCGAGGAGGAGGAAGAAGAAGATGAT 833
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 870 AGCAAGAAGAAGGAGAAAACTCGTGTTGTGGTGATTGAGGAGGAGGAAGAAGAAGATGAT 929
Query 834 GAGTCGGCAGAACATGGAGCTATTGTTCTCAGGAAGGCGTTTTCCAGAA-GAACTGGAGC 892
|||||| |||||||||| ||||| ||||| ||||||||||||||||||| ||| ||||||
Sbjct 930 GAGTCGTCAGAACATGGTGCTATCGTTCTTAGGAAGGCGTTTTCCAGAAGGAA-TGGAGC 988
Query 893 AGTTAGGACCAAGAAGGGGAAGAACAAGGAAATGCCACCTGAATATGCGGCTGTGATGAT 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 989 AGTTAGGACCAAGAAGGGGAAGAACAAGGAAATGCCACCTGAATATGCGGCTGTGATGAT 1048
Query 953 CCAGAGGGCCTTCAAAGCTTATTTGATTCGCCGTTCAAAATCATTGCGTGCTCTTCGTGA 1012
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 1049 CCAGAGGGCCTTCAAAGCTTATTTGATTCGTCGCTCAAAATCATTGCGTGCTCTTCGTGA 1108
Query 1013 TCTAGCTATTGCGAAGACTAAACTGAAGGAGCTTAGAGCTTCGTTCCACAACTTCAGCTA 1072
||| |||||||| ||||||||||| |||||||| |||||||| |||||||||||||||||
Sbjct 1109 TCTTGCTATTGCAAAGACTAAACTTAAGGAGCTAAGAGCTTCTTTCCACAACTTCAGCTA 1168
Query 1073 CCGTCGCCTGATTGCTCGTGACGCAGAGGAGCGCCAGAAATTCTCAGAGAAGATCATTGT 1132
||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||
Sbjct 1169 CCGTCGCCTGATTGCTCGTGATGGAGAGGAGCGTCAGAAATTCTCAGAGAAGATCATTGT 1228
Query 1133 ACTTCTCCTCACAGTTGATGCCATAGAGGGAGTTGATGTAATGGTTCGAGGAGCGAAAAG 1192
||| |||||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||
Sbjct 1229 ACTCCTCCTCACTGTTGACGCCATAGAGGGAGTTGATGTGATGGTTCGAGGAGCGAAGAG 1288
Query 1193 ATCAATGGTGGATGAGCTGGAAGCAATGTTGGATGTGGTAGACCCGCAACCACAGGGGAA 1252
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 1289 ATCAATGGTGGATGAGCTGGAAGCAATGTTAGATGTGGTAGACCCGCAACCGCAGGGGAA 1348
Query 1253 ATCATTGTCGATGAGAAGAAGAACATTCGATATGCCAGACAGTTTGATCCGCAAAGAAAT 1312
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1349 ATCATTGTCGATGAGAAGAAGAACATTTGATATGCCAGACAGTTTGATCCGCAAAGAAAT 1408
Query 1313 CGCAGACGGAGTGACTCAGATCGTGCAGATGCTTGAAACAGAAGAAGAATAATGGAATGG 1372
|||||| |||||||||||||| ||||||||||||||||| |||||||||| |||||||||
Sbjct 1409 CGCAGAGGGAGTGACTCAGATTGTGCAGATGCTTGAAACGGAAGAAGAATGATGGAATGG 1468
Query 1373 AGCACTGTGTGT 1384
||||||||||||
Sbjct 1469 AGCACTGTGTGT 1480
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 68172340110
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5