BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg951308
Length=2624
Score E
Sequences producing significant alignments: (Bits) Value
AT5G64710.1 | Symbols: | Putative endonuclease or glycosyl hyd... 3114 0.0
AT5G09840.1 | Symbols: | Putative endonuclease or glycosyl hyd... 433 5e-120
> AT5G64710.1 | Symbols: | Putative endonuclease or glycosyl hydrolase
| chr5:25869260-25872229 FORWARD LENGTH=2771
Length=2771
Score = 3114 bits (1686), Expect = 0.0
Identities = 2336/2637 (89%), Gaps = 95/2637 (4%)
Strand=Plus/Plus
Query 7 TTCC-TGAGAAAATCATGCAATTCGCG-TCTACCAAATCACTCTTCCTCCGCCTCGCCGG 64
|||| ||||| |||||||||||||| | ||| ||||| | |||||| ||||| |||||||
Sbjct 94 TTCCTTGAGATAATCATGCAATTCG-GATCTTCCAAAACCCTCTTCTTCCGCGTCGCCGG 152
Query 65 TTTCTCTTCCACATCCGTCTTCAAGCCGCCTCGCGCGATCGCTGTTCTGGTCGCAAATTT 124
|||||||||||| |||||||||||||||| |||||||||| |||||| ||||| ||||||
Sbjct 153 TTTCTCTTCCACCTCCGTCTTCAAGCCGCGTCGCGCGATCTCTGTTCCGGTCGGAAATTT 212
Query 125 CTCTTCTTCTAGCTCGATCTCCGGC-CACTTCACTTCTTTGAGGCG-TCATCAATACGAA 182
||||||||||||||||| ||| || |||| ||||||||||| ||| || |||||||||
Sbjct 213 TTCTTCTTCTAGCTCGATTTCC-GCTCACTACACTTCTTTGAAGCGTTC-TCAATACGAG 270
Query 183 GAGGAGTCGCGGAGTGTTAGGGTTCATGTATGGTGGGATTTCGAGAACTGTCATTTGCCG 242
|| || || |||||||||||||| | ||||||||||||||| |||||||| |||||||||
Sbjct 271 GAAGATTCACGGAGTGTTAGGGTCCCTGTATGGTGGGATTTTGAGAACTGCCATTTGCCG 330
Query 243 TCGGGTGCGAATGTCTTCAAATTGGCTCAAACCATCACATCCGCCGTTAGATTCAGCGGA 302
|||||||| |||||||||||||||||||||||||||||||||||||||||| || | |||
Sbjct 331 TCGGGTGCAAATGTCTTCAAATTGGCTCAAACCATCACATCCGCCGTTAGAATCTGTGGA 390
Query 303 ATCAAAGGACCCATCACCATCACAGCCTTCGGAGACTTAATCCAGCTCTCCAGAACTAAC 362
||||||||||||||||||||||| |||| ||||||| | |||||||||||||||||||||
Sbjct 391 ATCAAAGGACCCATCACCATCACTGCCTACGGAGACATGATCCAGCTCTCCAGAACTAAC 450
Query 363 CAAGAAGCTCTCTTTGCCACTGGAATCAATCTCACTCATGTTCCTCAAGGTGGGAAGAAC 422
|||||||||||||| || ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 451 CAAGAAGCTCTCTTCGCTACTGGAATCAATCTCACCCATGTCCCTCAAGGTGGGAAGAAC 510
Query 423 AGTACGGATAGATCTTTGATTACAGATCTAATGTATTGGGTTTTACAGAATCCACCTCCT 482
|||||||||||||||||||| ||||| |||||| |||||||| |||||||||||||||
Sbjct 511 AGTACGGATAGATCTTTGATAACAGAAATAATGTGTTGGGTTTCACAGAATCCACCTCCA 570
Query 483 GCTCATATCTTCCTTATCACTAGTGACAGAGATTTCGCGAATGTGCTACATAGATTGAGG 542
|||||| ||||||||||| ||||||| || ||||||||||||||||||||||||||||||
Sbjct 571 GCTCATCTCTTCCTTATCTCTAGTGATAGCGATTTCGCGAATGTGCTACATAGATTGAGG 630
Query 543 ATGAACAATTACAACATTTTGCTCGCGGGGTACGAAG-AAGGTACGCATGGTGTATTGTG 601
|||| ||||||||||||||||||||| | ||||||| || | |||| ||||||||||||
Sbjct 631 ATGAGGAATTACAACATTTTGCTCGCGTGCTACGAAGAAACG-ACGCTTGGTGTATTGTG 689
Query 602 TAGTGCTGCTTCGATTATGTGGGATTGGGATGCTTTAGTTAGAGGGAAAAATCCAACGGG 661
||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 690 CAGTGCTGCTTCGATTATGTGGGATTGGGATGCTTTAGTTAGAGGGCAAAATCCAACTGC 749
Query 662 TAAATATTACAATCAGCCACCGGATGGTCCTTATAATTCTTGGTATGGTCACTATAGAAC 721
|||| ||| ||||||||||| |||||||||||| ||||||||||||||||||||| |||
Sbjct 750 TAAACATTTTAATCAGCCACCTGATGGTCCTTATCATTCTTGGTATGGTCACTATACAAC 809
Query 722 TCCTCTTCTTGACCCATTTGCCTCATCTTCCACCACTACCAACAAGCAAATATCTTGTAC 781
|||||||||||||||||||||| |||| | |||| | || ||||| ||||||| |||
Sbjct 810 TCCTCTTCTTGACCCATTTGCCACATC-T--ACCA--A-TAATAAGCAGATATCTTCTAC 863
Query 782 TAGTGTGAAAACCATAGAGTTGGTTGAATCGAATTCAAATGCGACGAATTCGGGTTCTTC 841
|||||| |||||| |||| | | | | | | |||||| |||||||||
Sbjct 864 TAGTGTCAAAACCGTAGA----G-T---T-G----C---T----CGAATT-GGGTTCTTC 902
Query 842 TAAGGCTTGTCTTCCTATTCCGAA-AGAAGTTGTTAAGCAGATTGGTTTGATTTTGAGTT 900
|||| || ||| |||||||||||| | ||||||||||||||||||||||||| ||||| |
Sbjct 903 TAAGTCTCGTCGTCCTATTCCGAATA-AAGTTGTTAAGCAGATTGGTTTGATATTGAGGT 961
Query 901 GGTATCCTAAGGGAGCACCCATTACAGAACTCCGTGAGCAGCTGAGAAAGAGGAAAGTAC 960
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 962 GGTATCCTAAGGGAGCAGCCATTACAGAACTCCGTGAGCAGCTGCGAAAGAGGAAAGTAC 1021
Query 961 ACTTAGATAGAGACTTTTACGGATATAAGAGTTTTTCGAGGTTTCTGTTATCTATGCCGA 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1022 TGTTAGATAGAGACTTTTACGGATATAAGAGTTTTTCGAGGTTTCTGTTATCTATGCGGA 1081
Query 1021 AGATCTTACAGGTTGTTCCAGTGGGAGATGGTATGTTTTCTATTCATGCTGTTACCCAGG 1080
| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1082 ATATCTTACAGGTTGTTCCTCTGGGAGATGGTATGTTTTCTATTCATGCTGTTACCCAGG 1141
Query 1081 GAATGAATAACAAAGCCTCATCACCGAATGTAAGTAGTGAGAATCACGAAGTTGTTAGTT 1140
||||| |||| ||||||| || || || |||||| | |||||||| | ||||||||||
Sbjct 1142 GAATGGATAATAAAGCCTTATTGCCAAAAGTAAGTTGCGAGAATCATGCAGTTGTTAGTG 1201
Query 1141 TGGACAAGATGTGTGAGGATATGAAACAGAATGATGAAA-ATGTCAAAGAGGAA--TC-T 1196
|||| ||||||||| || ||||||||||||||||| ||| |||||||||||||| || |
Sbjct 1202 TGGAAAAGATGTGTCAGAATATGAAACAGAATGAT-AAAGATGTCAAAGAGGAATCTCAT 1260
Query 1197 CAATCACAAGAGAATTCTCAAGAGTCTGTTCAGGTAAT-TAGACAGATGGATGTTAAGGC 1255
|||| |||||||| ||||||||||| |||||||||||| || | |||||||||||||||
Sbjct 1261 CAATTACAAGAGAGTTCTCAAGAGTTTGTTCAGGTAATGAAG-CTGATGGATGTTAAGGC 1319
Query 1256 AAAAGAGGAACCAGTTAAAACAACTCAGCTAGCTTTAACTGTTGTTGATGATGTTTCTCC 1315
||||||||||||||||||| ||| |||||||||| |||||| |||||||||||||||| |
Sbjct 1320 AAAAGAGGAACCAGTTAAAGCAAATCAGCTAGCTATAACTGCTGTTGATGATGTTTCTTC 1379
Query 1316 TTCCGAGGAAAAAGACGGATTTCTTAAGAAGCTAAATAGACTATGGTTTGGTTCACCTGA 1375
|| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1380 TTTCGAGGAAAAAGACGGATTTCTTAAGAAGCTAAATAGACTATTGTTTGGTTCACCTG- 1438
Query 1376 AATAGTGGAATTAGAGCATCTCGAAGAAAAGAAACATATTTCTGGAAATGGAGACGAAGG 1435
|| | ||||||||||||||||| |||||| |||||||||||| ||||||
Sbjct 1439 AA-A-TGGAATTAGAGCATCTCCAAGAAAGGAAACATATTTCCGGAAAT----------- 1485
Query 1436 GAAAGGAGTTGTTGGTGAAGAAAAAGTGGTGAATACGGATTTAGAATCTCGAATTGCATC 1495
|||||| ||||||||| |||||||||| ||| ||| |||||||||| |||||||||
Sbjct 1486 ----GGAGTTCTTGGTGAAGGAAAAGTGGTGGATAAGGACTTAGAATCTCAAATTGCATC 1541
Query 1496 TTCTACCTCTAGTGAATCTGCTGAGGAAGTTAAAGCAGACACTGAAGTTGGCAACAAGAA 1555
||||||||||||||||||||||||||| || |||| ||||| || ||| |||||| |||
Sbjct 1542 TTCTACCTCTAGTGAATCTGCTGAGGAGGTAAAAGTAGACAATGCAGTAGGCAACGGGAA 1601
Query 1556 ATCTAAGAGTCCATGGCTCTTA-A-GTCGACTTCTGAGGAGATTCACGTTTTCTTGGGGA 1613
||||||||||||| || |||| | |||||||||||| |||||||| |||||||||||||
Sbjct 1602 ATCTAAGAGTCCA-GG-GCTTACATGTCGACTTCTGAAGAGATTCAAGTTTTCTTGGGGA 1659
Query 1614 GGAAATATAGAGCTTAGCAATGCAACAGTAACTGGACCTCAAGTAGATGATGTTTTTGCT 1673
|| ||| |||||||||||||||| ||| ||| ||||||||||| ||||| ||||||| |
Sbjct 1660 AGATATACAGAGCTTAGCAATGCAGCAGCAACCGGACCTCAAGTTGATGACGTTTTTGTT 1719
Query 1674 AAAGATTCTTTTTGGAAGGATATTGAATCTTTCATTAATTCTCCAAGAGGCTTCGTC-CT 1732
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |
Sbjct 1720 AAAGATTCTTTTTGGAATGATGTTGAATCTTTCATTAATTCTCCAAGAGGCTTCGTCGC- 1778
Query 1733 TGTTTCTCACTCAAGATCAAGAGAAGCAATGGCTAAGAATCTTAAGGAAGAAGGACCTTC 1792
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1779 TGTTTCTCACTCAAGATCAAGAGAAACAATGGCTAAGAATCTTAAGGAAGAAGGACCTTC 1838
Query 1793 ATCTCTCAAACCGCTCAATGTATCAAAAATGCTTGATTTAGTATCAATGTTAATATCAGA 1852
||| |||||||||||| ||||| ||||||||||||||||| |||| ||||||||||||||
Sbjct 1839 ATCACTCAAACCGCTCGATGTACCAAAAATGCTTGATTTAATATCTATGTTAATATCAGA 1898
Query 1853 GAAGAAATGGATCCAAGAGAATCCTTCTGATGCTCTACCTTTTAGAGTAACTTGGTTCAC 1912
||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 1899 GAAGAAATGGATCCAAGAGAATCCTTCGGATGCTCTACCTTTTAGAGTAACTCGGTTCAC 1958
Query 1913 CGAGAAAAGCTCTTGTCTTAGCAACCCTC-CTGCTACGGAGGGATTGAGATCGATATTTG 1971
||| |||||||||||| ||||||||||| | | ||||| ||||||||| |||||||||
Sbjct 1959 TGAGGAAAGCTCTTGTCGTAGCAACCCTCGCACC-ACGGATGGATTGAGAGCGATATTTG 2017
Query 1972 TGAATATGTCAAAATCATTGTGTGACGAAGCAAATGGTGAGaaaaaaaTCAAGGA-CGTT 2030
||||||||||| |||| ||||||||| |||||||||||| ||||| || | | ||||
Sbjct 2018 TGAATATGTCAGAATCGCTGTGTGACGGAGCAAATGGTGATAAAAAT-TCCACCAACGTT 2076
Query 2031 GGTATGAGCCAGAAACCTAAAGAAAGATTGAGAAGCCAGGTAATTGCGGATTGTCATAAG 2090
|||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 2077 GGTATGAGCCAGAAACCTAAAGAAAGATCGAGAAGCAAGGTAATTGCGGATTGTCATAAG 2136
Query 2091 CTGATAAAGAAGATAAGAGAGGAAAATC-CTGGAGGTTATAACATGAGTAACTTCAAGAA 2149
|||||||||||||||| ||||||||| | |||||||||||| ||| | ||| ||||||||
Sbjct 2137 CTGATAAAGAAGATAACAGAGGAAAA-CGCTGGAGGTTATAGCATAACTAAATTCAAGAA 2195
Query 2150 AGACTTTTTGGTCAAATTTGGATACCGCTTAGAACATCATAACCTCGGTTATCCGAAACT 2209
|| |||||||| |||||||||||||| |||||| ||| ||| |||||| | |||||||
Sbjct 2196 AGCCTTTTTGGAGAAATTTGGATACCGTTTAGAATATCGTAAATTCGGTTTTTCGAAACT 2255
Query 2210 GCAGTCGTTGATACAAATGAT-CCCTGAGGCTAGGATTGAATCAGGATACATTGTTCCTT 2268
|||||| |||||| ||||||| ||| |||||||||||||||||||| |||||||| |||
Sbjct 2256 GCAGTCTTTGATAGAAATGATGCCC-GAGGCTAGGATTGAATCAGGGCACATTGTTACTT 2314
Query 2269 CGTCCACCCCGGTTCCATATGAGTCTGATTCATTATTCGAAGATCTTGGTCCAGTTTCCA 2328
|||| ||||||||||||| ||| |||||||||| |||||||||||| |||||||||||||
Sbjct 2315 CGTCAACCCCGGTTCCATGTGAATCTGATTCATCATTCGAAGATCTCGGTCCAGTTTCCA 2374
Query 2329 AAAAGGTTCATGAGAATGAGTCATCTGTTTCAGAGGAAGAAGAGTATAACTCAGAGACAG 2388
||||| |||||||||||||||||||||||||||||| |||||| ||| ||||||||| |
Sbjct 2375 AAAAGATTCATGAGAATGAGTCATCTGTTTCAGAGGGAGAAGATTATGACTCAGAGATGG 2434
Query 2389 ACGAAGAAGCTTCATT-AAAACAGAGCGGCGAGgaaaggaagaagaagaagaaagaagaT 2447
| ||| ||||||| || |||||||||||| | ||||||||||||||| | ||| || |
Sbjct 2435 AGGAAAAAGCTTC-TTCAAAACAGAGCGGTGGGGAAAGGAAGAAGAA-A-GAA-GA---T 2487
Query 2448 GAAACAGAGTGCGATTTACTACAAATTCTGGGTTCTTGGGACACTGATAAGAAGCAAAAG 2507
||||||||| | |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2488 GAAACAGAGAGTGATTTACTTCAAATTCTGGGTTCTTGGGACACTGATAAGAAGC----- 2542
Query 2508 AAGTCTGCAAAAACTTTTGGTGAAGATAAGCTTGTTGAAGGAATATTGTTAAGCTTGAGG 2567
|||||||||||||||||||||||||||||||||| ||||||||| | |||||||||
Sbjct 2543 ----CTGCAAAAACTTTTGGTGAAGATAAGCTTGTTGAGGGAATATTGATGAGCTTGAGG 2598
Query 2568 AAGAAACCATCAGGTGACTCTAGGATTCAAGATTGAAGAATGTTTAATTTAACCGGG 2624
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2599 AAGAAACCATCAGGTGACTCTAGGATTCAAGATTGAAGA-TGTTTAATTTAACCGGG 2654
> AT5G09840.1 | Symbols: | Putative endonuclease or glycosyl hydrolase
| chr5:3058997-3061970 FORWARD LENGTH=2805
Length=2805
Score = 433 bits (234), Expect = 5e-120
Identities = 625/804 (78%), Gaps = 66/804 (8%)
Strand=Plus/Plus
Query 252 AATGTCTTCAAATTGGCTCAAACCATCACATCCGCCGTTAGATTCAGCGGAATCAAAGGA 311
||||||| |||| | || ||| | ||||| |||| | ||| ||||||||||||||||
Sbjct 295 AATGTCTACAAAGTAGCACAATCAATCACCGCCGCTATCAGAAACAGCGGAATCAAAGGA 354
Query 312 CCCATCACCATCACAGCCTTCGGAGAC-TTAATCCAGCTCTCCAGAACTAACCAAGAAGC 370
|| ||||| |||||||||||||| ||| || | |||||| ||||| | |||||||| ||
Sbjct 355 CCAATCACAATCACAGCCTTCGGTGACGTT-TTACAGCTCCCCAGATCAAACCAAGACGC 413
Query 371 TCTCTTTGCCACTGGAATCAATCTCACTCATGTTCCTCAA-GGTGGGAAGAACAGTACGG 429
||||| || || ||||||| |||||||||||||||| || ||||| ||||||||| | |
Sbjct 414 TCTCTCCGCTACAGGAATCAGTCTCACTCATGTTCCT-AACGGTGGTAAGAACAGTGCTG 472
Query 430 ATAGATCTTTGATTACAGATCTAATGTATTGGGTTT-TACAGAATCCACCTCCTGCTCAT 488
|||||||| | || |||||||| |||| |||||||| | ||||||||||| || ||||||
Sbjct 473 ATAGATCTCTAATCACAGATCTTATGTGTTGGGTTTCT-CAGAATCCACCACCAGCTCAT 531
Query 489 ATCTTCCTTATCACTAGTGA-CA-GAGATTTCGCGAA-TGTGCTACATAGATTGAGGATG 545
| || || ||| ||||||| | ||| ||| || || |||| |||||||||||||||||
Sbjct 532 CTTTTGCTAATCTCTAGTGATAAGGAG-TTT-GC-AAGTGTGTTACATAGATTGAGGATG 588
Query 546 AACAATTACAACATTTTGCTCGCGGGGTACGAAG-A--AGGTACGCATGGTGTATTGTGT 602
|||||||||||||||||||| ||| | || || | || | | | |||||| ||||||
Sbjct 589 AACAATTACAACATTTTGCTTGCGAG-TA--AATCATCAGCT-C-C-TGGTGTTTTGTGT 642
Query 603 AGTGCTGCTTCGATTATGTGGGATTGGGATGCTTT-AGTTAGAGG-GAAAAATCCAACGG 660
||||||||||| ||||||||||||||||||||||| | ||| ||| || | || |
Sbjct 643 AGTGCTGCTTCTATTATGTGGGATTGGGATGCTTTGA-TTAAAGGAGAGTG-TGTTACTG 700
Query 661 GTAAATATTACAATCAGCCACCGGATGGTCCTTATAATTCTTGGTATGGTCACTATAGAA 720
|||| ||| |||||||| || |||||||||||||| |||||||||||||||||||| |
Sbjct 701 GTAAGCATTTTAATCAGCCTCCTGATGGTCCTTATAACTCTTGGTATGGTCACTATAGGA 760
Query 721 CTCCTCTTCTTGACCCATTTGCCTCATCTTCCACCACTACCAACAAGCAAATATCTT-GT 779
|||||||||||| |||||||| | || | | |||||||| | |||| | ||| ||
Sbjct 761 TTCCTCTTCTTGATCCATTTGC-T-AT-TGCTACCACTACTGA---GCAA-T--CTTCGT 811
Query 780 ACTAGTGTGAAAACC-ATAGAGTTGGTT-GAATC-GAATTCAAATGCGACGAATTCGGGT 836
|||||||||||| | | ||| | | || || | | || | ||| | | | | |
Sbjct 812 -CTAGTGTGAAAATCGA-AGAACTA-TCCGAGTCTG--TG-AATT-CGA--A-TGCTG-T 860
Query 837 TCTTCTAAGGCTTGTCTTCCTATTCCGAAAGAAGTTGTTAAGCAGATTGGTTTGATTTTG 896
| || || ||| | ||||||||| |||||||||||| | ||||| ||| ||| ||
Sbjct 861 TGTT--AAC-CTT--CGTCCTATTCCAAAAGAAGTTGTTGATAAGATTCGTTCGATAGTG 915
Query 897 AGTTGGTATCCTAAGGGAGCACCCATTACAGAACTCCGTGA-GCAGCTGAGAAAGAGGAA 955
|||| ||||| ||||| || ||||||||||||| |||| | ||||||| ||||| ||
Sbjct 916 AGTTTATATCCCAAGGGGGCTGCCATTACAGAACTACGTGCTG-AGCTGAGTAAGAGCAA 974
Query 956 AGTA-C-ACTTAGATAGAGACTTT-TACGGATATAAGA-GTTTTTCGAGGTTTCTGTTAT 1011
| | | || |||| ||| ||| || ||| |||||| ||||| ||| |||||| ||||
Sbjct 975 CTTGGCTA-TT-GATAAAGA-TTTCTATGGACATAAGAAGTTTT-CGAAGTTTCTTTTAT 1030
Query 1012 CTATGCC-GAAGATCTTACAGGTT 1034
| ||||| || ||||||||||||
Sbjct 1031 CCATGCCAGAT-ATCTTACAGGTT 1053
Score = 152 bits (82), Expect = 2e-35
Identities = 175/219 (80%), Gaps = 10/219 (5%)
Strand=Plus/Plus
Query 1651 CTCAAGTAGATGATGTTTTTGCTAAAGATTCTTTTTGGAAG-GATATTGAATCTTTCATT 1709
|||||||| | || | ||||| ||||| | ||||||| || ||||||||||||||||||
Sbjct 1814 CTCAAGTACAAGACATATTTGCAAAAGAGTATTTTTGG-AGTGATATTGAATCTTTCATT 1872
Query 1710 AATTCTCCAAGAGGCTTCGTCCT-T-GTTTCTCACTCAAG-ATCAAGAGAAGCAATGGCT 1766
||||||||||||||||| | | | | || |||||||| || | |||| || | ||||||
Sbjct 1873 AATTCTCCAAGAGGCTTTG-C-TATAGTATCTCACTCGAGGA-CAAGGGAGGTGATGGCT 1929
Query 1767 AAGAATCTTAAGGAAGAAGGACCTTCATCTCTCAAACCGCTCAATGTATCAAAAATGCTT 1826
|| ||| | |||| ||||| ||||| | ||||| || |||| ||| ||||| ||||||
Sbjct 1930 AAAAATGTGCAGGAGGAAGGGCCTTCGTGTCTCAGACTGCTCGATGAATCAAGCATGCTT 1989
Query 1827 GATTTAGT-ATCAATGTTAATATCAGAGAAGAAATGGAT 1864
||||||| | | || |||||||||| |||||||||||
Sbjct 1990 CATTTAGTTA-CTTTGCTAATATCAGAAAAGAAATGGAT 2027
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 130283550971
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5