BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg951297 Length=1851 Score E Sequences producing significant alignments: (Bits) Value AT5G64640.1 | Symbols: | Plant invertase/pectin methylesterase... 2983 0.0 > AT5G64640.1 | Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily | chr5:25836727-25839199 FORWARD LENGTH=2048 Length=2048 Score = 2983 bits (1615), Expect = 0.0 Identities = 1777/1856 (96%), Gaps = 7/1856 (0%) Strand=Plus/Plus Query 1 AAATAtc-t-tctctccctccaatggattctccgaaactcccgtactctctctccgcctc 58 ||||||| | ||||||||||||||||||||||||| ||| ||| ||||| |||||||||| Sbjct 72 AAATATCTTCTCTCTCCCTCCAATGGATTCTCCGACACTACCGCACTCTATCTCCGCCTC 131 Query 59 ttcctccACCCCATTCGCTTCCGCCGCCGTAAAACCTCACCGGAATAAACTCCTTTCCCG 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 132 TTCCTCCACCCCATTCGCTTCCGCCGCCGTAAAACCTCACCGGAATAAACTCCTTTCCCG 191 Query 119 TAATGGCATCCTCATCATCATCGCCGTGTCCTGTATTCTCCTCCTCCTCATATCTCTCCT 178 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 192 TAATGGCATCCTCATCATCATCGCCGCGTCCTGTATTCTCCTCCTCCTCATATCTCTCCT 251 Query 179 CATCTACGCCACCGTCTCAAAATCCTCCCGCAGCCACCGTAATCCATCGCACCAAACCCC 238 |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct 252 CATCTACGCCACCGTCTCAAAATCCTCCCGCAACCACCATAATCCATCGCACCAAACCCC 311 Query 239 AACCTCCGACGATCATCCTCCGCCGGAAACACCTCCTTCTCCTCCTCCAATTGCTCAGAT 298 ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct 312 AACCTCCGACGATCATCCTCCGCCGGAAACACCTCCTTCTCCTCCACCAATCGCTCAGAT 371 Query 299 CCGTCTCGCATGTAACGCAACGCGTTTCCCAGACCATTGCGTTGCCTCGCTCTCTAAACC 358 |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 372 CCGTCTCGCATGCAACGCAACGCGTTTCCCAGATCATTGCGTTGCCTCGCTCTCTAAACC 431 Query 359 GGGTCAAGTCCCTCCGGATCCTAAACCGGTCCAAATAATCCACTCTGCAATTTCAGTCTC 418 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 432 CGGTCAAGTCCCTCCGGATCCTAAACCGGTTCAAATAATCCACTCTGCAATTTCAGTCTC 491 Query 419 CTTCGAGAATCTCAAATCCGGCCAATCAAAAATCAAATCAATCCTAGACTCCTCCGCAGG 478 || |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| Sbjct 492 CTACGAGAATCTCAAATCCGGCCAATCGAAAATCCAATCAATCCTAGACTCCTCCGCAGG 551 Query 479 GAATAAAAACCGTACGAACATCGCCACCATTTGCCTCGAGATCCTCTCTTACTCTCAACA 538 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 552 GAATCGAAACCGTACGAACATCGCCACCATTTGCCTCGAGATCCTCTCTTACTCTCAACA 611 Query 539 CCGTACCGAATCAACGGACATCGCCGTGACGAGCGGCGAAATCAAAGACGCTCGTGCTTG 598 ||||||||||||||| ||||| ||||||||||||||||| ||||||||||| ||||| || Sbjct 612 CCGTACCGAATCAACAGACATAGCCGTGACGAGCGGCGATATCAAAGACGCACGTGCGTG 671 Query 599 GATGAGCGCAGCTCTAGCTTACCAATTCGATTGCTGGTCAGGTCTCAAAACCGTCAACGA 658 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 672 GATGAGCGCAGCTCTAGCTTACCAATTCGATTGCTGGTCAGGTCTCAAAACCGTCAACGA 731 Query 659 CACGAAGCAAGTCGTCGACACGATCACGTTCTTCGAAGATCTCGTGAACCTCACCGGAAA 718 ||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct 732 CACTAAGCAAGTCGTCGACACGATTACGTTCTTCGAAGGTCTCGTGAACCTCACCGGAAA 791 Query 719 CGCGTTGAGCATGATGTTATCGTTCGATAATTTTGGAGACGACGTCGTTTCGTGGATTCG 778 ||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||| Sbjct 792 CGCGTTGAGCATGATGTTATCGTTCGACAGTTTCGGAGACGACGTCGTTTCGTGGATTCG 851 Query 779 TCCAGCGACGGAAAGAGATGGGTTTTGGGAAAAAGCTGGGCCGAGTTTGGGCTCGGGTAC 838 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct 852 TCCAGCGACGGAAAGAGACGGGTTTTGGGAGAAAGCTGGGCCGAGTTTGGGCTCGGGTAC 911 Query 839 GGGTACAGAGGCTAATTTGGGTTTTCCGTCTGGTTTAACGGAAGACGTGACGGTGTGTAA 898 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 912 GGGTACAGAGGCTAGTTTGGGTTTTCCGTCTGGTTTAACGGAAGACGTGACGGTGTGTAA 971 Query 899 AAACGGAGGGAAAGCGTGTAATTACAAAACGGTGCAAGAAGCCGTTGACGCAGCGCCGGA 958 |||||||||||||| ||||| |||||||| ||||||||||||||||| | |||||||| Sbjct 972 AAACGGAGGGAAAGATTGTAAATACAAAACAGTGCAAGAAGCCGTTGATTCCGCGCCGGA 1031 Query 959 TACTAACGGAACCGTTAAGTTTGTGATACGGATTAAAGAAGGTGTGTATGAGGAAACCGT 1018 ||| ||| |||| || |||||||||||||| |||| ||||||||||||||| |||||||| Sbjct 1032 TACAAACAGAACTGTAAAGTTTGTGATACGTATTAGAGAAGGTGTGTATGAAGAAACCGT 1091 Query 1019 TAGGGTTCCGTTTGAGAAAAAGAACGTCGTCTTCATCGGTGACGGAATGGGCAAAACGGT 1078 |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct 1092 TAGGGTTCCGTTTGAGAAAAAGAATGTCGTCTTCATCGGTGACGGAATGGGTAAAACGGT 1151 Query 1079 AATTACAGGGTCGTTGAATGTTGGACAACCAGGGATGACAACGTTT-AACTCTGCAACTG 1137 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct 1152 AATTACAGGGTCGTTGAATGTTGGACAACCAGGGATGACAACGTTTGAA-TCTGCAACTG 1210 Query 1138 TCGGAGTTCTCGGTGATGGATTTATGGCTCGTGATTTAACCATAGAGAACACAGCAGGAG 1197 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct 1211 TCGGAGTTCTCGGTGATGGATTTATGGCTCGTGATTTAACTATAGAGAACACGGCAGGAG 1270 Query 1198 CAGATGCGCACCAAGCGGTTGCGTTTAGATCAGACAGTGATTTCTCGATACTCGAAAACT 1257 ||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||| Sbjct 1271 CAGATGCGCACCAAGCGGTTGCGTTTAGATCAGACAGTGATTTTTCGGTACTTGAAAACT 1330 Query 1258 GTGAGTTTCTTGGGAATCAAGACACTGTTTATGCTCACTCTCTCCGTCAGTTCTACAAAC 1317 | |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1331 GCGAGTTTCTTGGGAACCAAGACACTCTTTATGCTCACTCTCTCCGTCAGTTCTACAAAC 1390 Query 1318 AATGTCGAATCCAAGGCAACGTAGACTTCATCTTTGGTAACTCAGCTGCCGTATTCCAAG 1377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1391 AATGTCGAATCCAAGGCAACGTAGACTTCATCTTTGGTAACTCAGCTGCCGTATTCCAAG 1450 Query 1378 ACTGTGATATCCTAATCGCTTCAAAAAATTCCAAACTCGAGCAAGGCGGTGCAAACAACG 1437 | |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct 1451 ATTGTGATATCCTAATCGCTTCAAAACACTCCAAACTCGAGCAAGGCGGTGCAAACAACG 1510 Query 1438 CGATCACAGCACACGGTAGGATTGATGCGTCGCAGTCCACGGGATTTGTGTTTTTGAACT 1497 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1511 CGATCACAGCACACGGGAGGATTGATGCGTCGCAGTCCACGGGATTTGTGTTTTTGAACT 1570 Query 1498 GTTCGATTAACGGAACAGAGGAATACATGAAGGAGTTTCAAGCTAACCCTAAAGGGCATA 1557 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1571 GTTCGATTAACGGAACAGAGGAATACATGAAGGAGTTTCAAGCTAACCCTGAAGGGCATA 1630 Query 1558 AGAACTTCTTGGGGAGACCATGGAAGGAGTTTTCGAGGACGGTTTTTGTAAACTGTAATC 1617 ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1631 AGAACTTCTTGGGAAGACCGTGGAAGGAGTTTTCGAGGACGGTTTTTGTAAACTGTAATC 1690 Query 1618 TAGAGTCTTTAATTAGTCCTGATGGATGGATGCCTTGGAGCGGGGATTTCGCATTGAAGA 1677 | |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1691 TTGAGTCTTTGATTAGTCCTGATGGATGGATGCCTTGGAACGGGGATTTCGCATTGAAGA 1750 Query 1678 CTTTGTATTACGGTGAGTACAAGAATAAGGGTCCGGGATCGGTTAGAACGAATAGGGTTC 1737 ||||||||||||||||||| ||||||| ||||||||||||||||||| ||| |||||||| Sbjct 1751 CTTTGTATTACGGTGAGTATAAGAATACGGGTCCGGGATCGGTTAGATCGAGTAGGGTTC 1810 Query 1738 CATGGAGTAGTGAGATACCAGAGAAGCATGTTGATGTTTACTCTGTGGCCAATTTTATTC 1797 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1811 CATGGAGTAGTGAGATACCAGAGAAGCATGTTGATGTTTACTCTGTTGCCAATTTTATTC 1870 Query 1798 AGGCTGATGAGTGGGCTTCCACGACTGCTTGATTTT-GTGAAGGAAA-ATTGAGGT 1851 |||||||||||||||||||||||||||||||||||| || ||||||| || ||||| Sbjct 1871 AGGCTGATGAGTGGGCTTCCACGACTGCTTGATTTTTGTAAAGGAAACAT-GAGGT 1925 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 91615994625 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5