BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg951243
Length=3229
Score E
Sequences producing significant alignments: (Bits) Value
AT5G64220.1 | Symbols: | Calmodulin-binding transcription acti... 5105 0.0
AT5G09410.3 | Symbols: EICBP.B | ethylene induced calmodulin bi... 161 3e-38
> AT5G64220.1 | Symbols: | Calmodulin-binding transcription activator
protein with CG-1 and Ankyrin domains | chr5:25686246-25692215
FORWARD LENGTH=3517
Length=3517
Score = 5105 bits (2764), Expect = 0.0
Identities = 3080/3228 (95%), Gaps = 40/3228 (1%)
Strand=Plus/Plus
Query 4 TTTTGGGTTTATGTTCCATGGCGGATCGCGGATCTTTCGGATTTGCTCCTCGATTAGATA 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 36 TTTTGGGTTTATGTTCCATGGCGGATCGCGGATCTTTCGGATTTGCTCCTCGATTAGATA 95
Query 64 TCAAGCAGTTGCTGTCAGAAGCACAACATAGGTGGCTGAGACCTGCTGAGATTTGTGAAA 123
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 96 TCAAGCAATTGCTGTCAGAAGCACAACACAGGTGGCTGAGACCTGCTGAGATTTGTGAAA 155
Query 124 TTCTTCGGAATCACCAGAAGTTTCATATTGCTTCGGAGCCTCCCAACCGACCACCCAGTG 183
||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 156 TTCTTCGGAATCATCAGAAGTTTCATATTGCGTCAGAGCCTCCCAACCGACCACCCAGTG 215
Query 184 GTTCACTCTTTCTATTTGATAGGAAGGTGCTCAGATATTTCCGAAAAGATGGGCACAACT 243
||||||||||||| || |||||||||||||||||||||||||||||||| |||||||| |
Sbjct 216 GTTCACTCTTTCTCTTCGATAGGAAGGTGCTCAGATATTTCCGAAAAGACGGGCACAATT 275
Query 244 GGAGGAAGAAGAAAGATGGGAAAACGGTGAAAGAGGCTCACGAAAAGCTCAAGGTAGGAA 303
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 276 GGAGGAAGAAGAAAGATGGGAAAACAGTGAAAGAGGCTCACGAAAAGCTGAAGGTAGGAA 335
Query 304 GCATTGATGTGTTACATTGTTACTATGCACATGGAGAAGATAATGAGAACTTCCAGAGGC 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 336 GCATTGATGTGTTACATTGTTACTATGCACATGGAGAAGATAATGAGAACTTCCAGAGGC 395
Query 364 GGTGCTACTGGATGCTTGAACAGGATCTGATGCACATTGTTTTCGTTCACTACTTGGAGG 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 396 GGTGCTACTGGATGCTTGAACAGGATCTGATGCACATTGTTTTCGTTCACTACTTGGAGG 455
Query 424 TTAAGGGTAACCGGATGAGTACCAGTGGAACTAAAGAAAACCATTCAAATTCTTTGAGTG 483
||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 456 TTAAGGGTAACCGAATGAGTACCAGTGGAACTAAAGAAAACCATTCAAATTCTCTGAGTG 515
Query 484 GCACTGGTTCTGTGAATTTTGATTCAACAGCAACCCGATCCAGCATATTGTCACCATTAT 543
|||| |||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct 516 GCACGGGTTCTGTAAATGTTGATTCCACAGCAACCCGATCCAGCATATTGTCACCATTAT 575
Query 544 GTGAAGATGCTGATTCTGGGGATAGCCGTCAAGCAAGTTCCAGTTTGCAACAAAATCCTG 603
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 576 GTGAAGATGCTGATTCTGGGGATAGTCGTCAAGCAAGTTCCAGTTTGCAACAAAATCCTG 635
Query 604 AACCTCAAACTGTTGTTCCTCAGATAATGCATCATCAGAATGCTAACACAATGAATTCTT 663
||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||
Sbjct 636 AACCTCAAACTGTTGTTCCTCAGATTATGCATCATCAGAATGCTAGCACAATCAATTCTT 695
Query 664 ATAATACGACCTCTGTTTTGGGAAATCGAGATGGTTGGACGTCAGCTCCTGGCATTGGAA 723
| ||||| |||||||||||||| | | | | || || ||| |||| |
Sbjct 696 ACAATACAACCTCTGTTTTGGG--A---A-A----T---CG--AG---ATGG--TTGG-A 734
Query 724 TTGTTTCGCAGGTTCATGGGAACAGAGTCAAAGAAAGTAACTCCCAAAGATCAGGTGATG 783
| | || | |||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct 735 -CG--T--CA-GCTCATGGGAACAGGGTCAAAGGAAGTAACTCCCAAAGATCAGGTGATG 788
Query 784 TCCCAGCATGGGATGCTTCCTTTGAGAATTCATTGGCAAGATGCCAGAATCTACCTTATA 843
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 789 TCCCAGCATGGGATGCTTCCTTTGAGAATTCATTGGCAAGATACCAGAATCTACCTTATA 848
Query 844 ATGCTCCGTTGACTCAGACACAGCCTTCTAATTTTGGTTTGATACCCATGGAAGGGAAAA 903
|||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct 849 ATGCTCCGTTGACTCAGACACAGCCTTCTACTTTTGGTTTGATCCCCATGGAAGGGAAAA 908
Query 904 CAGAGAAAGGTTCCCTGTTAACGGCAGAGCATCTGAGAGATCCTCTTCGAAA-TCAAGTA 962
||||||||||||||||||||||| |||||||||| ||| ||||||||| ||| |||||||
Sbjct 909 CAGAGAAAGGTTCCCTGTTAACGTCAGAGCATCTTAGAAATCCTCTTC-AAAGTCAAGTA 967
Query 963 AATTGGCAGTTGATATATATTCCTGTTCAGGAAAGCGTGCCATTGCAAAAGTGGCCTATG 1022
|||||||| | | |||||||||||||||||||||||||||||| ||||| |||
Sbjct 968 AATTGGCA---G------ACTCCTGTTCAGGAAAGCGTGCCATTGCAAAAATGGCCCATG 1018
Query 1023 GATTCGCATTCTGGAATGACTGATGCTACTGATCTTGCCTTATTTGGGCAAGGAGCACAT 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1019 GATTCGCATTCTGGAATGACTGATGCTACTGATCTTGCCTTATTTGGGCAAGGAGCACAT 1078
Query 1083 GAAAATTTTGGGACATTTTCCAGTCTTCTTGGCAGTCAAAATCAGCAGCCTAGTAGTTTT 1142
|||||||||||||||||||||||||||||||| |||||| |||| ||| ||||||||||
Sbjct 1079 GAAAATTTTGGGACATTTTCCAGTCTTCTTGGTAGTCAAGATCAACAGTCTAGTAGTTTC 1138
Query 1143 CAAGCTCCTTTTACAAATAATGAAGCAGCATATATACCTAAATTAGGCCCCGAGGATCTT 1202
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1139 CAAGCTCCTTTCACAAATAATGAAGCAGCATATATACCTAAATTAGGCCCCGAGGATCTT 1198
Query 1203 ATATATGAAGCAAGTGCTAACCAAACGCTACCTCTTAGAAAAGCATTGTTaaaaaaaGAG 1262
||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||
Sbjct 1199 ATATATGAAGCAAGTGCAAATCAAACACTACCTCTTAGAAAAGCATTGTTAAAAAAAGAG 1258
Query 1263 GATAGCTTGAAAAAGGTTGACAGTTTTTCTCGGTGGGTTAGTCAAGAACTTGGGGAAATG 1322
||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||| |||
Sbjct 1259 GATAGTTTGAAAAAGGTTGACAGTTTCTCTCGGTGGGTTAGTAAAGAACTTGGGGAGATG 1318
Query 1323 GAAGACTTGCAGATGCAATCTTCATCTGGAGGTATTGCATGGACTTCTGTTGAATGTGAA 1382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1319 GAAGACTTGCAGATGCAATCTTCATCTGGAGGTATTGCATGGACTTCTGTTGAATGTGAA 1378
Query 1383 AATGCAGCAGCTGGGTCTTCCTTAAGTCCTTCTCTGTCCGAGGATCAGCGCTTCACTATG 1442
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1379 AACGCAGCAGCTGGGTCTTCCTTAAGTCCTTCTCTGTCCGAGGATCAGCGCTTCACTATG 1438
Query 1443 ATTGACTTTTGGCCCAAATGGACTCAGACAGACTCAGAAGTTGAGGTAATGGTTATTGGG 1502
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1439 ATCGACTTTTGGCCCAAATGGACTCAGACAGACTCAGAAGTTGAGGTAATGGTTATCGGG 1498
Query 1503 ACATTTCTGTTGAGTCCTCAGGAAGTAACTAGCTATAGCTGGTCATGCATGTTTGGAGAA 1562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1499 ACATTTCTGTTGAGTCCTCAGGAAGTAACTAGCTATAGCTGGTCATGCATGTTTGGAGAA 1558
Query 1563 GTGGAGGTTCCGGCTGATATTTTAGTAGATGGTGTTCTTTGTTGTCATGCTCCGCCACAT 1622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1559 GTGGAGGTTCCGGCTGATATTTTAGTAGATGGTGTTCTTTGTTGTCATGCTCCGCCACAT 1618
Query 1623 GAAGTCGGTCGAGTCCCGTTCTATATAACATGTTCTGACAGATTTTCTTGCAGTGAAGTA 1682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1619 GAAGTCGGTCGAGTCCCGTTCTATATAACATGTTCTGACAGATTTTCTTGCAGTGAAGTA 1678
Query 1683 CGAGAATTCGATTTCCTTCCTGGGTCTACCACAAAGTTAAATGCTACTGACATTTATGGT 1742
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1679 CGAGAATTCGATTTCCTTCCTGGGTCTACCAGAAAGTTAAATGCTACTGACATTTATGGT 1738
Query 1743 GCCAATACAATTGAAACGTCACTTCATGTGCGGTTTGAAAATTTGCTGGCGCTCAGATCT 1802
||||||||||||||||| ||||| ||| ||||||||||||| |||||||| ||||||| |
Sbjct 1739 GCCAATACAATTGAAACATCACTCCATTTGCGGTTTGAAAACTTGCTGGCTCTCAGATGT 1798
Query 1803 TCTGTTCAGGAACACCATGTATTTGAAAATGTTGGGGAGAAACGAAGAAAAATCAGCAAA 1862
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1799 TCTGTTCAGGAACACCATATATTTGAAAATGTTGGGGAGAAACGAAGAAAAATCAGCAAA 1858
Query 1863 ATCATGTTGCTAAAGGATGAGAAAGAGTCTCTTCTCCCCGGAACAGTTGAGAAAGATCTA 1922
|||||||||||||||||||| |||||| ||| ||||||||||||| ||||||||||||||
Sbjct 1859 ATCATGTTGCTAAAGGATGAAAAAGAGCCTCCTCTCCCCGGAACAATTGAGAAAGATCTA 1918
Query 1923 GCAGAGCTGGAAGCAAAAGATCGACTGATTAGGGAAGAGTTTGAAGATAAATTATGTCTG 1982
||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||
Sbjct 1919 ACAGAGCTGGAAGCAAAAGAGCGATTGATTAGGGAAGAGTTTGAAGATAAATTATATCTG 1978
Query 1983 TGGCTCATCCATAAGGTGACTGAAGAGGGCAAGGGTCCGAATATATTAGATGAAGATGGA 2042
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1979 TGGCTCATCCATAAGGTGACTGAAGAGGGCAAGGGTCCAAATATATTAGATGAAGATGGA 2038
Query 2043 CAGGGTGTTCTACACCTTGCTGCAGCTCTTGGGTATGATTGGGCAATAAAGCCAATTTTA 2102
||||||||||||||||| || ||||| || |||||||||||||| ||||||||||| |||
Sbjct 2039 CAGGGTGTTCTACACCTAGCCGCAGCGCTGGGGTATGATTGGGCGATAAAGCCAATCTTA 2098
Query 2103 GCTGCAGGAGTTAGCATCAACTTCCGCGATGCAAATGGGTGGTCTGCTCTTCACTGGGCT 2162
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2099 GCAGCAGGAGTTAGCATCAACTTCCGCGATGCAAATGGGTGGTCTGCTCTTCACTGGGCT 2158
Query 2163 GCATTCAGTGGCAGGGAGGATACTGTCGCTGTACTTGTCTCTCTGGGTGCTGATGCTGGA 2222
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2159 GCATTCAGTGGCAGGGAGGATACTGTCGCTGTACTTGTCTCACTGGGTGCTGATGCTGGA 2218
Query 2223 GCATTGGCGGACCCATCTCCAGAACATCCTTTGGGTAAAACAGCTGCTGACTTGGCTTAT 2282
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2219 GCATTGGCGGACCCATCTCCAGAACATCCTTTGGGGAAAACAGCTGCTGACTTGGCTTAT 2278
Query 2283 GGAAACGGACACAGGGGAATATCGGGTTTCCTTGCAGAGTCATCCCTCACTAGCTACCTT 2342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2279 GGAAACGGACACAGGGGAATATCGGGTTTCCTTGCAGAGTCATCCCTCACTAGCTACCTT 2338
Query 2343 GAAAAACTAACAGTGGACGCTAAGGAAAACAGCTCTGCTGACTCCTCTGGAGCAAAAGCT 2402
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2339 GAAAAACTAACAGTGGACGCTAAGGAAAACAGCTCCGCTGACTCCTCTGGAGCAAAAGCT 2398
Query 2403 GTTCTAACAGTAGCTGAGCGAACAGCTACTCCTATGAGTTATGGTGATGTACCAGAAACA 2462
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2399 GTTCTGACAGTAGCTGAGCGAACAGCTACTCCTATGAGTTATGGTGATGTACCAGAAACA 2458
Query 2463 CTTTCGATGAAGGATTCACTTACTGCTGTCTTTAATGCTACACAAGCAGCTGATCGTCTT 2522
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2459 CTTTCGATGAAGGATTCACTTACTGCTGTCTTAAATGCTACACAAGCAGCTGATCGTCTT 2518
Query 2523 CATCAAGTGTTCAGGATGCAGTCGTTCCAGCGGAAACAGCTCTCTGAACTTGGTGGCGAC 2582
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2519 CATCAAGTGTTCAGAATGCAGTCGTTCCAGCGGAAACAGCTCTCTGAACTTGGTGGCGAC 2578
Query 2583 AAAAAATTTGATATATCCGATGAGTTAGCTGTTTCTTTTGCAGCTGCAAAGACTAAGAAG 2642
|| ||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 2579 AACAAATTCGATATATCCGATGAGTTAGCTGTGTCTTTTGCGGCTGCAAAGACTAAGAAG 2638
Query 2643 CCAGGACACAGTAATGGTGCTGTTCATGCTGCTGCAGTTCAGATCCAGAAAAAATATCGT 2702
|||||||||||| ||||||||||||||||||||| ||||| |||||||||||||| |||
Sbjct 2639 TCAGGACACAGTAGTGGTGCTGTTCATGCTGCTGCGGTTCAAATCCAGAAAAAATACCGT 2698
Query 2703 GGTTGGAAGAAGAGAAAGGAGTTCCTTCTGATCCGACAAAGAATTGTCAAGATTCAGGCT 2762
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2699 GGTTGGAAGAAGAGAAAGGAGTTCCTTCTGATCCGACAAAGAATCGTCAAGATTCAGGCT 2758
Query 2763 CATGTGAGAGGACATCAAGTCCGAAAACAATACCGAGCCATAATTTGGTCCGTAGGATTG 2822
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2759 CATGTGAGAGGACATCAAGTCCGAAAACAATACCGAGCCATTATTTGGTCCGTAGGATTG 2818
Query 2823 CTTGAGAAAATCATCTTGCGATGGAGGCGTAAAGGTAGTGGCTTACGCGGTTTCAAACGT 2882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2819 CTTGAGAAAATCATCTTGCGATGGAGGCGTAAAGGTAGTGGCTTACGCGGTTTCAAACGT 2878
Query 2883 GATACAATCACCAAGCCAACAGAACCTGTATGTCCTGCCCCTCAAGAAGATGACTATGAT 2942
|||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 2879 GATACAATCAGCAAGCCAACAGAACCTGTATGTCCTGCCCCACAAGAAGATGATTATGAT 2938
Query 2943 TTTCTCAAGGAAGGAAGGAAACAAACCGAGGAAAGGCTTAAAAAGGCTCTAACTCGAGTG 3002
|||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||
Sbjct 2939 TTTCTCAAGGAAGGAAGGAAACAAACAGAGGAAAGGCTTCAAAAGGCTCTAACCCGAGTG 2998
Query 3003 AAGTCTATGGCTCAATATCCAGAGGCACGGGCTCAATACCGTAGACTGTTGACTGTCGTT 3062
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2999 AAGTCTATGGCTCAATATCCAGAGGCACGGGCTCAATACCGTAGACTATTGACTGTCGTT 3058
Query 3063 GAAGGCTTCCGTGAGAACGAGGCATCTTCTAGCTCAGCTTTGAAAAACAACACAGAGGAA 3122
||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||
Sbjct 3059 GAAGGCTTCCGTGAGAACGAGGCTTCTTCTAGCTCGGCATTGAAAAACAACACAGAGGAA 3118
Query 3123 GCTGCAAACTACAACGAGGAAGACGATTTAATCGACATTGATTCTCTTTTGGATGACGAC 3182
|||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 3119 GCTGCAAATTACAACGAAGAAGACGATTTAATTGACATTGATTCTCTTTTGGATGACGAC 3178
Query 3183 ACTTTCATGTCTCTTGCATTTGAATGATGATCACTGGAAG-TGAGAAA 3229
|||||||||||||||||||||||||||||||||||| | | |||||||
Sbjct 3179 ACTTTCATGTCTCTTGCATTTGAATGATGATCACTGCA-GCTGAGAAA 3225
> AT5G09410.3 | Symbols: EICBP.B | ethylene induced calmodulin
binding protein | chr5:2920827-2927420 FORWARD LENGTH=3396
Length=3396
Score = 161 bits (87), Expect = 3e-38
Identities = 143/169 (85%), Gaps = 7/169 (4%)
Strand=Plus/Plus
Query 391 TGATGCACATTGTTTTCGTTCACTACTTGGAGGTTAAGGGTAACCGGATGAGTACCAGTG 450
||||||| || ||||| || |||||||||||||||||||||||||||| |||| || |
Sbjct 713 TGATGCATATCGTTTTTGTGCACTACTTGGAGGTTAAGGGTAACCGGACCAGTAT-AG-G 770
Query 451 GAACT-AAAGAAAACCATTCAAATTCTTTGAGTGGCACTGGTTCTGTGAATTTTGATTCA 509
|| | ||||||||| ||||||||||| | | |||||| | ||| |||||| ||||||||
Sbjct 771 -AA-TGAAAGAAAACAATTCAAATTCTGTAAATGGCACAGCTTCAGTGAATATTGATTCA 828
Query 510 ACAGCAA-CCCGATCCAGCATATTGTCACCATTATGTGAAGATGCTGAT 557
||||||| ||| | | |||| ||||||| ||||||||||||||||||||
Sbjct 829 ACAGCAAGCCCAA-CTAGCACATTGTCATCATTATGTGAAGATGCTGAT 876
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 160634551486
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5