BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg951257
Length=1735
Score E
Sequences producing significant alignments: (Bits) Value
AT5G64290.1 | Symbols: DCT, DIT2.1 | dicarboxylate transport 2.... 2822 0.0
AT5G64280.1 | Symbols: DiT2.2 | dicarboxylate transporter 2.2 |... 614 1e-174
> AT5G64290.1 | Symbols: DCT, DIT2.1 | dicarboxylate transport
2.1 | chr5:25714178-25716758 REVERSE LENGTH=2125
Length=2125
Score = 2822 bits (1528), Expect = 0.0
Identities = 1672/1742 (96%), Gaps = 8/1742 (0%)
Strand=Plus/Plus
Query 1 ctctctctctctctAATCTCCGGCGATGGAGAGTTTCGCTCTTCACTCTCTCTCCACCAC 60
|||||| | | | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 92 CTCTCTATATATATAATCTCCGGCGATGGAGAGTTTCGCTCTTCACTCTCTCTCCACCAC 151
Query 61 CGCCACTTCCACCTTACTCTCCCATCATCATCAT---CATCCCTCACGTCTCTCTCTTCT 117
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 152 CGCCACTTCCACCTTACTCTCCCATCATCATCATCACCATCCCTCACGTCTCTCTCTTCT 211
Query 118 CCGTCGCACCTCCTCGAGAtctccgccttcaacaatctccctccgatctctctccgttca 177
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 212 CCGTCGTACCTCTTCGAGATCTCCGCCTTCAACAATCTCCCTCCGATCTCTCTCCGTTCA 271
Query 178 acctctctccttccctctcctcaaaccaattcctcgattctccACACGAATCGCCGCCGC 237
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 272 ACCTCTCTCCTTCCCTCTTCTCAAACCAATTCCTCGATTCTCCACACGAATCGCCGCCGC 331
Query 238 ACCGCAAGACAACGctcctcctcctcctcctcc--c-ccatctccgtctccgtctcctcA 294
|||||||||||||||||||||||||||||| || | || ||||||||||||||||||||
Sbjct 332 ACCGCAAGACAACGCTCCTCCTCCTCCTCCCCCATCTCCGTCTCCGTCTCCGTCTCCTCA 391
Query 295 AGGAGCGAAACTCATTCCTCTAATCCTCTCAATCTCCGTCGGTCTCATCCTCCGATTCGC 354
||||||||||||||| ||||| || ||||||||||||||||| || ||||||||||||||
Sbjct 392 AGGAGCGAAACTCATCCCTCTGATTCTCTCAATCTCCGTCGGCCTAATCCTCCGATTCGC 451
Query 355 TGTTCCTGTACCAGAAGGAGTCACGCCACAAGGCTGGCAATTACTCTCCATCTTCCTCTC 414
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 452 TGTTCCTGTACCAGAAGGAGTCACACCACAAGGCTGGCAATTACTCTCAATCTTCCTCTC 511
Query 415 AACAATCGCTGGTCTCGTCCTTAGTCCTCTCCCAGTCGGAGCTTGGGCTTTCATTGGCCT 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 512 AACAATCGCTGGTCTCGTCCTTAGTCCTCTCCCAGTCGGAGCTTGGGCTTTCATTGGTCT 571
Query 475 CACCGCTTCAATCGTCACCAAAACGCTTTCTTTCTCCGCCGCTTTCTCAGCTTTCACAAG 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 572 CACCGCTTCAATCGTCACCAAAACGCTTTCTTTCTCCGCCGCTTTCTCAGCTTTCACAAG 631
Query 535 CGAGGTTATCTGGTTGATCGTTATCTCTTTCTTCTTCGCTCGTGGATTCGTCAAAACAGG 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 632 CGAGGTTATCTGGTTGATCGTTATCTCTTTCTTCTTCGCTCGTGGATTCGTCAAAACAGG 691
Query 595 TCTTGGTGATAGAATCGCTACTTACTTTGTGAAATGGCTTGGGAAGAGTACTTTAGGTCT 654
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 692 TCTTGGTGATAGAATCGCTACTTACTTTGTCAAATGGCTTGGGAAGAGTACTTTAGGTCT 751
Query 655 TTCTTATGGGCTCACGCTTAGTGAGGCTTTGATTGCTCCTGCAATGCCTAGTACCACTGC 714
|||||||| |||||||||||||||||||| ||||||||||| ||||||||||| |||||
Sbjct 752 ATCTTATGGTCTCACGCTTAGTGAGGCTTTAATTGCTCCTGCGATGCCTAGTACTACTGC 811
Query 715 TAGAGCTGGTGGCATTTTCTTGCCCATCATCAAGTCTCTCTCGCTATCTGCTGGAAGTAA 774
||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||
Sbjct 812 TAGAGCTGGTGGCATTTTCTTGCCCATCATCAAGTCTCTATCGCTCTCGGCTGGAAGTAA 871
Query 775 ACCGGGTGATTCTTCTTCTAGGAAATTAGGGTCTTACTTGATCCAATCTCAATTTCAGTG 834
|||| |||||||||||| |||||| |||| ||||||||||| ||||||||||| |||||
Sbjct 872 ACCGAATGATTCTTCTTCGAGGAAACTAGGCTCTTACTTGATTCAATCTCAATTCCAGTG 931
Query 835 CGCCGGAAACTCTAGTGCTCTTTTCTTGACTGCTGCAGCTCAAAATTTGCTGTGTCTCAA 894
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 932 CGCCGGAAACTCTAGTGCGCTTTTCTTGACTGCTGCAGCTCAAAATTTGCTGTGTCTCAA 991
Query 895 GTTAGCTGAGGAGCTTGGAGTAGTGATCTCAAACCCGTGGGTTTCTTGGTTTAAGGCTGC 954
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 992 GTTAGCAGAGGAGCTTGGAGTAGTGATCTCAAACCCGTGGGTTTCTTGGTTTAAGGCTGC 1051
Query 955 TAGTCTACCTGCAATCATATCACTTCTTTGTACTCCATTTATCCTCTATAAGCTTTATCC 1014
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1052 TAGTCTACCTGCAATCATATCACTTCTTTGTACTCCACTTATCCTCTATAAGCTTTATCC 1111
Query 1015 TCCAGAAACCAAAG-ACACACCGGATGCTCCAGGTATTGCTGCAACGAAACTCAAGCAAA 1073
||||||||| |||| ||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 1112 TCCAGAAAC-AAAGGACACACCTGAGGCTCCAGGTATTGCTGCAACGAAACTCAAGCAAA 1170
Query 1074 TGGGCCCTGTCACTAAAAACGAATGGATCATGGTCAGTACAATGCTTCTTGCTGTCACTC 1133
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1171 TGGGCCCTGTCACTAAAAACGAATGGATCATGGTCGGTACAATGCTTCTTGCTGTCACTC 1230
Query 1134 TTTGGATCTGCGGAGAGACTCTGGGAATACCAAGTGTTGTAGCTGCCATGATCGGTCTCT 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1231 TTTGGATCTGCGGAGAGACTCTGGGAATACCAAGTGTTGTAGCTGCCATGATCGGTCTCT 1290
Query 1194 CCATACTTCTTCTCCTTGGTGTCCTCAATTGGGACGATTGCCTAAGCGAAAAATCGGCAT 1253
||||||||||| | || |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1291 CCATACTTCTTGTGCTAGGTGTCCTTAATTGGGACGATTGCCTAAGCGAAAAATCGGCAT 1350
Query 1254 GGGACACATTAGCATGGTTTGCTGTCTTGGTGGGAATGGCAGGACAGCTCACAAACCTCG 1313
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1351 GGGACACATTAGCTTGGTTTGCTGTCTTGGTGGGAATGGCAGGACAGCTTACAAACCTCG 1410
Query 1314 GTGTTGTAACATGGATGTCTGATTGTGTAGCCAAAGTTCTCCAATCTCTCTCCTTGGGTT 1373
|||||||||| |||||||||||||||||||| |||||||| ||||||||||||||| |||
Sbjct 1411 GTGTTGTAACGTGGATGTCTGATTGTGTAGCTAAAGTTCTACAATCTCTCTCCTTGAGTT 1470
Query 1374 GGCCTGCTGCGTTTGGACTTCTTCAAGCAGCGTACTTCTTCATTCACTACCTTTTCGCAA 1433
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1471 GGCCTGCTGCGTTTGGACTTCTTCAAGCAGCCTACTTCTTCATTCACTACCTTTTCGCAA 1530
Query 1434 GCCAAACCGGTCACGTTGGAGCGCTTTTCTCAGCTTTCCTTGCTATGCATATAGCAGCAG 1493
||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 1531 GCCAAACCGGTCATGTTGGAGCTCTCTTCTCAGCTTTCCTTGCTATGCATATAGCAGCAG 1590
Query 1494 GTGTTCCGGGCATTTTAGCTGCACTTGCTTTAGCTTACAACACCAATCTTTTTGGTGCTT 1553
||||||| || ||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1591 GTGTTCCAGGAATTCTAGCTGCACTTGCTTTAGCATACAACACCAATCTTTTTGGTGCTT 1650
Query 1554 TGACTCACTACAGTAGCGGTCAAGCCGCTGTCTACTATGGAGCGGGTTATGTTGATCTGC 1613
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1651 TGACTCATTACAGTAGCGGTCAAGCCGCTGTCTACTATGGAGCGGGTTATGTTGATCTGC 1710
Query 1614 CTGATGTATTCAAGATTGGATTCGTGATGGCGACGATTAATGCGATAATATGGGGAGTAG 1673
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1711 CTGATGTATTCAAGATTGGATTCGTGATGGCGACGATTAATGCGATAATCTGGGGAGTAG 1770
Query 1674 TTGGAACTTTCTGGTGGAAATTTTTGGGTCTCTATTAAGAGCTCCTCGGAAGAAAGTTGT 1733
|||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct 1771 TTGGGACTTTCTGGTGGAAATTTTTGGGTCTCTACTAAGAGCTCCTCAGAAGAAAGTTGT 1830
Query 1734 TC 1735
||
Sbjct 1831 TC 1832
> AT5G64280.1 | Symbols: DiT2.2 | dicarboxylate transporter 2.2
| chr5:25711069-25713473 REVERSE LENGTH=1973
Length=1973
Score = 614 bits (332), Expect = 1e-174
Identities = 1103/1464 (75%), Gaps = 98/1464 (7%)
Strand=Plus/Plus
Query 293 CAAGGAGCGAAACTCATTCCTCTAATC-CTCTCAATCTCCGTCGGTCTCATCCTCCGATT 351
||||||||||| || |||||||| | |||| |||| |||| ||||| || ||||
Sbjct 294 CAAGGAGCGAAGCTAATTCCTCT-CGCGATCTCCGTCTCAATCGGCCTCATAGTCAGATT 352
Query 352 CGCT-GTTCC-TGTACCAGAAGGAGTCACGC-CACAAGGCTGGCAATTACTCTCCATCTT 408
| | | || | ||||||| ||| || | ||||||| |||||||||||||| |||||
Sbjct 353 C-TTAATCCCAAG-ACCAGAACAAGTAAC-CTCACAAGGATGGCAATTACTCTCAATCTT 409
Query 409 CCTC-TCAACAATCGCTGGTCTCGTCCTTAGTCCTCTCCCAGTCGGAGCTTGGGCTTTCA 467
|||| || || ||| | |||||||||||| |||||||||| || || |||||||||||||
Sbjct 410 CCTCTTC-ACCATCTCAGGTCTCGTCCTTGGTCCTCTCCCTGTAGGCGCTTGGGCTTTCA 468
Query 468 TTGGCCTCACCGCTTCAATCGTCACCAAAACGCTTTCTTTCTCCGCCGCTTTCTCAGCTT 527
||||| | ||||||||||||||||||||||||||| ||||||| |||||||| | ||||
Sbjct 469 TTGGCTTAACCGCTTCAATCGTCACCAAAACGCTTCCTTTCTCAACCGCTTTCGCCGCTT 528
Query 528 TCA-CAAGCGAGGTTATCTGGTTGATCGTTATCTCTTTCTTCTTCGCTCGTGGATTCGTC 586
| | ||| ||| | || ||||| |||| ||| |||||||||||||||||||||||| ||
Sbjct 529 TTACCAA-TGAGCTCATTTGGTTAATCGCTATTTCTTTCTTCTTCGCTCGTGGATTCATC 587
Query 587 AAAACAGGTCTTGGTGATAGAATCGCTACTTACTTT-GTGAAATGGCTTGGGAAGAGTAC 645
||||| |||||||| || |||||||||||||| ||| || || ||||| ||||| || ||
Sbjct 588 AAAACTGGTCTTGGCGACAGAATCGCTACTTA-TTTCGTCAAGTGGCTGGGGAAAAGCAC 646
Query 646 T-TTAGGTCTTTCTTATGGGCTCACGCTT-AGTG--AGGCTTTGATTGCTCCTGCA--AT 699
| || ||||| |||||||| || || || ||| | || || || | | || | ||
Sbjct 647 TCTT-GGTCTCTCTTATGGTCTTGCG-TTCTGTGAAACGC-TT-ATGGGT-TTG-ATTAT 700
Query 700 GCC-TAGTACCACT-GCTAGAGCTGGTGGCATTTTCTTGCCCATCATCAAGTCTCTCTCG 757
||| | ||||| | |||||||| |||||| |||||||||| | || || ||| | | |
Sbjct 701 GCCGT-CTACCA-TGGCTAGAGCCGGTGGCGTTTTCTTGCCGGTGATTAAATCT-T-TGG 756
Query 758 CTATCT--GCTGGAAGTAAACCGGGTGATTCTTCTTCTAGGAAATTAGGG-TC-TTACTT 813
| |||| || |||||| | || || || | ||||| || ||||| ||| || || | |
Sbjct 757 CGATCTCCGCCGGAAGTTATCCCGGAGACCCATCTTCCAGAAAATT-GGGTTCTTTTC-T 814
Query 814 GATCCAATCTCAATTTCAGTGCGCCGGAAAC-TCTAGTGCTCTT-TTCTTGAC-TGCTGC 870
|| ||| ||||||| ||||| | || | | ||| |||| || | | | || | | ||
Sbjct 815 CATTCAAACTCAATTGCAGTGTTCAGG-AGCTTCTGGTGCGATTCTAC-TCACAT-CAGC 871
Query 871 AGCTCAAAATTTGCTGTGTCTCAAGTTAGC-TGAGGAGCTTGGAGTAGTGATCTCAAACC 929
|| ||||| ||||| |||||||| |||| ||| || |||| || || ||||| || |
Sbjct 872 TGCACAAAACTTGCTATGTCTCAAACTAGCAAGAGAAG-TTGGTGTTGTAATCTCGAATC 930
Query 930 CGTGGGTTTCTTGGTTT-AAGGCTGCTAGTCTACCTGCAATCATATCACTTCTTTGTACT 988
| ||| | |||||||| ||| | |||||| | ||||| | | || ||||||||||||
Sbjct 931 CATGGATCACTTGGTTTAAAGTC-GCTAGTGTTCCTGCGTTTGTGTCTCTTCTTTGTACT 989
Query 989 CCAT-TTATCCTCTATAAGCTTTATCCTCCAGAAACCAAAGACACACCGGATGCTCCAGG 1047
|| | | || |||| |||||||| ||||| || ||| ||||||| || ||||| ||
Sbjct 990 CC-TCTCATTATCTACAAGCTTTACCCTCCTGAGTTGAAACACACACCAGAAGCTCC-GG 1047
Query 1048 -TATTGCTGC-AACGAAACTC-AAGCAAAT-GGGCCCTGTCACTAAAAACGAATGGATCA 1103
| ||||| || ||| ||| || | | | || ||| |||| ||||||||||||||||
Sbjct 1048 CTGCAGCTGCTAA-GAAGCTCGAA-CGATTAGGTCCC-ATCACGAAAAACGAATGGATCA 1104
Query 1104 TGGTCAGTACAAT-GCTTCTTGCTGTCACTCTTTGGATCTGCGGAGAGACTCTGGGAATA 1162
|| || | | || |||| | | ||| |||||||| | | ||||||| | | ||||||
Sbjct 1105 TGCTCGGCGCTATGGCTT-TCACCGTCTCTCTTTGGGTTTTCGGAGAGGCAATAGGAATA 1163
Query 1163 CCAAGTGTTGTAG-CTGCCATGATCGGTCTCTCCATACTTCTTCTCCTT-GGTGTCCTCA 1220
|||||||||| | | || ||||| ||||| || | |||||| || || || ||| | |
Sbjct 1164 GCAAGTGTTGT-GTCCGCGATGATAGGTCTATCAACACTTCTGCT-GTTGGGAGTCATAA 1221
Query 1221 ATTGGGACGATTGCCTAAGCGAAAAATCGGCATGGGACACAT-T-AGCATGGTTTGCTGT 1278
| ||||||||||| || || || ||||| || |||||| | | | | | |||||||| ||
Sbjct 1222 ACTGGGACGATTGTCTCAGTGACAAATCAGCTTGGGACTC-TCTCA-CTTGGTTTGCGGT 1279
Query 1279 CTTGGTGGGAATGGCAGGACAGCTCACAAACCTCGGTGTTGTAACATGGATGTCTGATTG 1338
||| | || ||||| |||||||| |||||||||||||| || | |||||||| |||||
Sbjct 1280 TTTGATTGGTATGGCTGGACAGCTAACAAACCTCGGTGTCGTTGCTTGGATGTCGGATTG 1339
Query 1339 TGTAGCCAAAGTTCTCCAATCTCTCTCCTTGGGTTGGCCTGCTG-CGTT--TGGACTTCT 1395
||| |||||| | || |||||||||||| || |||||| || | | || | | ||||
Sbjct 1340 TGTGGCCAAACTGCTACAATCTCTCTCCCTGACTTGGCCCGC-GTCATTCAT-TA-TTCT 1396
Query 1396 TCAAGCAGCG-TACT-TCTTCATTCACTACCT-TTTCGCAAGCCAAACCGGTCACGTTGG 1452
|| || | || | |||| || || || || ||| ||||||||||||||||||| ||
Sbjct 1397 CCAGGC-TTGTTA-TCTCTTGATACATTATCTATTT-GCAAGCCAAACCGGTCACGCGGG 1453
Query 1453 AGCGCTTTTCTCAG-CTTTCCTT-GCTATGCATATAGCAGCAGGTGTTCC-GGGCATTTT 1509
||| | | | || | |||| ||| || ||||| || || || || || || ||| || |
Sbjct 1454 AGCTC-TCTATCCGCCTTT-CTTGGCGATGCAAATCGCTGCTGGCGTGCCTGGG-GTTCT 1510
Query 1510 AGCTGCAC-TTGCTTTAGCTTACAACACCAATCTTTTTGGTGCTTTGACTCACTACAGTA 1568
||| || | |||| || |||| ||||| |||||| | |||||||||| | || || |||
Sbjct 1511 AGCAGCGCTTTGC-TTGGCTTTCAACAACAATCTCTCTGGTGCTTTGGCACATTATAGTG 1569
Query 1569 GCGGTCAAGCCGCTGTCTACTATGGAGC-GGGTTATGTTGATCTGCCTGATGTATTCAAG 1627
| || | || ||| | || || ||||| ||| ||||| |||||| ||| | || ||
Sbjct 1570 GTGGACCGGCTGCTTTATATTACGGAGCTGGG-TATGTAGATCTGAGAGATATGTT-TAG 1627
Query 1628 A-TTGGATTCGTGATGGCGACGAT-TA-ATGCGATAATATGGGGA-GTAGTTGGAACTTT 1683
| | || ||||||||||| | | || | ||||| || |||||| || |||||| ||||
Sbjct 1628 AGTCGGGTTCGTGATGGC-TC-TTGTACAAGCGATCATCTGGGGAGGT-GTTGGATCTTT 1684
Query 1684 CTGGTGGAAATTTTTGGGTCTCTA 1707
||||||||||||||||||||||||
Sbjct 1685 CTGGTGGAAATTTTTGGGTCTCTA 1708
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 85792731405
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5