BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg951412
Length=1774
Score E
Sequences producing significant alignments: (Bits) Value
AT5G65630.1 | Symbols: GTE7 | global transcription factor group... 2645 0.0
AT5G10550.1 | Symbols: GTE2 | global transcription factor group... 835 0.0
> AT5G65630.1 | Symbols: GTE7 | global transcription factor group
E7 | chr5:26225832-26228449 REVERSE LENGTH=2444
Length=2444
Score = 2645 bits (1432), Expect = 0.0
Identities = 1693/1813 (93%), Gaps = 42/1813 (2%)
Strand=Plus/Plus
Query 1 GAAATGACCTTGCGATTCGTATGGCTCCGGCTGTTTTGGGTACCTTAAACGAACCGTCGT 60
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct 173 GAAATGACCTTGCGATTCGTATGGCTCCGGCTGTTTTCGCTACCTTAAACGAACCGTCGT 232
Query 61 ACCAGGAACAATGCGGCGCCGTTTTTATGAGGAAATTTACAAACCAATCCGTCACCGAAA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 233 ACCAGGAACAATGCGGCGCCGTTTTTATGAGGAAATTTACAAACCAATCCGTCACCGAAA 292
Query 121 ACACCAATAACCTTCCTCTCGTCAACCCTAACCCTAACCCTAATTTCGACAGGAGCAATT 180
|||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||
Sbjct 293 ACACCAATAACCTTCCGCTCTTCAACCCTAACCCTAACCCTAATTTCGAAAGGAGCAATT 352
Query 181 CGAGCAAACAGTTTGATGATTCGTCGGAATTTGGGAGCTACGCTACTTTTAA-CATCGCT 239
||||||| |||| ||||| |||||||||||||| ||||| ||||||||||| | |||||
Sbjct 353 CGAGCAAGCAGTGCGATGACTCGTCGGAATTTGGAAGCTATGCTACTTTTAATC-TCGCT 411
Query 240 GGGTACACCTCAAATCAGCTCAGGGAGCTGAAGAAGCG-TTTCACCTCTGAGCTCGAGCA 298
||||||||||||| ||||||||||||||| |||||||| ||| ||||| |||||| ||||
Sbjct 412 GGGTACACCTCAAGTCAGCTCAGGGAGCTTAAGAAGCGCTTT-ACCTCAGAGCTCAAGCA 470
Query 299 GATTCGGATCCTGAGAGAACGGATCGAGTCAGGGACGTTCGAGACTCAGCAAGCTTATAC 358
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 471 GATTCGGATCCTGAGAGAACGGATCGAGTCAGGGACGTTCGAGACTCAGCAAGGTTATAC 530
Query 359 TATCCCGGAGGTACCCGCCGTTCGATCAGCTCCGTTGAATAGTTTCGCCGGTGAAAAGAA 418
|||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct 531 TATCCCAGAGGTACCCGCCGTTCGATCAGCTCCGTTGAATAACTTCACCGGTGAAAAGAA 590
Query 419 TGACCTTGGACCGAAGAAGAAGAAGCAGAAGAAAAATGTGTCAGGTCTCAAGCGAGGCAA 478
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct 591 TGACCTTGGACCGAAGAAGAAGAAACAGAAGAAAAATGTGTCAGGTCTCAAGCGAAGCAA 650
Query 479 TCAATTTGCTGCTTCGGATCCGGAGTCGGAGAAATTATTGGCTGGTATGTTGAATACTTG 538
|||||||| | | ||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 651 TCAATTTGGTCCGTCGGATCCGGAGTCGGAGAAATTATTGGCCGGTATGTTGAATACCTG 710
Query 539 TGGTCAAATCTTGGTGAAGCTGATGAAGCATAAATGGGCGTGGGTGTTCAACACTCCTGT 598
| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 711 TAGTCAGATCTTGGTGAAGCTAATGAAGCATAAATGGGCGTGGGTGTTCAACACTCCTGT 770
Query 599 TGATGTGGTTGGTTTAGGGCTTCATGATTATCATCAGGTTGTGAAGAAACCTATGGATCT 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 771 TGATGTGGTTGGTTTAGGGCTTCATGATTATCATCAGGTTGTGAAGAAACCTATGGATCT 830
Query 659 GGGTACGGTTAAGTTGAATCTTGATAAAGGGTTTTACGTTTCGCCGATTGATTTTGCTAC 718
|||||| || || ||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 831 GGGTACAGTGAAATTGAATCTTGATAAAGGATTCTACGTTTCGCCGATTGATTTTGCTAC 890
Query 719 TGATGTCAGATTGACATTCAACAATGCAATGACGTATAATCCAAAGGGTCAAGATGTGTA 778
||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct 891 TGATGTCAGATTGACATTCGACAATGCAATGACGTATAATCCAAAGGGACAAGATGTGTA 950
Query 779 TTTTATGGCTGATAAGCTTTTGGATCATTTCGATGGAATGTTCAATCCTGCTTTTAAGAA 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 951 TTTTATGGCTGATAAGCTTTTGGATCATTTCGATGGAATGTTCAATCCTGCTTTTAAGAA 1010
Query 839 GTTTGAGGCTCAGCAGCTTAAACTCACTGGTTCTTCATCTCGTCTTGAACCTGAG----- 893
|||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1011 GTTTGAGGCTCAGCAGCTTAAACTCACTGGTTCTTCATCTCGTCCTGAACCTGACTTCAA 1070
Query 894 ----G--T-CAAGCAAAGACATTGGAATCAGAATTCGCCAATGGTGGCAAATCCTAGGAA 946
| | |||||||||||| |||||||||||| ||||||||||||| |||||||||||
Sbjct 1071 ACCTGACTTCAAGCAAAGACAGTGGAATCAGAATCCGCCAATGGTGGCGAATCCTAGGAA 1130
Query 947 AGGAACCGAACAAATATCTATCGCGAAGAAGCTTGATTCAGTGAAGCCGCCACTACCTGC 1006
||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |
Sbjct 1131 AGGAACCGAACAAATATCTATTGCGAAGAAGCTTGATTCAGTGAAGCCGCCACAACCTAC 1190
Query 1007 ATTGCCTCCTCAATTAGTCGAGCCGTCGCGTGTTCAATctccttctccaccacctcctcc 1066
||||||||||||||||||||||||||| || ||||||||||||||||| || || |||||
Sbjct 1191 ATTGCCTCCTCAATTAGTCGAGCCGTCACGCGTTCAATCTCCTTCTCCTCCTCCCCCTCC 1250
Query 1067 tcc--tcctccGG--TGG--TT--G-AGCCTCAACT------TCCGCAGCTGGTTATTGA 1111
||| | | | | || || | ||||||||| ||| ||||| | |||||
Sbjct 1251 TCCGGTGATACAGCCTGAACTTCCGCAGCCTCAACCACCACCTCCACAGCTTGAAATTGA 1310
Query 1112 AGTAGAAGCACCTCCTGATGTGAGTGACGTGACAAAAGGAAGGAAGGGGAAGTTGCCGAA 1171
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct 1311 AGTAGAAGCACCTCCTGATGTGAGTGAAGTGTCAAAAGGAAGGAAGGGGAAGTTGCCGAA 1370
Query 1172 GCCTAAGGCTAAGGATCCAAATAAGAGGTTGATGACAATGGAAGAGAAGTCAAAGCTTGG 1231
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1371 GCCTAAGGCTAAGGATCCAAATAAGAGGTTGATGACGATGGAAGAGAAGTCAAAGCTTGG 1430
Query 1232 TATGAATCTACAAGACTTACCTCCTGAGAAGCTTGGACAGTTGGTTCAGATTCTCAGGAA 1291
|||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||
Sbjct 1431 TATGAATCTACAAGACTTGCCTCCTGAGAAGCTTGGTCAGTTGCTTCAGATTCTCAGGAA 1490
Query 1292 GAGAAACGGACATTTAGCTCAAGATGGTGACGAAATTGAGCTAGATATAGAAGCTGTCGA 1351
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 1491 GAGAAACGGACATTTAGCTCAAGATGGGGACGAAATTGAGCTGGATATAGAAGCTGTCGA 1550
Query 1352 CAACGAGACTCTATGGGAGCTTGATCGTTTTGTGACGAATTACAAGAAGATGGCTAGCAA 1411
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1551 CAATGAGACTCTATGGGAGCTTGATCGTTTTGTGACGAACTACAAGAAGATGGCTAGCAA 1610
Query 1412 AATCAAGCGCCAAGGGTTTATCAGGAACGTATCAACTCCACCTAGGAACATGACTTCGGT 1471
|||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct 1611 AATCAAGCGCCAAGGGTTTATCAGGAACGTGTCAACTCCACCTAGGAACATGGCTTCGGT 1670
Query 1472 AGCAGAAATGGGTAGTGCGGAGAAGAGAACAAGGAGAGGAGATGCAGGGGAAGAGGATGT 1531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1671 AGCAGAAATGGGTAGTGCGGAGAAGAGAACAAGGAGAGGAGATGCAGGGGAAGAGGATGT 1730
Query 1532 AGACATTGGAGAAGACATACCAATCGAAGATTACCCATCTGTAGAGATCGAAAGAGATGG 1591
||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1731 TGACATTGGAGAGGACATACCAATCGAAGATTATCCATCTGTAGAGATCGAAAGAGATGG 1790
Query 1592 TACTGCAGTTGCAG--G-T---AGT-G-GGT-CTAGTTCTTCAGGCAGTTCCAGTTCTAG 1642
|||||||||||||| | | ||| | ||| ||||||||||||||||||||||||||||
Sbjct 1791 TACTGCAGTTGCAGCTGCTGCTAGTAGTGGTTCTAGTTCTTCAGGCAGTTCCAGTTCTAG 1850
Query 1643 TGGTGGTAGTTCCTCGTCTAGTGATTCAGGGTCAGGTGGGAGTTCATCAGGTAGTGATTC 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 TGGTGGTAGTTCCTCGTCTAGTGATTCAGGGTCAGGTGGGAGTTCATCAGGTAGTGATTC 1910
Query 1703 TGATGCAGATAGTGTTCAATCGCCATTTGTGGAAGCAAAAGAAGCTCAATGATAGAATCA 1762
||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 1911 TGATGCAGATAGTGTTCAATCGCCATTTGTGGAAGCAAAAGAAGCCCAATGTTAAAATCA 1970
Query 1763 TTTGGTGA-TTTA 1774
||||| || ||||
Sbjct 1971 TTTGG-GAATTTA 1982
> AT5G10550.1 | Symbols: GTE2 | global transcription factor group
E2 | chr5:3332855-3335232 REVERSE LENGTH=2037
Length=2037
Score = 835 bits (452), Expect = 0.0
Identities = 1005/1262 (80%), Gaps = 77/1262 (6%)
Strand=Plus/Plus
Query 523 GTATGTTGAATACTTGTGGTCAAATCTTGGTGAAGCTGATGAAGCATAAATGGGCGTGGG 582
||||| ||| || |||||||| |||||||||||||||||||||||||||||| | ||||
Sbjct 743 GTATGATGACGACATGTGGTCAGATCTTGGTGAAGCTGATGAAGCATAAATGGTCATGGG 802
Query 583 TGTTC--AACACTCCTGTTGATGTGGTTGGTTTAGGGCTTCATGATTATCATCAGG-TTG 639
| || || | ||||||||||||||| ||||||||||||||||| ||||||| || |||
Sbjct 803 TCTTTTTAA-A-TCCTGTTGATGTGGTAGGTTTAGGGCTTCATGACTATCATC-GGATTG 859
Query 640 TGAAGAAACCTATGGATCTGGGTACGGTTAAGTTGAATCTTGATAAAGGGTT-T-TACGT 697
|| | || |||||||||||||||||||| ||| ||||||| || ||||| || | || |
Sbjct 860 TGGACAAGCCTATGGATCTGGGTACGGTGAAGATGAATCTGGAAAAAGGTTTATATA-GA 918
Query 698 TTCGCCGATTGATTTTGCTACTGATGTCAGATTGACATTCAACAATGCAATGACGTATAA 757
| ||||||||||||| ||| ||||||| || ||||| |||| |||||| ||| |||||||
Sbjct 919 T-CGCCGATTGATTTCGCTTCTGATGTTAGGTTGACTTTCACCAATGCGATGTCGTATAA 977
Query 758 TCCAAAGGGTCAAGATGTGTATTTTATGGCTGATAAGCTTTTG-GATCA-TTTCGATGGA 815
|||||||||||||||||| ||||| |||||||| |||||| || | ||| ||| || |
Sbjct 978 TCCAAAGGGTCAAGATGTTTATTTGATGGCTGAGAAGCTTCTGAG-TCAATTT-GACGTT 1035
Query 816 ATG-TTCAATCCTGCTTTTAAGAAGTTT-GAGGCTCA-GCAGCTTAAACTCACTGGT-TC 871
|| ||||| ||| | || |||| | || |||||||| | || | ||| | | ||| ||
Sbjct 1036 -TGGTTCAACCCTACATTGAAGA-GATTCGAGGCTCAAG-AGGTGAAAGTTA-TGGGATC 1091
Query 872 TTCATCTCGTCTTGAACCTGAGG-TCAAGCAAAGACAT-TGGAATCAGAATTCGCCAATG 929
|| ||||||| || |||||||| | || |||||| | |||||||||||| ||||
Sbjct 1092 ATCGTCTCGTCCTGGACCTGAGGAT-AATCAAAGAG-TGTGGAATCAGAAT-----AATG 1144
Query 930 GTGGC--A-AATCCTAGGAAAGGAACC-GAACAAATATCTATCGCGAAGAAGCTTGATTC 985
|||| | ||| | ||||||||| || ||||| || ||||| || || ||||| |||||
Sbjct 1145 -TGGCGGAGAATGCAAGGAAAGGA-CCTGAACAGATTTCTATAGCTAAAAAGCTAGATTC 1202
Query 986 AGTGAAGCCGCCACTACCTGCATTGCCTCCTCA---ATTAGTCGAGCCGTCGCGTGTTCA 1042
||||||||||| ||||||| |||||||||||| | || | ||| | |||| |
Sbjct 1203 AGTGAAGCCGCTACTACCTACATTGCCTCCTCCTCCAGTAATTGAGATAACACGTGACCC 1262
Query 1043 ATctccttctccaccacc--tcct-cctcctcctccGGTGGTTGAGCCTCAACTTCCGCA 1099
||||||| |||| |||| | | || || || || | | || | || || ||
Sbjct 1263 ATCTCCTCCTCCTTCACCGGTTCAGCCACCACCACCACCA-TC-A-CCAC--CTCCC-CA 1316
Query 1100 GCTGGTTATTGAAGTAGAAGCACCTCCTGATGTGAGTGACGTGACAAAAGG-AAGGAAGG 1158
|| ||||| |||| |||||| | | ||| ||| |||| || | |||| |||||| |
Sbjct 1317 GCCGGTTAACCAAGTGGAAGCATCACTTGAAGTGCGTGAAACGA-ATAAGGGAAGGAAAG 1375
Query 1159 GGAAGTTGCCGAAGCCTAAGGCTAAGGATCCAAATAAGAGGTTGATGACAATGGAAGAGA 1218
||||||| ||||| || ||||||||||||||||| ||| || ||||||||||| || |
Sbjct 1376 GGAAGTTACCGAAACCGAAGGCTAAGGATCCAAACAAGCGGGAAATGACAATGGATGAAA 1435
Query 1219 AGTCAAAGCTTGGTATGAATCTACAAGACTTACCTCCTGAGAAGCTTGGACAGTTGGTTC 1278
|| ||||||||| ||||||||||||| || |||||||||||||||||||||||| |||
Sbjct 1436 AGGGAAAGCTTGGCGTGAATCTACAAGAATTGCCTCCTGAGAAGCTTGGACAGTTGATTC 1495
Query 1279 AGATTCTCAGGAAGAG-A-AACGGACATTTAGC-TCAAGATGGTGACGAAATTGAGCTAG 1335
||||||| |||||||| | || | | |||| || |||||| ||||||||||| ||| | |
Sbjct 1496 AGATTCTTAGGAAGAGGACAA-G-AGATTT-GCCTCAAGACGGTGACGAAATAGAGTTGG 1552
Query 1336 ATATAGAAGCTGTCGACAACGAGACTCTATGGGAGCTTGATCGTTTTGTGACGAATTACA 1395
|||| |||||| | || || |||||| | |||||||||||||||||||| || || ||||
Sbjct 1553 ATATTGAAGCTTTAGATAATGAGACTTTGTGGGAGCTTGATCGTTTTGTTACCAACTACA 1612
Query 1396 AGAA-GATGGCTAGCAAAATCAAGCGCCAAGGGTTTATC-AGGAACGTATCAACTCCACC 1453
||| |||||| ||||| |||||||| |||||||||||| || || || |||||||||||
Sbjct 1613 -GAAAGATGGCAAGCAAGATCAAGCGACAAGGGTTTATCCAG-AATGTGTCAACTCCACC 1670
Query 1454 TAGGAACATGACTTCGGT-AGCAGAAATGGGTAGTGCGGAGAAGAGAACAAGGAGAGGAG 1512
|| |||||| || |||| | |||||||||| ||||| ||||||||| |||| |||||
Sbjct 1671 AAGAAACATGCCTCCGGTGA-CAGAAATGGGAAGTGCTGAGAAGAGAGGGAGGAAAGGAG 1729
Query 1513 ---ATGCAGGGGAAGAGGATGTAGACATTGGAGAAGACATACCAATCGAAGATTACCCAT 1569
| ||||| |||||||||||||||||||||||||| |||||| | || ||||| ||||
Sbjct 1730 GGGAAGCAGGAGAAGAGGATGTAGACATTGGAGAAGATATACCAGTTGAGGATTATCCAT 1789
Query 1570 CTGTAGAGATCGAAAGAGATGGTACTGCAGTTGCAGGTAGTGG-G--TCTAGTTCTTCAG 1626
| || ||||| ||||| |||||||| || | || | |||||| | ||||||||||| |
Sbjct 1790 CAGTGGAGATTGAAAGGGATGGTACAGCTGCCGCTGCTAGTGGTGGCTCTAGTTCTTCTG 1849
Query 1627 GCAG-TTCCAGTTCTAGTGGTGGTAGTTCCTCGTCTAGTGATTCAGGGTCAGGTGGGAGT 1685
|||| ||| ||||| ||||| ||||| || ||||||||||||| |||||| | |||
Sbjct 1850 GCAGCTTC-AGTTCGAGTGGC---AGTTCTTCTTCTAGTGATTCAGAGTCAGG-G--AGT 1902
Query 1686 TCATCAGGTAGTGATTCTGATGCAGATAGTGTTCAATCGCCATTTGTGGAAGCAAAAGAA 1745
|||||||| |||||||| ||||| |||||||| || || |||||||||||||||||||||
Sbjct 1903 TCATCAGGAAGTGATTCGGATGCGGATAGTGTGCAGTCTCCATTTGTGGAAGCAAAAGAA 1962
Query 1746 GC 1747
||
Sbjct 1963 GC 1964
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 87750552660
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5