BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg951681 Length=930 Score E Sequences producing significant alignments: (Bits) Value AT3G09570.1 | Symbols: | Lung seven transmembrane receptor fam... 745 0.0 > AT3G09570.1 | Symbols: | Lung seven transmembrane receptor family protein | chr3:2940446-2942109 FORWARD LENGTH=1664 Length=1664 Score = 745 bits (403), Expect = 0.0 Identities = 429/442 (97%), Gaps = 0/442 (0%) Strand=Plus/Plus Query 487 GAGACTGGACCTTTTATTAAAGACTGGTTTACTTGGAATCAGATATTCTTGCTTGTAGAT 546 ||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||| Sbjct 976 GAGACTGGACCTTTTATCAAAGATTGGGTTACTTGGAATCAGATATTCTTGCTTGTAGAT 1035 Query 547 ATAGTTTGTTGTTGTGCAATCTTATTTCCTATTGTTTGGTCGATTCGTTCGCTAAGAGAG 606 |||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||||| Sbjct 1036 ATAGTTTGCTGTTGTGCGATCTTATTCCCTATTGTTTGGTCGATACGTTCGCTAAGAGAG 1095 Query 607 ACTTCAAAAACCGATGGGAAAGCGGCTAGGAACTTGGCGAAATTGACTCTGTTTAGACAA 666 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1096 ACTTCGAAAACCGATGGGAAAGCGGCTAGGAACTTGGCGAAATTGACTCTGTTTAGACAA 1155 Query 667 TTCTACATTGTTGTCATCGGGTATTTGTACTTTACGAGGATTGTAGTGTTTGCGCTGAAG 726 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1156 TTCTACATTGTTGTCATCGGGTATTTGTACTTTACGAGGATTGTAGTGTTTGCGCTGAAG 1215 Query 727 ACAATCGCAGCTTATAAGTATCGGTGGGTGAGCAATGCAGCTGAGGAGATTGCAAGTCTG 786 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1216 ACAATCGCAGCTTATAAGTATCGGTGGGTGAGCAATGCAGCTGAGGAGATTGCAAGTCTG 1275 Query 787 GCGTTTTACATGTTGATGTTCTATATGTTCAGGCCGGTCGAGAAGAATGAGTATTTCGTT 846 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1276 GCGTTTTACATGTTGATGTTCTATATGTTCAGGCCTGTCGAGAAGAATGAGTATTTCGTT 1335 Query 847 TTAGATGAAGAAGAAGAAGAAGCCGCAGAGCTGGCCTTGAAGGAGGATGATTTTGAACTC 906 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1336 ATAGATGAAGAAGAAGAAGAAGCCGCCGAGCTGGCCTTGAAGGAGGATGATTTTGAACTC 1395 Query 907 TGAAACAGATCAAGGACTTTCA 928 |||| ||||||||||| ||||| Sbjct 1396 TGAAGCAGATCAAGGAATTTCA 1417 Score = 721 bits (390), Expect = 0.0 Identities = 457/489 (93%), Gaps = 5/489 (1%) Strand=Plus/Plus Query 1 CTCTACTGTTACGGCATGAAAATGACGAGACTACCCCTCTTCGTCGTCCTCCTACTCTTC 60 |||||| |||||||| ||| |||||||||||||||||||||||||||||||| |||||| Sbjct 58 CTCTACAGTTACGGCGCGAATATGACGAGACTACCCCTCTTCGTCGTCCTCCTCCTCTTC 117 Query 61 ACCGCAAGTTTCATCACTC-CTACGGCGGCGGAGATCAAGTCTCTCACAATTTCCGACGA 119 ||||||||| |||||||| | ||||||||||||||||| ||||||||||| |||||||| Sbjct 118 TCCGCAAGTTGCATCACTCGC-ACGGCGGCGGAGATCAAATCTCTCACAATCTCCGACGA 176 Query 120 TTCTAGGCCGATGATTCTCTTCGAAAAGTTCGGATTCACTCAGTCCGGTCATGTTAGCGT 179 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 177 TTCTAGGCCGATGATTCTCTTCGAAAAGTTCGGATTCACTCAGTCCGGCCATGTTAGCGT 236 Query 180 CTCTGTTTCCTCTGTATCAGTAGTATCTTCTTCGTCTGTTCCGATCCCAGATCCGTCGAG 239 |||| ||||||||||| ||||||||||||||||||||| ||||||||| ||||| ||||| Sbjct 237 CTCTATTTCCTCTGTAGCAGTAGTATCTTCTTCGTCTGATCCGATCCCGGATCCATCGAG 296 Query 240 GCTAGGGTTCTTCCTTATGTCCGAGGAATCGCTTCTCCAGGTAGTCTTAGAGATCGAGCA 299 | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 297 GTTAGGGTTCTTCCTTATGTCAGAGGAATCGCTTCTCCAGGTAGTCTTAGAGATCGAGCA 356 Query 300 AAAGCCTAACTTCTGTGTACTCGATTCCAATTACGTCCTCCATCTCTTCACATTAAAAGA 359 ||| || ||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 357 AAACCCCAACTTCTGTGTACTCGATTCCAATTACGTCCTCCATCTCTTCACATTTCACGA 416 Query 360 TCTCTCTTCTCCTCCTGGTTCCCAAATACGAGCACTTGTACCCGGTGATTTCTCCGAACG 419 ||||||| |||| ||||||||| ||||||||||||||||| |||||||| |||||||||| Sbjct 417 TCTCTCTCCTCCCCCTGGTTCC-AAATACGAGCACTTGTATCCGGTGATGTCTCCGAACG 475 Query 420 AATACTCTCTCTTCTTCGTGAATTGCGTTAC-GGAAACCAAAATTTCGATGAAGGTTCGA 478 |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct 476 AATACTCTCTCTTCTTCGTGAATTGCGT-ACCGGAAACCAAAATTTCGATGAAGGTTCGA 534 Query 479 CCGGAGATG 487 |||||||| Sbjct 535 ACGGAGATG 543 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 45461903035 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5