BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg951665 Length=527 Score E Sequences producing significant alignments: (Bits) Value AT1G80340.1 | Symbols: GA4H, ATGA3OX2, GA3OX2 | gibberellin 3-o... 760 0.0 > AT1G80340.1 | Symbols: GA4H, ATGA3OX2, GA3OX2 | gibberellin 3-oxidase 2 | chr1:30200693-30202200 REVERSE LENGTH=1083 Length=1083 Score = 760 bits (411), Expect = 0.0 Identities = 461/486 (95%), Gaps = 0/486 (0%) Strand=Plus/Plus Query 6 ACACAAGCCTTTTAGCATGAGTTCAACGTTGAGCGATGTGTTTAGATCGCATCCCATTCA 65 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 22 ACATAAGCCTTTTAGCATGAGTTCAACGTTGAGCGATGTGTTTAGATCGCATCCCATTCA 81 Query 66 CATCCCACTCTCAAACCTACCCGACTTCAAAGCCCTCCCAGATTCTTACACATGGACCCC 125 ||||||||||||||||| ||| ||||||||| | ||||| ||||||||||| ||||| || Sbjct 82 CATCCCACTCTCAAACCCACCTGACTTCAAATCTCTCCCGGATTCTTACACGTGGACTCC 141 Query 126 CAAAGATGATCTCCTCTTCTCTGCCTCCGCCTCCGACGAAACCCTGCCGCTCATCGACCT 185 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 142 TAAAGATGATCTCCTCTTCTCCGCCTCCGCCTCCGACGAAACCCTGCCGCTCATCGACCT 201 Query 186 CTCCGATCCCCACGTGACCACTCTTGTGGGCCATGCTTGTACCACGTGGGGAGCGTTACA 245 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct 202 CTCCGATATCCACGTGGCCACTCTTGTGGGCCATGCTTGTACCACGTGGGGAGCGTTCCA 261 Query 246 GATCAGCAACCACGGCGTACCCTCGCGACTTCTCGACGACATTGAGTTCCTCACCGGAAG 305 ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 262 GATCACCAACCACGGCGTCCCCTCGCGACTTCTCGACGACATTGAGTTCCTCACCGGAAG 321 Query 306 TCTTTTCCGGCTTAACGTGCAGCGGAAGCTCAAGGCGGCTCGGTCAGAGAATGGCGTCTC 365 ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 322 TCTTTTCCGGCTTCCCGTACAGCGGAAGCTCAAGGCGGCTCGGTCAGAGAATGGCGTCTC 381 Query 366 CGGCTACGGCGTGGCTCGTATTGCTTCTTTCTTTAATAAGAAAATGTGGTCCGAAGGTTT 425 |||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct 382 CGGCTACGGCGTAGCTCGTATTGCTTCGTTCTTTAATAAGAAGATGTGGTCCGAAGGTTT 441 Query 426 CACCGTTATTGGCTCTCCTCTCCAAGATTTCCGTAAACTCTGGCCCAGCCATCACCTCAA 485 |||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||| Sbjct 442 CACCGTTATTGGCTCTCCCCTCCACGATTTCCGTAAACTCTGGCCCAGCCACCACCTCAA 501 Query 486 ATACTG 491 |||||| Sbjct 502 ATACTG 507 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 25217541794 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5