BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg951752

Length=364
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G23970.1 | Symbols:  | Class I glutamine amidotransferase-li...   521    1e-147


> AT2G23970.1 | Symbols:  | Class I glutamine amidotransferase-like 
superfamily protein | chr2:10199698-10201081 FORWARD LENGTH=756
Length=756

 Score =  521 bits (282),  Expect = 1e-147
 Identities = 304/315 (97%), Gaps = 0/315 (0%)
 Strand=Plus/Plus

Query  24   ATGGTTAATGAGCAAAAGAGATTTGCTTTGTTTCTTGCCACAAGCGATTCAACGTTCGTG  83
            |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct  1    ATGGTTAATGAGCAAAAGAGATTTGCTTTGTTTCTTGCTACGAGCGATTCAACGTTCGTG  60

Query  84   AAGAAAACGTATGGAGGATATTTCAACGTGTTTGTTTCGACTTTTGGTGAAGATGGTGAG  143
            |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct  61   AAGAAAGCGTATGGAGGCTATTTCAACGTGTTTGTTTCGACTTTTGGTGAAGATGGTGAG  120

Query  144  CAATGGGATCTGTTTCGAGTGATCGACGGTGAGTTTCCGGACGATAAGGATCTGGATAAG  203
            ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct  121  CAATGGGATCTGTTTCGAGTGATCGACGGCGAGTTTCCTGACGATAAGGATCTGGATAAG  180

Query  204  TACGACGGTTTTGTTATCAGTGGAAGCCTTCATGATGCTTTTGGTGATGATGATTGGATC  263
            ||||| ||||||||||| |||||||||||| | |||||||||||||||||||||||||||
Sbjct  181  TACGATGGTTTTGTTATTAGTGGAAGCCTTAACGATGCTTTTGGTGATGATGATTGGATC  240

Query  264  GTTAAGCTTTGTTCTCTTTGCCAAAAACTTGACGACATGAAGAAGAAGGTTCTTGGTATC  323
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct  241  GTTAAGCTTTGTTCTCTTTGCCAAAAGCTTGACGACATGAAGAAGAAGGTTCTTGGTATC  300

Query  324  TGCTTTGGCCACCAG  338
            |||||||||||||||
Sbjct  301  TGCTTTGGCCACCAG  315



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 17091034660


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5