BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg951363
Length=901
Score E
Sequences producing significant alignments: (Bits) Value
AT5G65205.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 1415 0.0
AT5G10050.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 584 4e-166
> AT5G65205.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr5:26050810-26052034 REVERSE LENGTH=991
Length=991
Score = 1415 bits (766), Expect = 0.0
Identities = 843/880 (96%), Gaps = 5/880 (1%)
Strand=Plus/Plus
Query 22 AATGGGAAGCAGCAGCGACGAGACGCCAGTTGTTCTCATCACAGGATGTTCTCAGGGAGG 81
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 17 AATGGGAAGCAGCAGCGACGAGACGCCAGTGGTTCTCATCACAGGATGTTCTCAGGGAGG 76
Query 82 AATCGGCCACGCGTTGGCGCGTGAGTTCTCGGCGAATGGTTGTCGAGTGGTGGCTACGAG 141
|||||| |||||||||||||||||||||||||| ||||||||||| |||||||| |||||
Sbjct 77 AATCGGTCACGCGTTGGCGCGTGAGTTCTCGGCTAATGGTTGTCGTGTGGTGGCGACGAG 136
Query 142 TCGATCGCAG-AGCACGATGACTGAATTGGAGAAAGATCCCAAGTTCTTTGTGCAAGAGC 200
|||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 137 TCGATCGCAGAAG-ACGATGACTGAATTGGAGAAAGATTCCAAGTTCTTTGTGCAAGAGC 195
Query 201 TCGATGTTCAATCGGAGCAGAGCGTGAGTAAAATTGTGTCGAAAGTTATCGACAAATTTG 260
|||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 196 TCGATGTTCAGTCTGAGCAGAGCGTGAGTAAAGTTGTGTCGAAAGTTATCGACAAATTTG 255
Query 261 GTCAGATCGATGTTTTGGTTAATAATGCCGGAGTTCAGTGTATCGGACCTTTGGCCGAGA 320
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 256 GTCAGATTGATGTTTTGGTTAATAACGCCGGAGTTCAGTGTATCGGACCTTTGGCGGAGA 315
Query 321 TTCCAATTTCAGCCATGGAAAACACCTTCAACACCAATGTGCTCGGTTCCATGAGGATGA 380
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 316 TTCCAATTTCAGCCATGGATTACACCTTCAACACCAATGTGCTCGGTTCCATGAGGATGA 375
Query 381 CTCAAGCTGTTGTACCACACATGGCGTCTAAGAAAAAGGGAAAGATTGTCAACATAGGAA 440
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 376 CTCAAGCTGTTGTACCTCACATGGCGTCTAAGAAAAAGGGAAAGATTGTGAACATAGGAA 435
Query 441 GTATTAGCATAATGGCACCAGGACCATGGGCTGGGGTTTATACTGCATCAAAAGCTGCTC 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 436 GTATTAGCATAATGGCACCAGGACCATGGGCTGGGGTTTATACTGCATCAAAAGCTGCTC 495
Query 501 TTCATGCTCTTACCGACACTTTAAGGTTGGAGCTTAAGCCATTCGGAATTGATGTAATCA 560
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 496 TTCATGCTCTTACCGACACTTTAAGGTTGGAGCTTAAGCCATTTGGGATTGATGTAATCA 555
Query 561 ACATTGTACCAGGAGGTATTCAATCAAACATAGCTAACTCAGGGATATCGAGTTTCAACA 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 556 ACATTGTACCAGGAGGTATTCAATCAAACATAGCTAACTCAGGGATATCGAGTTTCAACA 615
Query 621 ATTTACCTGAATTGAAAGTATACAAACCATTCGAGGACGCTATCCGTGAGAGAGCGTTTC 680
||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct 616 ATTTACCTGAATTGAAACTATACAAACCGTTCGAGGACGCTATCCGTGAGAGAGCGTTTC 675
Query 681 TGTCACAAAACATAAAGCCAATACCCACAGAGACATTTGCCAAAGAGACTGTTTCCGTGG 740
|||| |||||||||||||| |||||||||||||| ||||| |||||||||||||||||||
Sbjct 676 TGTCGCAAAACATAAAGCCGATACCCACAGAGACTTTTGCGAAAGAGACTGTTTCCGTGG 735
Query 741 TGCTGAAGAAAAACCCACCGGCTTGGTACTCTACAGGAAGGTTATCGACCGTCATGGCGA 800
||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||
Sbjct 736 TGCTGAAGAAAAACCCACCGGCTTGGTACTCTACAGGTAGGTTATCTACAGTCATGGCGA 795
Query 801 TCATGCACCATATGCCGATTTTCATGAAAGATTTTCTGCTT-ACCAAGAGTTTTATGAAA 859
||||||||||||| |||||||||||||||||||||||| || || |||||||||||||||
Sbjct 796 TCATGCACCATATACCGATTTTCATGAAAGATTTTCTG-TTGACTAAGAGTTTTATGAAA 854
Query 860 AAGGGAGCAAAACCTGAGTAGTAGTGTTCTTGGTTA-AAA 898
||||||| ||||||||| |||| ||||||||||||| |||
Sbjct 855 AAGGGAGTAAAACCTGAATAGTTGTGTTCTTGGTTAGAAA 894
> AT5G10050.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr5:3144200-3145730 FORWARD LENGTH=981
Length=981
Score = 584 bits (316), Expect = 4e-166
Identities = 640/795 (81%), Gaps = 28/795 (4%)
Strand=Plus/Plus
Query 36 GCGACGAGACG-CCAGTTGTTCTCATCACAGGATGTTCTCAGGGAGGAATCGGCCACGCG 94
|||| |||| | || || ||||| || || |||||||||||||||||||| || ||||||
Sbjct 65 GCGATGAGA-GTCCGGTGGTTCTAATTACGGGATGTTCTCAGGGAGGAATTGGTCACGCG 123
Query 95 TTGGCGCGTGAGTTCTCGGCGAATGGTTGTCGAGTGGTGGCTACGAGTCGATCGCAGAGC 154
|||| ||||||||| | | ||| || |||||||||||||| ||||||||||| | |||
Sbjct 124 CTGGCCCGTGAGTTCACTGAGAAGGGATGTCGAGTGGTGGCGACGAGTCGATCACGGAGT 183
Query 155 ACGATGACTGAAT-TGGAGAAAGATCCCAAGTTCTTTGTGCAA-GAGCTCGATGTTCAAT 212
|||||||| | || ||||| ||||| | | ||| || ||| || ||||| ||||| ||||
Sbjct 184 ACGATGAC-GGATCTGGAGCAAGATTCGAGGTTATTCGTG-AAGGAGCTTGATGTGCAAT 241
Query 213 CGGAGCAGAGCGTGAGTAAAATTGTGTCGAAAGTTATCGACAAATTTGGTCAGATCGATG 272
|||| |||| |||||||| || ||||| | ||||| || || || ||| ||||||| |
Sbjct 242 CGGACCAGAATGTGAGTAAGGTTTTGTCGGAGGTTATTGATAAGTTCGGTAAGATCGACG 301
Query 273 TT-TTGGTTAATAATGCCGGAGTTCAGTGTATCGGACCTTTGGCCGAGATTCCAATTTCA 331
|| || |||||||| |||||||||||||| | |||||| |||| |||| |||||||||
Sbjct 302 TTCTT-GTTAATAACGCCGGAGTTCAGTGCGTTGGACCTCTGGCGGAGACTCCAATTTCC 360
Query 332 GCCATGGAAAACACCTTCAACACCAATGTGCTCGGTTCCATGAGGATGACTCAAGCTGTT 391
|||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||
Sbjct 361 GCCATGGAAAACACATTCAACACCAATGTTTTTGGTTCCATGAGGATGACTCAAGCTGTT 420
Query 392 GTACCACACATGGCGTCTAAGAAAAAGGGAAAGATTGTCAACATAGGAAGTATTAGCA-T 450
||||||||||||| |||||||||||||||||||||||||||| | |||||||| | | |
Sbjct 421 GTACCACACATGGTGTCTAAGAAAAAGGGAAAGATTGTCAACGTTGGAAGTATCA-CTGT 479
Query 451 AATGGCACCAGGACCATGGGCTGGGGTTTATACTGC-ATCAAAAGCTGCTCTTCATGCTC 509
|||||||| || ||||||||||| || ||||| || | |||| |||||| |||||||||
Sbjct 480 TATGGCACCTGGTCCATGGGCTGGTGTCTATACAGCTACCAAA-GCTGCTATTCATGCTC 538
Query 510 TTACCGACACTTTAAGGTTGGAGCTTAAG-CCATTCGGAATTGATGTAATCAACATTGTA 568
||||||| ||| | |||||||||||| | || || || |||||||| ||||| ||||
Sbjct 539 TTACCGATACTCTGAGGTTGGAGCTTC-GTCCGTTTGGGATTGATGTCATCAATGTTGTC 597
Query 569 CCAGGAGGTATTC-AATCAAACATAGCTAACTCAGG-GATATCGAGTTTCAACAATTTAC 626
|| ||||| || || |||||||||| ||||||| | | | | ||||||||| | |
Sbjct 598 CCGGGAGGAATAAGAA-CAAACATAGCAAACTCAGCTG-TGGCAACTTTCAACAAAATGC 655
Query 627 CTGAATTGAAAGTATACAAACCAT-TCGAGGACGCTATCCGTGAGAGAGCGTTTCTGTCA 685
|||| ||||| ||||||| || | | || || |||||| | || || |||||| | |||
Sbjct 656 CTGAGCTGAAACTATACAAGCCTTAT-GAAGAAGCTATCAGAGAAAGGGCGTTTATATCA 714
Query 686 CAAAACATAAAGCCAA-TACCCACAGAGACATTTGCCAAAGAGACTGTTTCCGTGGTGCT 744
|| | || || |||| | || |||| |||||||||| ||| ||||| ||| |||||
Sbjct 715 CAGAGGATGAATCCAACT-CCTGCAGAAACATTTGCCAGAGACACTGTAGCCGCAGTGCT 773
Query 745 GAAGAAAAACCCACCGGCTTGGTACTC-TACAGGAAGGTTAT-CGACCGTCATGGC-GAT 801
|||||| || ||||| ||||||| ||| | |||| |||| || | ||| ||||||| | |
Sbjct 774 GAAGAAGAATCCACCCGCTTGGTTCTCGT-CAGGCAGGT-ATTCAACCCTCATGGCAG-T 830
Query 802 CATGCACCATATGCC 816
|||| | ||||||||
Sbjct 831 CATGTATCATATGCC 845
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 44005112772
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5