BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg951712
Length=1467
Score E
Sequences producing significant alignments: (Bits) Value
AT5G43360.1 | Symbols: PHT3, ATPT4, PHT1;3 | phosphate transpor... 1637 0.0
AT5G43350.1 | Symbols: ATPT1, PHT1;1 | phosphate transporter 1;... 1277 0.0
AT5G43370.1 | Symbols: APT1, PHT2, PHT1;2 | phosphate transport... 1216 0.0
> AT5G43360.1 | Symbols: PHT3, ATPT4, PHT1;3 | phosphate transporter
1;3 | chr5:17409524-17411214 FORWARD LENGTH=1566
Length=1566
Score = 1637 bits (886), Expect = 0.0
Identities = 1029/1096 (94%), Gaps = 18/1096 (2%)
Strand=Plus/Plus
Query 366 GAAGACTCGTGGGGCTTTCATCGCGGCAGTGTTCGCTATGCAAGGTGTAGGTATCTTGGC 425
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 474 GAAGACTCGTGGGGCTTTCATCGCGGCAGTGTTCGCCATGCAAGGTGTAGGTATCTTGGC 533
Query 426 GGGAGGTTTTGTGGCACTCGCAGTGTCTTCTATATTCGACAAAAAGTTCCCATCGCCGAC 485
|||||||||||||||||| ||||| ||||| ||||| |||||||||||||||||||||||
Sbjct 534 GGGAGGTTTTGTGGCACTTGCAGTTTCTTCCATATTTGACAAAAAGTTCCCATCGCCGAC 593
Query 486 GTATGCCCAAGACAGGATTCTCTCAACGCCTCCTCAAGCTGATTACATTTGGCGAATCAT 545
||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct 594 GTATGAGCAAGACAGGTTTCTATCAACGCCTCCTCAAGCTGATTACATTTGGCGAATCAT 653
Query 546 TGTCATGTTTGGCGCTTTACCCGCGGCTTTGACCTACTACTGGCGTATGAAGATGCCTGA 605
||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||
Sbjct 654 CGTCATGTTTGGTGCTTTACCCGCAGCTTTGACTTACTATTGGCGTATGAAGATGCCTGA 713
Query 606 AACTGCCCGCTACACTGCTTTAGTTGCCAAGAACATTAAGA-AAGCCACA-CAAGACATG 663
||| ||||| ||||| |||||||||||||||||||| || | |||||||| | |||||||
Sbjct 714 AACAGCCCGTTACACCGCTTTAGTTGCCAAGAACATCAA-ACAAGCCACAGC-AGACATG 771
Query 664 TCCAAGGTCTTACAAGTGGATCTTGAGGTTGAAG-AA------AGG--G-CG--GAGGAC 711
||||||||||||||| ||||| ||| |||| | || ||| | || |||||
Sbjct 772 TCCAAGGTCTTACAAACAGATCTCGAGCTTGAGGAAAGGGTGGAGGATGACGTCAAGGAC 831
Query 712 CCCAAACTAAACTATGGCTTGTTCTCCAAGGAATTCCTTAGACGCCATGGGCTTCATCTC 771
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 832 CCCAAAAAAAACTATGGCTTGTTCTCCAAGGAATTCCTTAGACGCCATGGGCTTCATCTC 891
Query 772 CTTGGGACTACCTCCACTTGGTTTTTGCTTGACATCGCCTTCTACAGCCAAAACTTGTTC 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 892 CTTGGGACTACCTCCACTTGGTTTTTGCTTGACATCGCCTTCTACAGCCAAAACTTGTTC 951
Query 832 CAAAAGGATATTTTCTCGGCCATTGGATGGATCCCAAAGGCAGCCACTATGAACGCCATC 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 952 CAAAAGGATATTTTCTCGGCCATTGGATGGATCCCAAAGGCAGCCACTATGAACGCCATC 1011
Query 892 CATGAGGTTTTCAAGATTGCTAAGGCTCAGACTCTCATTGCCCTTTGCAGTACAGTCCCA 951
|||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct 1012 CATGAGGTTTTCAAGATTGCTAGGGCTCAGACTCTCATTGCCCTCTGCAGTACAGTCCCA 1071
Query 952 GGTTACTGGTTCACGGTTGCTTTTATTGATATCATTGGAAGGTTTGCGATCCAACTAATG 1011
|||||||||||||| || || |||||||||||||||||||||||||||||||||||||||
Sbjct 1072 GGTTACTGGTTCACAGTAGCCTTTATTGATATCATTGGAAGGTTTGCGATCCAACTAATG 1131
Query 1012 GGATTCTTTT-TCATGACGGTCTTTATGTTCGCCATTGCCTTCCCATACAACCACTGGAT 1070
||||| ||| | ||||| || |||||||| || ||||||||||||||||||||||||||
Sbjct 1132 GGATT-TTTCATGATGACCGTTTTTATGTTTGCTATTGCCTTCCCATACAACCACTGGAT 1190
Query 1071 TTTACCAGATAATCGTATCGGATTCGTGGTTATGTACTCACTCACATTTTTCTTCGCCAA 1130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1191 TTTACCAGATAATCGTATCGGATTCGTGGTTATGTACTCACTCACATTTTTCTTCGCCAA 1250
Query 1131 CTTTGGACCCAATGCAACCACTTTCATTGTCCCAGCTGAAATCTTTCCGGCCAGGCTTAG 1190
|||||||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||
Sbjct 1251 CTTTGGACCCAATGCAACTACTTTCATTGTCCCAGCTGAAATCTTTCCAGCAAGGCTAAG 1310
Query 1191 ATCTACGTGCCATGGAATATCAGCCGCGACAGGTAAGGCTGGAGCTATCGTTGGAGCCTT 1250
|||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||
Sbjct 1311 GTCTACGTGCCATGGAATATCAGCCGCAACTGGTAAGGCTGGAGCCATCGTTGGAGCCTT 1370
Query 1251 CGGGTTCTTATATGCTGCTCAACCACAGGATAAGACCAAGACAGACGCAGGATACCCACC 1310
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1371 CGGGTTCCTATATGCTGCTCAACCACAGGATAAGACCAAGACAGACGCAGGATACCCACC 1430
Query 1311 GGGCATCGGAGTCAAGAACTCACTGATCATGCTTGGTGTCATTAACTTTGTTGGTATGCT 1370
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1431 GGGCATCGGAGTCAAGAACTCATTGATCATGCTTGGTGTCATTAACTTTGTTGGTATGCT 1490
Query 1371 CTTCACCTTCCTCGTCCCTGAGCCCAAAGGCAAGTCCCTTGAAGAACTCTCCGGCGAGGC 1430
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1491 CTTCACCTTCCTCGTCCCTGAGCCCAAGGGCAAGTCCCTTGAAGAACTCTCCGGCGAGGC 1550
Query 1431 TGAGGTTGATAAATGA 1446
||||||||||||||||
Sbjct 1551 TGAGGTTGATAAATGA 1566
Score = 538 bits (291), Expect = 6e-152
Identities = 329/347 (95%), Gaps = 3/347 (1%)
Strand=Plus/Plus
Query 22 ATGGCCGATCAACAGCTAGGAGTGCTAAAGGCACTTGATGTTGCAAAGACGCAACTTTAC 81
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1 ATGGCCGATCAACAGCTAGGAGTGCTAAAGGCACTTGATGTTGCGAAGACGCAACTTTAC 60
Query 82 CATTTCACGGCGATTGTCATCGCCGGTATGGGTTTCTTTACGGACGCCTACGATCTCTTT 141
||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct 61 CATTTCACGGCTATTGTCATTGCCGGTATGGGCTTCTTTACGGACGCGTACGATCTCTTT 120
Query 142 TGTGTTTCCTTGGTCACCAAGCTTCTTGGCCGCCTCTACTACTTCAATCCAGCGTCAGAA 201
||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||| |
Sbjct 121 TGTGTGTCCTTGGTGACCAAGCTTCTTGGCCGCCTCTACTACTTCAATCCAACGTCAGCA 180
Query 202 AAGCCTGGCTCACTTCCCCCTCATGTTGCGGCTGCAGTCAACGGTGTGGCCCTTTGTGGA 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 AAGCCTGGCTCACTTCCCCCTCATGTTGCGGCTGCAGTCAACGGTGTGGCCCTTTGTGGA 240
Query 262 ACCCTTGCTGGTCAGCTCTTCTTCGGATGGCTCGGTGAACAA-CTTGGACGGAAAAAAGT 320
|||||||| ||||| ||||||||||||||||| ||||| ||| || ||||||||||| ||
Sbjct 241 ACCCTTGCCGGTCAACTCTTCTTCGGATGGCTTGGTGA-CAAACTCGGACGGAAAAAGGT 299
Query 321 GTACGGTATCACTTTGATCATGATGATTGT-TGCTCAGTTGCTTCCG 366
|||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 300 GTACGGTATCACTTTGATCATGATGATTCTCTGCTCAGTTGCTTCCG 346
> AT5G43350.1 | Symbols: ATPT1, PHT1;1 | phosphate transporter
1;1 | chr5:17399789-17401949 REVERSE LENGTH=1783
Length=1783
Score = 1277 bits (691), Expect = 0.0
Identities = 962/1091 (88%), Gaps = 26/1091 (2%)
Strand=Plus/Plus
Query 366 GAAGACTCGTGGGGCTTTCATCGCGGCAGTGTTCGCTATGCAAGGTGTAGGTATCTTGGC 425
|||||| ||||||||||||||||| || || ||||| ||||||||||| |||||||||||
Sbjct 553 GAAGACCCGTGGGGCTTTCATCGCAGCTGTCTTCGCCATGCAAGGTGTCGGTATCTTGGC 612
Query 426 GGGAGGTTTTGTGGCACTCGCAGTGTCTTCTATATTCGACAAAAAGTTCCCATCGCCGAC 485
|||||||| |||||||||||||| ||||||||||||||||||||||||||| | || ||
Sbjct 613 TGGAGGTTTCGTGGCACTCGCAGTATCTTCTATATTCGACAAAAAGTTCCCAGCTCCAAC 672
Query 486 GTATGC-CCAAGACAGGATTCTCTCAACGCCTCCTCAAGCTGATTACATTTGGCGAATCA 544
||||| || ||||| ||||||||||||||||||| ||| ||||||||||||||||
Sbjct 673 ATATGCAGTAA-ACAGGGCCCTCTCAACGCCTCCTCAAGTTGACTACATTTGGCGAATCA 731
Query 545 TTGTCATGTTTGGCGCTTTACCCGCGGCTTTGACCTACTACTGGCGTATGAAGATGCCTG 604
| ||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct 732 TCGTCATGTTTGGTGCTTTACCCGCAGCTTTGACTTACTACTGGCGTATGAAGATGCCTG 791
Query 605 AAACTGCCCGCTACACTGCTTTAGTTGCCAAGAACATTAAGA-AAGCCACA-CAAGACAT 662
|||||||||| ||||| ||||| |||||||||||||| || | |||||||| | |||||
Sbjct 792 AAACTGCCCGTTACACCGCTTTGGTTGCCAAGAACATCAA-ACAAGCCACAGC-CGACAT 849
Query 663 GTCCAAGGTCTTACAAGTGGATCTTGAGGTTGAAGAAA--G-GG-CG--GA-G-----GA 710
|||||||||||||||| ||| | ||| |||| |||| | || | || | ||
Sbjct 850 GTCCAAGGTCTTACAAACAGATATCGAGCTTGAGGAAAGGGTGGAGGATGACGTCAAAGA 909
Query 711 CCCCAAACTAAACTATGGCTTGTTCTCCAAGGAATTCCTTAGACGCCATGGGCTTCATCT 770
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 910 CCCCAAACAAAACTATGGCTTGTTCTCCAAGGAATTCCTTAGACGCCATGGGCTTCATCT 969
Query 771 CCTTGGGACTACCTCCACTTGGTTTTTGCTTGACATCGCCTTCTACAGCCAAAACTTGTT 830
|||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 970 CCTTGGAACTACCTCCACATGGTTTTTGCTTGACATTGCCTTCTACAGCCAAAACTTGTT 1029
Query 831 CCAAAAGGATATTTTCTCGGCCATTGGATGGATCCCAAAGGCAGCCACTATGAACGCCAT 890
||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 1030 CCAGAAGGATATTTTCTCGGCCATCGGATGGATCCCAAAGGCAGCCACCATGAACGCCAC 1089
Query 891 CCATGAGGTTTTCAAGATTGCTAAGGCTCAGACTCTCATTGCCCTTTGCAGTACAGTCCC 950
|||||||||||||| |||||||| |||||||||||| || ||||||||||||||||||||
Sbjct 1090 CCATGAGGTTTTCAGGATTGCTAGGGCTCAGACTCTTATCGCCCTTTGCAGTACAGTCCC 1149
Query 951 AGGTTACTGGTTCACGGTTGCTTTTATTGATATCATTGGAAGGTTTGCGATCCAACTAA- 1009
||| ||||||||||| ||||| |||||||||| ||||||||||||| |||||||||||
Sbjct 1150 AGGCTACTGGTTCACAGTTGCGTTTATTGATACCATTGGAAGGTTTAAGATCCAACTAAA 1209
Query 1010 TGGGATTCTTTT-TCATGACGGTCTTTATGTTCGCCATTGCCTTCCCATACAACCACTGG 1068
||| ||| ||| | ||||| || |||||||| |||||||||||||| ||||||||||||
Sbjct 1210 TGG-ATT-TTTCATGATGACCGTGTTTATGTTTGCCATTGCCTTCCCTTACAACCACTGG 1267
Query 1069 ATTTTACCAGATAATCGTATCGGATTCGTGGTTATGTACTCACTCACATTT-TTCTTCGC 1127
|| |||||| || ||||||||||| |||||||||||||| || || ||| ||||||||
Sbjct 1268 ATCAAACCAGAAAACCGTATCGGATTTGTGGTTATGTACTCTCTTAC-TTTCTTCTTCGC 1326
Query 1128 CAACTTTGGACCCAATGCAACCACTTTCATTGTCCCAGCTGAAATCTTTCCGGCCAGGCT 1187
||| ||||| || |||||||||||||| |||||||| ||||| || || |||||||||||
Sbjct 1327 CAATTTTGGTCCAAATGCAACCACTTTTATTGTCCCTGCTGAGATATTCCCGGCCAGGCT 1386
Query 1188 TAGATCTACGTGCCATGGAATATCAGCCGCGACAGGTAAGGCTGGAGCTATCGTTGGAGC 1247
|| ||||| || |||||||||||||||||| | |||||||||||||| || ||||||||
Sbjct 1387 AAGGTCTACATGTCATGGAATATCAGCCGCGGCTGGTAAGGCTGGAGCCATTGTTGGAGC 1446
Query 1248 CTTCGGGTTCTTATATGCTGCTCAACCACAGGATAAGACCAAGACAGACGCAGGATACCC 1307
||| |||||| ||||||| |||||| |||| || ||| ||||| |||||||||||||||
Sbjct 1447 CTTTGGGTTCCTATATGCGGCTCAATCACAAGACAAGGCCAAGGTAGACGCAGGATACCC 1506
Query 1308 ACCGGGCATCGGAGTCAAGAACTCACTGATCATGCTTGGTGT-CATTAACTTTGTTGGTA 1366
||| ||||||||||| ||||||||| |||||||||||||||| | |||||||| | ||||
Sbjct 1507 ACCAGGCATCGGAGTTAAGAACTCATTGATCATGCTTGGTGTTC-TTAACTTTATCGGTA 1565
Query 1367 TGCTCTTCACCTTCCTCGTCCCTGAGCCCAAAGGCAAGTCCCTTGAAGAACTCTCCGGCG 1426
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||| || |
Sbjct 1566 TGCTCTTCACCTTCCTTGTCCCAGAGCCCAAAGGCAAGTCCCTTGAAGAACTCTCTGGTG 1625
Query 1427 AGGCTGAGGTT 1437
|||||||||||
Sbjct 1626 AGGCTGAGGTT 1636
Score = 435 bits (235), Expect = 8e-121
Identities = 310/346 (90%), Gaps = 5/346 (1%)
Strand=Plus/Plus
Query 22 ATGGCCGATCAACAGCTAGGAGTGCTAAAGGCACTTGATGTTGCAAAGACGCAACTTTAC 81
|||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 80 ATGGCCGAACAACAACTAGGAGTGCTAAAGGCACTCGATGTTGCGAAGACGCAACTTTAT 139
Query 82 CATTTCACGGCGATTGTCATCGCCGGTATGGGTTTCTTTACGGACGCCTACGATCTCTTT 141
||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||
Sbjct 140 CATTTCACGGCGATTGTCATCGCCGGTATGGGTTTCTTTACCGATGCCTACGATCTTTTT 199
Query 142 TGTGTTTCCTTGGTCACCAAGCTTCTTGGCCGCCTCTACTACTTCAATCCAGCGTCAGAA 201
|| || |||||||| || || || ||||||||| ||||||| |||||||| | |||||
Sbjct 200 TGCGTGTCCTTGGTGACGAAACTCCTTGGCCGCATCTACTATTTCAATCCGGAGTCAGCG 259
Query 202 AAGCCTGGCTCACTTCCCCCTCATGTTGCGGCTGCAGTCAACGGTGTGGCCCTTTGTGGA 261
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 260 AAGCCTGGCTCACTTCCCCCTCATGTTGCGGCCGCGGTCAACGGTGTGGCCCTTTGTGGA 319
Query 262 ACCCTTGCTGGTCAGCTCTTCTTCGGATGGCTCGGTGAACAA-CTTGGACGGAAAAAAGT 320
|||||| ||||||| ||||||||||| ||||||||||| ||| || ||||||||||||||
Sbjct 320 ACCCTTTCTGGTCAACTCTTCTTCGGTTGGCTCGGTGA-CAAACTCGGACGGAAAAAAGT 378
Query 321 GTACGGTATCACTTTGATCATGATGAT-T-GTTGCTCAGTTGCTTC 364
||||||| |||||||| | |||||||| | || |||| || |||||
Sbjct 379 GTACGGTCTCACTTTGGTAATGATGATCTTGT-GCTCTGTCGCTTC 423
> AT5G43370.1 | Symbols: APT1, PHT2, PHT1;2 | phosphate transporter
2 | chr5:17415772-17417798 FORWARD LENGTH=1621
Length=1621
Score = 1216 bits (658), Expect = 0.0
Identities = 952/1092 (87%), Gaps = 28/1092 (3%)
Strand=Plus/Plus
Query 366 GAAGACTCGTGGGGCTTTCATCGCGGCAGTGTTCGCTATGCAAGGTGTAGGTATCTTGGC 425
|||||| ||||||||||||||||| || || ||||| ||||||||||| |||||||||||
Sbjct 520 GAAGACCCGTGGGGCTTTCATCGCAGCTGTCTTCGCCATGCAAGGTGTCGGTATCTTGGC 579
Query 426 GGGAGGTTTTGTGGCACTCGCAGTGTCTTCTATATTCGACAAAAAGTTCCCATCGCCGAC 485
|||||||| |||||||||||||| ||||||||||||||||||||||||||| | || ||
Sbjct 580 TGGAGGTTTCGTGGCACTCGCAGTATCTTCTATATTCGACAAAAAGTTCCCAGCTCCAAC 639
Query 486 GTATGC-CCAAGACAGGATTCTCTCAACGCCTCCTCAAGCTGATTACATTTGGCGAATCA 544
||||| || ||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct 640 ATATGCAGTAA-ACAGGGCCCTCTCAACGCCTCCTCAAGTTGATTACATTTGGCGAATCA 698
Query 545 TTGTCATGTTTGGCGCTTTACCCGCGGCTTTGACCTACTACTGGCGTATGAAGATGCCTG 604
| ||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct 699 TCGTCATGTTTGGTGCTTTACCCGCAGCTTTGACTTACTACTGGCGTATGAAGATGCCTG 758
Query 605 AAACTGCCCGCTACACTGCTTTAGTTGCCAAGAACATTAAGA-AAGCCACA-CAAGACAT 662
|||||||||| ||||| ||||| |||||||||||||| || | |||||||| | |||||
Sbjct 759 AAACTGCCCGTTACACCGCTTTGGTTGCCAAGAACATCAA-ACAAGCCACAGC-CGACAT 816
Query 663 GTCCAAGGTCTTACAAGTGGATCTTGAGGTTGAAGAAA--G-GG-CG--GA-G-----GA 710
|||||||||||||||| ||| | ||| |||| |||| | || | || | ||
Sbjct 817 GTCCAAGGTCTTACAAACAGATATCGAGCTTGAGGAAAGGGTGGAGGATGACGTCAAAGA 876
Query 711 CCCCAAACTAAACTATGGCTTGTTCTCCAAGGAATTCCTTAGACGCCATGGGCTTCATCT 770
||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 877 CCCCAGACAAAACTATGGCTTGTTCTCCAAGGAATTCCTTAGACGCCATGGACTTCATCT 936
Query 771 CCTTGGGACTACCTCCACTTGGTTTTTGCTTGACATCGCCTTCTACAGCCAAAACTTGTT 830
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 937 CCTTGGAACTACCTCCACTTGGTTTTTGCTTGACATTGCCTTCTACAGCCAAAACTTGTT 996
Query 831 CCAAAAGGATATTTTCTCGGCCATTGGATGGATCCCAAAGGCAGCCACTATGAACGCCAT 890
||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 997 CCAGAAGGATATTTTCTCGGCCATCGGATGGATCCCAAAGGCAGCCACCATGAACGCCAC 1056
Query 891 CCATGAGGTTTTCAAGATTGCTAAGGCTCAGACTCTCATTGCCCTTTGCAGTACAGTCCC 950
|||||||||||||| |||||||| |||||||||||| || ||||||||||||||||||||
Sbjct 1057 CCATGAGGTTTTCAGGATTGCTAGGGCTCAGACTCTTATCGCCCTTTGCAGTACAGTCCC 1116
Query 951 AGGTTACTGGTTCACGGTTGCTTTTATTGATATCATTGGAAGGTTTGCGATCCAACTAA- 1009
||| ||||||||||| ||||| |||||||||| ||||||||||||| |||||||||||
Sbjct 1117 AGGCTACTGGTTCACAGTTGCGTTTATTGATACCATTGGAAGGTTTAAGATCCAACTAAA 1176
Query 1010 TGGGATTCTTTT-TCATGACGGTCTTTATGTTCGCCATTGCCTTCCCATACAACCACTGG 1068
||| ||| ||| | ||||| || |||||||| |||||||||||||| ||||||||||||
Sbjct 1177 TGG-ATT-TTTCATGATGACCGTGTTTATGTTTGCCATTGCCTTCCCTTACAACCACTGG 1234
Query 1069 ATTTTACCAGATAATCGTATCGGATTCGTGGTTATGTACTCACTCACATTT-TTCTTCGC 1127
|| |||||| || ||||||||||| |||||||||||||| || || ||| ||||||||
Sbjct 1235 ATCAAACCAGAAAACCGTATCGGATTTGTGGTTATGTACTCTCTTAC-TTTCTTCTTCGC 1293
Query 1128 CAACTTTGGACCCAATGCAACCACTTTCATTGTCCCAGCTGAAATCTTTCCGGCCAGGCT 1187
||| ||||| || |||||||||||||| |||||||| ||||| || || |||||||||||
Sbjct 1294 CAATTTTGGTCCAAATGCAACCACTTTTATTGTCCCTGCTGAGATATTCCCGGCCAGGCT 1353
Query 1188 TAGATCTACGTGCCATGGAATATCAGCCGCGACAGGTAAGGCTGGAGCTATCGTTGGAGC 1247
|| || || || |||||||||||||||||| | |||||||||||||| ||| |||||||
Sbjct 1354 AAGGTCAACATGTCATGGAATATCAGCCGCGGCTGGTAAGGCTGGAGCCATCATTGGAGC 1413
Query 1248 CTTCGGGTTCTTATATGCTGCTCAACCA-CAGGATAAGACCAAGACAGACGCAGGATACC 1306
|||||||||||||||||| |||||| | || || ||| | ||| || ||||||||||
Sbjct 1414 CTTCGGGTTCTTATATGCGGCTCAAA-ATCAAGACAAGGCTAAGGTGGATGCAGGATACC 1472
Query 1307 CACCGGGCATCGGAGTCAAGAACTCACTGATCATGCTTGGTGT-CATTAACTTTGTTGGT 1365
|||| || |||||||| ||||||||| ||||| |||||||||| | ||||||| | |||
Sbjct 1473 CACCAGGTATCGGAGTTAAGAACTCATTGATCGTGCTTGGTGTTC-TTAACTTCATCGGT 1531
Query 1366 ATGCTCTTCACCTTCCTCGTCCCTGAGCCCAAAGGCAAGTCCCTTGAAGAACTCTCCGGC 1425
||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||| ||
Sbjct 1532 ATGCTCTTCACCTTCCTTGTCCCAGAGCCCAAGGGCAAGTCCCTCGAAGAACTCTCTGGT 1591
Query 1426 GAGGCTGAGGTT 1437
|| ||||| |||
Sbjct 1592 GAAGCTGAAGTT 1603
Score = 462 bits (250), Expect = 4e-129
Identities = 327/364 (90%), Gaps = 6/364 (2%)
Strand=Plus/Plus
Query 4 AGACAAGAGAGGCTTTAGATGGCCGATCAACAGCTAGGAGTGCTAAAGGCACTTGATGTT 63
||||||||||||| ||||||||| || ||||| |||||||||||||||||||| ||||||
Sbjct 30 AGACAAGAGAGGC-TTAGATGGCTGAACAACAACTAGGAGTGCTAAAGGCACTCGATGTT 88
Query 64 GCAAAGACGCAACTTTACCATTTCACGGCGATTGTCATCGCCGGTATGGGTTTCTTTACG 123
|| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 89 GCGAAGACGCAACTTTATCATTTCACGGCGATTGTCATCGCCGGTATGGGTTTCTTTACC 148
Query 124 GACGCCTACGATCTCTTTTGTGTTTCCTTGGTCACCAAGCTTCTTGGCCGCCTCTACTAC 183
|| || |||||||| ||||| || |||||||| || ||||| ||||||||| ||||||||
Sbjct 149 GATGCGTACGATCTTTTTTGCGTGTCCTTGGTAACAAAGCTCCTTGGCCGCATCTACTAC 208
Query 184 TTCAATCCAGCGTCAGAAAAGCCTGGCTCACTTCCCCCTCATGTTGCGGCTGCAGTCAAC 243
|||||||| | ||||| |||||||||||||||||||||||||||||||| || |||||
Sbjct 209 TTCAATCCGGAGTCAGCGAAGCCTGGCTCACTTCCCCCTCATGTTGCGGCCGCTGTCAAT 268
Query 244 GGTGTGGCCCTTTGTGGAACCCTTGCTGGTCAGCTCTTCTTCGGATGGCTCGGTGAACAA 303
|||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||| |||
Sbjct 269 GGTGTGGCCCTTTGTGGAACCCTTTCTGGTCAACTCTTCTTCGGTTGGCTCGGTGA-CAA 327
Query 304 -CTTGGACGGAAAAAAGTGTACGGTATCACTTTGATCATGATGAT-TGT-TGCTCAGTTG 360
|| ||||||||||||||||||||| | ||||||||||||||||| | | ||||| || |
Sbjct 328 ACTCGGACGGAAAAAAGTGTACGGTCTTACTTTGATCATGATGATCT-TATGCTCTGTCG 386
Query 361 CTTC 364
||||
Sbjct 387 CTTC 390
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 72338985345
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5