BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg951380 Length=803 Score E Sequences producing significant alignments: (Bits) Value AT5G65340.1 | Symbols: | Protein of unknown function, DUF617 |... 1179 0.0 > AT5G65340.1 | Symbols: | Protein of unknown function, DUF617 | chr5:26113398-26114489 REVERSE LENGTH=1092 Length=1092 Score = 1179 bits (638), Expect = 0.0 Identities = 752/806 (93%), Gaps = 12/806 (1%) Strand=Plus/Plus Query 5 AACTCCC--aaaaaaaCCATGT---CCTTCCCCACAAACCCTCACCGTCGCCGGCTTGCC 59 ||||||| ||||||||||||| ||||||||||||||||| |||||||||| || || Sbjct 27 AACTCCCAAAAAAAAACCATGTCCGCCTTCCCCACAAACCCTTACCGTCGCCGCCTAGCT 86 Query 60 TCAACCACCACAAGCGCAACCGCAGCCGTAGACTGCCATAAACAAGTTCGTTCATGGCGG 119 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct 87 TCAACCACCACAAGCGCAACGGTAGCCGTAGACTGCCATAAACAAGTTCGTTCATGGCGG 146 Query 120 CTCCTTCGAACCATCGTCCAACTTCTCATCCCATCTTGTTACTGCACAATCATTGATCCA 179 |||||||| ||||||| |||||||||||||||||||||||||||||||||| | |||||| Sbjct 147 CTCCTTCGCACCATCGCCCAACTTCTCATCCCATCTTGTTACTGCACAATCGTCGATCCA 206 Query 180 AATGATATTCATGAAGACAAATTATCTCACCGCCAAATCAAACCAAGAACCTCTTCCGTC 239 ||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct 207 AATGATAGTCAAGAAGACAAATTATCTCACCGCCAAATTAAACCAAGAACCTCTTCCGCC 266 Query 240 TCTTCAACCGCCATAAACTCCAGTTTTACTGGAACCATATTCGGTTTCCGCCGTGGCAAA 299 || |||||||||| |||||||| |||||| |||||||||||||||||||| ||||||||| Sbjct 267 TCCTCAACCGCCACAAACTCCACTTTTACCGGAACCATATTCGGTTTCCGTCGTGGCAAA 326 Query 300 GTAAACTTTTGCATCCAAGCAACAAACTCGAAAACACTAAACCCAATCATTGTCCTCTTA 359 |||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct 327 GTAAACTTCTGCATCCAAGCAACAAACTCCAAAACCCTAAACCCAATCATTGTCCTCTTA 386 Query 360 GAGCTTATTGTCCCTACTGAGGTATTAGCCCGCGAAATGGGAGGAGGCGTGCTAAGGATC 419 ||||| | ||||||||| ||||||||||||||||||||| |||||||||||| |||||| Sbjct 387 GAGCTCACTGTCCCTACCGAGGTATTAGCCCGCGAAATGCAAGGAGGCGTGCTCAGGATC 446 Query 420 GCTCTCGAATCAAACAATAACGAGGGATATGGTTCACATGAAGAttcttcttcttcttca 479 ||||||||||||||||||||||| ||||||| |||||||||||||||||| | |||||| Sbjct 447 GCTCTCGAATCAAACAATAACGACGGATATGATTCACATGAAGATTCTTC--C-TCTTCA 503 Query 480 cttcttACAACACCTTTATGGAACATGTATTGCAACGGTCGGAAAGTTGGATTCGCCATC 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 504 CTTCTTACAACACCTTTATGGAACATGTATTGCAACGGTCGGAAAGTTGGATTCGCCATC 563 Query 540 AAACGACAGCCTTCCAAAG-CTGAGCTCGCCGCGTTGAAGGTGCTTACCCCGGTGGCTGA 598 |||||| |||||| | ||| ||||||| || ||||||||||||||||| ||||||||||| Sbjct 564 AAACGAGAGCCTT-CGAAGTCTGAGCTAGCTGCGTTGAAGGTGCTTACTCCGGTGGCTGA 622 Query 599 AGGAGCCGGAGTTGTTAACGGAGAAGAGATAAACCGAGAGAAAAGTGATCATATGATGTA 658 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 623 AGGAGCCGGAGTTGTTAACGGAGAAGAGATAAACCGAGAGAAAAGTGATCATATGATGTA 682 Query 659 CTTAAGAGCGAGTTTCAAACGAGTTTTTGGTTCGTTTGATTCGGAATCTTTTCATCTCGT 718 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 683 CTTAAGAGCGAGTTTCAAACGAGTTTTTGGTTCGTTTGATTCGGAATCTTTCCATCTCGT 742 Query 719 TGACCCTCGCGGGATTATCGGACAAGAACTAAGTATCTTCTTTTTTAGATCGTCAAGAAA 778 |||||| || ||||||||||| |||||||||||||||||||||| ||||||||||| ||| Sbjct 743 TGACCCACGTGGGATTATCGGTCAAGAACTAAGTATCTTCTTTTCTAGATCGTCAA-AAA 801 Query 779 -ATGATCTTGAATCGTTTTGTATGTT 803 ||||||||| |||||||||| |||| Sbjct 802 GATGATCTTGGATCGTTTTGTGTGTT 827 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 39082166366 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5