BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg951209
Length=2169
Score E
Sequences producing significant alignments: (Bits) Value
AT5G63940.1 | Symbols: | Protein kinase protein with adenine n... 3454 0.0
AT1G77280.1 | Symbols: | Protein kinase protein with adenine n... 178 2e-43
> AT5G63940.1 | Symbols: | Protein kinase protein with adenine
nucleotide alpha hydrolases-like domain | chr5:25588075-25591458
FORWARD LENGTH=2526
Length=2526
Score = 3454 bits (1870), Expect = 0.0
Identities = 2055/2143 (96%), Gaps = 17/2143 (1%)
Strand=Plus/Plus
Query 19 AGATGAATCCGACTGGAGAAGGAGGAGGAGGCAAAGTCGCCGGAGTCGAAGAAACGGTGG 78
||||||| ||||| |||||||||||||| || |||||||| | | || ||||||
Sbjct 178 AGATGAAACCGACCGGAGAAGGAGGAGG-GG--AAGTCGCC---G--G-AG---CGGTGG 225
Query 79 CGGAAGGTTCGGCGTTGTTAATTGTGGGTGTAAAGCCAGATGAATGGAGTCGAGAGGTTC 138
||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||
Sbjct 226 CGGAAGGTTCGGCGTTGTTAATTGTAGGAGTAAAGCCAGATGAATGGAGTAGAGAGGTTC 285
Query 139 TTACATGGTCTTTGGTGAATGTAGCGCGTCCTGGAGATCGAATCGTTGCTCTTCATGTTC 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 286 TTACATGGTCTTTGGTGAATGTAGCGCGTCCTGGAGATCGAATCGTTGCTCTTCATGTTC 345
Query 199 TCGATTACTCTCTAGAGGGCTCAACGTCGCTTATTTCGTTGGTTAGGAATTTTGATACTA 258
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 346 TCGATTATTCTCTAGAGGGCTCAACGTCGCTTATTTCGTTGGTTAGGAATTTTGATACTA 405
Query 259 TGCTTGGTGTTTATGAAAGCTTCTGCAACTTAAAACAGGTAGATTTGAAGCTAAAGGTTT 318
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 406 TGCTTGGTGTTTATGAAAGCTTCTGCAACTTAAAACAGGTAGATTTGAAGTTGAAGGTTT 465
Query 319 TCAGAGGGAAGTCAGCTAGGAAAGTTCTTGTACAAGAAGTGAAATCGTGTGGAGCGACAA 378
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 466 TCAGAGGGAAGTCAGCTAGGAAAGTTCTTGTACAAGAAGTTAAATCGTGTGGAGCTACAA 525
Query 379 GTTTAATCGTTGGTTCCTCTAGGAAACATCACACTATCCGTTCTTCAGCTTCTTTAGCCA 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 526 GTTTAATCGTTGGTTCCTCTAGGAAACATCACACTATCCGTTCTTCAGCTTCTTTAGCCA 585
Query 439 AGTATTGTGCCAGGAATCTTGCCAAGGATGTCTCTGTTTTTGCTGTCAAGAGTGGCAAAA 498
|||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |
Sbjct 586 AGTATTGTGCCAGGAATCTTGCCAAGGATGTCTCTGTTTTTGCTGTTAAAAGTGGCAAGA 645
Query 499 TTATGTTCCGCAGAGTACCTAATACCAGTGGTGCAGATGGTCCACAGATGAATCTTCCCT 558
||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct 646 TTATGTTCCGCAGAGTACCTAATACCAATGGTGCAGATGGTCCACAGATGAATATTCCCT 705
Query 559 CTTTAGTTTGTGGATCACCTGACATTGCTATTGAAGCGGCAAAGATTGGAAACAGTTTTA 618
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 706 CTTTAGTTTGTGGATCACCAGATATTGCTATTGAAGCGGCAAAGATTGGAAACAGTTTTA 765
Query 619 GCCCTGCAAGAACGAGCTCACGCTGGACAAGAACTAGTCGTAGTTCATCATTGCAGTCTT 678
||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 766 GCCCTGCTAGAACGAGCTCACGCTGGACAAGAACTAGTCGTAGTTCGTCATTGCAGTCTC 825
Query 679 CTGAAAGCTTAGGTGTAGACAATTCGTTGGCTTTAGTGCCAGTACAAACAAATGAGACCG 738
|||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct 826 CTGACAGCTTAGGTGTAGACAATTTGTTGGCTTTAGTGCCAGTACAAACAAATGAGACTG 885
Query 739 ATTCTGGTTCCCTTGAGTCAGGACCAGGTTGGCATTTTCTTCGCGGGATTTACGGTAAT- 797
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 886 ATTCTGGTTCCCTTGAGTCAGGACCAGGTTGGCATTTTCTTCGCGGGCTTTACGGTAATA 945
Query 798 --CGAAAAAGTTGGCCCAAAGTCTCTGCTAAGAAGGCTGTACTTCAGTGGGTTTCCAGGC 855
|||||||| ||| ||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 946 ATCGAAAAAGCTGGACCAAAGTTTCTGCTAAGAAGGCTGTACTTCAGTGGGTTTCGAGGC 1005
Query 856 TGCGAGGTCGGCATTCAGAAACTGTAATCTATCTGGATAGGAAACGGAGTGACTCTGGTT 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1006 TGCGAGGTCGGCATTCAGAAACTGTAATCTATCTGGATAGGAAACGGAGTGACTCTGGTT 1065
Query 916 GTGATGAAGATTGCTCTTCTAGTATTGATGGTGAAGATGTTTCCATTTCACGATTTGGTT 975
||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||
Sbjct 1066 GTGATGAAGATTGCTCTTCTAGTATTGATGGTGAAGATGTTTCTATATCACGGTTTGGTT 1125
Query 976 CTGAGCTTATGCAGTCTCCTCTTTCTCCCTGCATTGGATCAAACAACATTCCAGAAGAGC 1035
|||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||
Sbjct 1126 CTGAGCTTATGCAGTCACCTCTTTCTCCTTTCATTGGATCAAACAACATTCCAGAAGAGC 1185
Query 1036 TGGAGGGTCTACACGAAAAATACTCTTCCACATGTAGATTATTCACATACGATGAAGTTT 1095
|||| |||||||| ||||| |||||||||||||||||||||||||||||||| ||||| |
Sbjct 1186 TGGAAGGTCTACATGAAAAGTACTCTTCCACATGTAGATTATTCACATACGAGGAAGTCT 1245
Query 1096 TGTCAATTACCTCAAACTTTGCATCCGAGAACTTGGTTGGAGAAGGTGGTGATAGTTATG 1155
||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct 1246 TGTCAATTACCTCAAACTTTGCATCTGAGAACTTGGTTGGAGAAGGTGGTAATAGTTATG 1305
Query 1156 TTTATAGAGGAGATCTACCAGATGGGAGGGAATTAGCTGTCAAAATATT-AAAGCCTTGT 1214
||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||
Sbjct 1306 TTTATAGAGGAGATCTACCAGATGGCAGGGAATTAGCTGTCAAAATATTGAAA-CCTTGT 1364
Query 1215 CTGGATGTGTTGAAGGAATTTATACTGGAAATTGAAGTCATTACCAGTGTACATCACAAA 1274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1365 CTGGATGTGTTGAAGGAATTTATACTGGAAATTGAAGTCATTACCAGTGTACATCACAAA 1424
Query 1275 AATATAGTATCTCTCTTTGGTTTCTGTTTTGAGAATAATAATTTGATGCTGGTGTACGAT 1334
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 1425 AATATAGTATCTCTCTTTGGTTTCTGTTTCGAGAATAATAATTTGATGCTGGTATACGAT 1484
Query 1335 TATCTACCACGAGGAAGCCTTGAAGAGAACCTTCATGGTAATAGAAAGGATGCaaaaaaa 1394
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 1485 TATCTACCACGAGGAAGCCTTGAAGAGAACCTTCATGGCAATAGAAAGGATGCAAAGAAA 1544
Query 1395 TTTGGCTGGCTGGAGAGATATAAGGTGGCAGTGGGTGTTGCCGAGGCGTTAGACTATCTA 1454
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1545 TTTGGCTGGATGGAGAGATATAAGGTGGCAGTGGGTGTTGCCGAGGCGTTAGACTATCTG 1604
Query 1455 CATAATACTCATGAGCCAGAAGTGATTCACCGGGATGTGAAATCTTCTAATGTTCTTTTG 1514
|||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 1605 CATAATACTCATGATCCAGAAGTAATTCACCGGGATGTCAAATCTTCTAATGTTCTTTTG 1664
Query 1515 GCAGATGATTTTGAGCCACAGCTCTCAGATTTCGGATTCGCCAGCTTGGCTTCAAGTACT 1574
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1665 GCAGATGATTTTGAGCCACAGCTCTCAGATTTCGGATTCGCCAGCTTGGCTTCAAGTACC 1724
Query 1575 TCGCAGCACGTGGCGGGTGGGGATATTGCTGGGACATTTGGTTACCTAGCACCAGAGTAC 1634
|| ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1725 TCACAGCATGTAGCGGGTGGGGATATTGCCGGGACATTTGGTTACCTAGCACCAGAGTAC 1784
Query 1635 TTCATGCACGGTAAAGTAACCGACAAGATCGATGTCTATGCTTTTGGTGTTGTATTGCTC 1694
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1785 TTCATGCACGGTAAAGTAACCGACAAGATTGATGTCTATGCTTTTGGTGTTGTATTGCTC 1844
Query 1695 GAGCTCCTATCGGGTAGAAAACCAATCTGCGTCGACCAGTCTAAAGGCCAGGAGAGCCTT 1754
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1845 GAGCTCATATCGGGTAGAAAACCAATCTGCGTCGACCAGTCTAAAGGCCAGGAGAGCCTT 1904
Query 1755 GTCTTGTGGGCAAACCCAATTCTAGAGAGTGGAAAGTTTGCTCAGTTACTGGATCCCAGT 1814
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1905 GTCTTGTGGGCAAACCCAATTCTAGATAGTGGAAAGTTTGCTCAGTTACTGGATCCCAGT 1964
Query 1815 CTAGAAAATGATAACAGTAACGATCTAGTCGAGAAACTATTGTTAGCTGCCACGCTATGC 1874
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1965 CTAGAAAATGATAACAGTAACGATCTAATCGAGAAACTATTGTTAGCTGCCACGCTATGC 2024
Query 1875 ATCAAACGCACACCTCATGACCGTCCGCAAATTGGCCTCGCCCTAAAGATCTTACAAGGG 1934
|||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||
Sbjct 2025 ATCAAACGCACACCTCATGACCGTCCGCAAATTGGCCTTGTCCTAAAGATATTACAAGGG 2084
Query 1935 GACGAAGAAGCAACAGAGTGGGGAAAGCAACAAGTGAGAGCCTCAGAAGACGAAAGCGCA 1994
|| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2085 GAAGAAGAAGCAACAGAGTGGGGAAAGCAACAAGTGAGAGCCTCAGAAGACGTGAGCGCA 2144
Query 1995 TATATGACAAATATAGAATCACACATAAACCTTGCATTGCTTGATTTGGAAGATGATGCG 2054
||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2145 TATTTGACAAATATAGAATCACACATAAACCTCGCATTGCTTGATTTGGAAGATGATGCA 2204
Query 2055 GCTTCTGATAGCAGCCCTGAAGCAAGCAGTATCTCTGTTGAGGAATACTTGAAAGGGCGA 2114
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 2205 GCTTCTGATAGCAGCCCTGAAGCTAGTAGTATCTCTGTTGAGGAATACTTGAAAGGGCGA 2264
Query 2115 TGGAGCCGCACTGCTAGCTTCAACTTCAACTAATAATTTTTAC 2157
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 2265 TGGAGCCGCACTGCTAGCTTCAACTTCAACTAATAATTTTTAC 2307
> AT1G77280.1 | Symbols: | Protein kinase protein with adenine
nucleotide alpha hydrolases-like domain | chr1:29031468-29035882
REVERSE LENGTH=2385
Length=2385
Score = 178 bits (96), Expect = 2e-43
Identities = 366/492 (74%), Gaps = 36/492 (7%)
Strand=Plus/Plus
Query 1329 TACGATTATCTAC-CACGAGGAAGCCTTGAAGAGAACCTTCATGGTAATA-GAAAGGATG 1386
||| ||||||| | || |||||||||||||||||||||||||||| || | ||||| ||
Sbjct 1549 TACAATTATCT-CTCAAGAGGAAGCCTTGAAGAGAACCTTCATGGAAACAAGAAAG-ATC 1606
Query 1387 CaaaaaaaTTTGGCTGGCTG-GAGAGATATAAGGTGGCAGTGGGTGTTGCCGAGGCGTTA 1445
| |||| | ||| | ||||| ||||| ||||| ||||| || || ||||| ||
Sbjct 1607 CGCTTGCATTTTGTTGGA-GCGAGAGGTATAAAGTGGCTGTGGGAGTAGCAGAGGCATTG 1665
Query 1446 GACTATCTACATAATACT-CATGAGCCAGAAGTGATTCACCGGGATGTGAAATCTTCTAA 1504
|||||||| ||||||||| | | || | || || ||| | ||||| || || || ||
Sbjct 1666 GACTATCTGCATAATACTGCTTC-GCAACCCGTCATCCACAGAGATGTTAAGTCATCAAA 1724
Query 1505 TGTTCTTTTGGCAGATGATTTTGAGCCACAGCTCTCAGATTTCGGA-TTCGCCAGCTTGG 1563
| || || | |||||||||||||||||||| || ||||| ||| || || || | ||
Sbjct 1725 CATACTATTATCTGATGATTTTGAGCCACAGCTTTCTGATTTTGGACTT-GCAAGGTGGG 1783
Query 1564 CTTCAAGTA-CTTCG-CAGCACGTGG-CGGGTGGGGATATTGCTGGGA-CATTTGGTTAC 1619
| || | || || || || ||| | | | | | || | || |||| | ||||| |||
Sbjct 1784 CGTCTA-TATCTACGACA-CACATAATCTGCTCTG-ATGTCGC-GGGAACTTTTGGATAC 1839
Query 1620 CTAGCACCAGAGTACTTCATGCACGGTAAAGT-AACCGACAAGATCGATGTCTATGCTTT 1678
| || ||||||||||||||| | ||||| || || || ||||| ||||| ||||| ||
Sbjct 1840 TTGGCTCCAGAGTACTTCATGTATGGTAAGGTGAAT-GATAAGATAGATGTGTATGCATT 1898
Query 1679 TGGTGTTGTAT-TGCTCGAGCTCCTATCGGGTAGAAAACCAATCT-GC-GTCG-ACCAGT 1734
|| ||||| | | |||||| | || ||||| |||||||| || | || | || | ||
Sbjct 1899 CGGCGTTGT-TCTCCTCGAGTTACTTTCGGGAAGAAAACCGAT-TAGCAG-CGGAT--GT 1953
Query 1735 CTAAAGGC-CAGGAGAGCCTTGTCTTGTGGGC-AAACCCAATTCTAGA-GAGTGGAAAGT 1791
| ||||| || ||||| || ||| ||||||| ||||| ||||||||| || ||||||||
Sbjct 1954 CCAAAGGGACAAGAGAGTCTAGTCATGTGGGCCAAACC-AATTCTAGATGA-TGGAAAGT 2011
Query 1792 -TTGCTCAGTTA 1802
|| ||||||||
Sbjct 2012 ATT-CTCAGTTA 2022
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 107579767935
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5